质粒名称: | NG-ABEmax |
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出品公司: | 爱迪基因 |
目录编号: | 124163 |
存储实验室: | David Liu |
载体骨架基本信息 |
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载体名称: | pCMV |
载体出品公司: | -- |
载体抗性: | 氨苄青霉素 |
空载体大小: | -- |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 哺乳细胞表达 |
筛选标记: | -- |
高拷贝/低拷贝: | -- |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | TadA-TadA(evo)-Cas9-NG |
物种来源: | -- |
插入大小: | -- |
基因突变: | -- |
GenBank编号 | -- |
启动子 | -- |
标签/融合蛋白: | -- |
克隆方法: | -- |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | -- |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | NG-ABEmax was a gift from David Liu (Addgene plasmid # 124163 ; http://n2t.net/addgene:124163 ; RRID:Addgene_124163) |
参考文献部分: | Circularly permuted and PAM-modified Cas9 variants broaden the targeting scope of base editors. Huang TP, Zhao KT, Miller SM, Gaudelli NM, Oakes BL, Fellmann C, Savage DF, Liu DR. Nat Biotechnol. 2019 May 20. pii: 10.1038/s41587-019-0134-y. doi: 10.1038/s41587-019-0134-y. 10.1038/s41587-019-0134-y PubMed 31110355 |
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NGABEmax载体基本信息
NGABEmax载体图谱质粒图谱和多克隆位点信息
NGABEmax载体简介
NGABEmax载体序列
LOCUS NG-ABEmax 8811 bp ds-DNA circular SYN 09-APR-2019 DEFINITION A-to-G base editor. ACCESSION . VERSION . KEYWORDS NG-ABEmax SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 8811) TITLE Liu lab base editing plasmids JOURNAL Unpublished REFERENCE 2 (bases 1 to 8811) AUTHORS . TITLE Direct Submission JOURNAL Exported Apr 9, 2019 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..8811 /organism="synthetic DNA construct" /mol_type="other DNA" enhancer 155..534 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 535..738 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 689..709 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" primer_bind 780..799 /label=T7 /note="T7 promoter, forward primer" promoter 780..798 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" CDS 848..868 /codon_start=1 /product="nuclear localization signal of SV40 (simian virus 40) large T antigen" /label=SV40 NLS /translation="PKKKRKV" CDS 2057..3772 /codon_start=1 /product="N-terminal portion of Streptococcus pyogenes Cas9 (Zetsche et al., 2015)" /label=Cas9(N) /translation="DKKYSIGLAIGTNSVGWAVITDEYKVPSKKFKVLGNTDRHSIKKN LIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESF LVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKF RGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLE NLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQI GDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKRYDEHHQDLTLLKALVRQ QLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLR KQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGN SRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYF TVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIE" CDS 6200..6220 /codon_start=1 /product="nuclear localization signal of SV40 (simian virus 40) large T antigen" /label=SV40 NLS /translation="PKKKRKV" CDS 6229..6246 /codon_start=1 /product="6xHis affinity tag" /label=6xHis /translation="HHHHHH" primer_bind complement(6269..6286) /label=BGH-rev /note="Bovine growth hormone terminator, reverse primer. Also called BGH reverse" polyA_signal 6275..6499 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" primer_bind complement(6570..6586) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(6570..6586) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(6583..6605) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 6594..6610 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(6618..6648) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 6663..6684 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(6801..6818) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(6972..7560) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(7052..7071) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(7731..8591) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 8354..8373 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(8592..8696) /gene="bla" /label=AmpR promoter primer_bind complement(8775..8794) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" ORIGIN 1 ctgctccctg cttgtgtgtt ggaggtcgct gagtagtgcg cgagcaaaat ttaagctaca 61 acaaggcaag gcttgaccga caattgcatg aagaatctgc ttagggttag gcgttttgcg 121 ctgcttcgcg atgtacgggc cagatatacg cgttgacatt gattattgac tagttattaa 181 tagtaatcaa ttacggggtc attagttcat agcccatata tggagttccg cgttacataa 241 cttacggtaa atggcccgcc tggctgaccg cccaacgacc cccgcccatt gacgtcaata 301 atgacgtatg ttcccatagt aacgccaata gggactttcc attgacgtca atgggtggag 361 tatttacggt aaactgccca cttggcagta catcaagtgt atcatatgcc aagtacgccc 421 cctattgacg tcaatgacgg taaatggccc gcctggcatt atgcccagta catgacctta 481 tgggactttc ctacttggca gtacatctac gtattagtca tcgctattac catggtgatg 541 cggttttggc agtacatcaa tgggcgtgga tagcggtttg actcacgggg atttccaagt 601 ctccacccca ttgacgtcaa tgggagtttg ttttggcacc aaaatcaacg ggactttcca 661 aaatgtcgta acaactccgc cccattgacg caaatgggcg gtaggcgtgt acggtgggag 721 gtctatataa gcagagctgg tttagtgaac cgtcagatcc gctagagatc cgcggccgct 781 aatacgactc actataggga gagccgccac catgaaacgg acagccgacg gaagcgagtt 841 cgagtcacca aagaagaagc ggaaagtctc tgaagtcgag tttagccacg agtattggat 901 gaggcacgca ctgaccctgg caaagcgagc atgggatgaa agagaagtcc ccgtgggcgc 961 cgtgctggtg cacaacaata gagtgatcgg agagggatgg aacaggccaa tcggccgcca 1021 cgaccctacc gcacacgcag agatcatggc actgaggcag ggaggcctgg tcatgcagaa 1081 ttaccgcctg atcgatgcca ccctgtatgt gacactggag ccatgcgtga tgtgcgcagg 1141 agcaatgatc cacagcagga tcggaagagt ggtgttcgga gcacgggacg ccaagaccgg 1201 cgcagcaggc tccctgatgg atgtgctgca ccaccccggc atgaaccacc gggtggagat 1261 cacagaggga atcctggcag acgagtgcgc cgccctgctg agcgatttct ttagaatgcg 1321 gagacaggag atcaaggccc agaagaaggc acagagctcc accgactctg gaggatctag 1381 cggaggatcc tctggaagcg agacaccagg cacaagcgag tccgccacac cagagagctc 1441 cggcggctcc tccggaggat cctctgaggt ggagttttcc cacgagtact ggatgagaca 1501 tgccctgacc ctggccaaga gggcacgcga tgagagggag gtgcctgtgg gagccgtgct 1561 ggtgctgaac aatagagtga tcggcgaggg ctggaacaga gccatcggcc tgcacgaccc 1621 aacagcccat gccgaaatta tggccctgag acagggcggc ctggtcatgc agaactacag 1681 actgattgac gccaccctgt acgtgacatt cgagccttgc gtgatgtgcg ccggcgccat 1741 gatccactct aggatcggcc gcgtggtgtt tggcgtgagg aacgcaaaaa ccggcgccgc 1801 aggctccctg atggacgtgc tgcactaccc cggcatgaat caccgcgtcg aaattaccga 1861 gggaatcctg gcagatgaat gtgccgccct gctgtgctat ttctttcgga tgcctagaca 1921 ggtgttcaat gctcagaaga aggcccagag ctccaccgac tccggaggat ctagcggagg 1981 ctcctctggc tctgagacac ctggcacaag cgagagcgca acacctgaaa gcagcggggg 2041 cagcagcggg gggtcagaca agaagtacag catcggcctg gccatcggca ccaactctgt 2101 gggctgggcc gtgatcaccg acgagtacaa ggtgcccagc aagaaattca aggtgctggg 2161 caacaccgac cggcacagca tcaagaagaa cctgatcgga gccctgctgt tcgacagcgg 2221 cgaaacagcc gaggccaccc ggctgaagag aaccgccaga agaagataca ccagacggaa 2281 gaaccggatc tgctatctgc aagagatctt cagcaacgag atggccaagg tggacgacag 2341 cttcttccac agactggaag agtccttcct ggtggaagag gataagaagc acgagcggca 2401 ccccatcttc ggcaacatcg tggacgaggt ggcctaccac gagaagtacc ccaccatcta 2461 ccacctgaga aagaaactgg tggacagcac cgacaaggcc gacctgcggc tgatctatct 2521 ggccctggcc cacatgatca agttccgggg ccacttcctg atcgagggcg acctgaaccc 2581 cgacaacagc gacgtggaca agctgttcat ccagctggtg cagacctaca accagctgtt 2641 cgaggaaaac cccatcaacg ccagcggcgt ggacgccaag gccatcctgt ctgccagact 2701 gagcaagagc agacggctgg aaaatctgat cgcccagctg cccggcgaga agaagaatgg 2761 cctgttcgga aacctgattg ccctgagcct gggcctgacc cccaacttca agagcaactt 2821 cgacctggcc gaggatgcca aactgcagct gagcaaggac acctacgacg acgacctgga 2881 caacctgctg gcccagatcg gcgaccagta cgccgacctg tttctggccg ccaagaacct 2941 gtccgacgcc atcctgctga gcgacatcct gagagtgaac accgagatca ccaaggcccc 3001 cctgagcgcc tctatgatca agagatacga cgagcaccac caggacctga ccctgctgaa 3061 agctctcgtg cggcagcagc tgcctgagaa gtacaaagag attttcttcg accagagcaa 3121 gaacggctac gccggctaca ttgacggcgg agccagccag gaagagttct acaagttcat 3181 caagcccatc ctggaaaaga tggacggcac cgaggaactg ctcgtgaagc tgaacagaga 3241 ggacctgctg cggaagcagc ggaccttcga caacggcagc atcccccacc agatccacct 3301 gggagagctg cacgccattc tgcggcggca ggaagatttt tacccattcc tgaaggacaa 3361 ccgggaaaag atcgagaaga tcctgacctt ccgcatcccc tactacgtgg gccctctggc 3421 caggggaaac agcagattcg cctggatgac cagaaagagc gaggaaacca tcaccccctg 3481 gaacttcgag gaagtggtgg acaagggcgc ttccgcccag agcttcatcg agcggatgac 3541 caacttcgat aagaacctgc ccaacgagaa ggtgctgccc aagcacagcc tgctgtacga 3601 gtacttcacc gtgtataacg agctgaccaa agtgaaatac gtgaccgagg gaatgagaaa 3661 gcccgccttc ctgagcggcg agcagaaaaa ggccatcgtg gacctgctgt tcaagaccaa 3721 ccggaaagtg accgtgaagc agctgaaaga ggactacttc aagaaaatcg agtgcttcga 3781 ctccgtggaa atctccggcg tggaagatcg gttcaacgcc tccctgggca cataccacga 3841 tctgctgaaa attatcaagg acaaggactt cctggacaat gaggaaaacg aggacattct 3901 ggaagatatc gtgctgaccc tgacactgtt tgaggacaga gagatgatcg aggaacggct 3961 gaaaacctat gcccacctgt tcgacgacaa agtgatgaag cagctgaagc ggcggagata 4021 caccggctgg ggcaggctga gccggaagct gatcaacggc atccgggaca agcagtccgg 4081 caagacaatc ctggatttcc tgaagtccga cggcttcgcc aacagaaact tcatgcagct 4141 gatccacgac gacagcctga cctttaaaga ggacatccag aaagcccagg tgtccggcca 4201 gggcgatagc ctgcacgagc acattgccaa tctggccggc agccccgcca ttaagaaggg 4261 catcctgcag acagtgaagg tggtggacga gctcgtgaaa gtgatgggcc ggcacaagcc 4321 cgagaacatc gtgatcgaaa tggccagaga gaaccagacc acccagaagg gacagaagaa 4381 cagccgcgag agaatgaagc ggatcgaaga gggcatcaaa gagctgggca gccagatcct 4441 gaaagaacac cccgtggaaa acacccagct gcagaacgag aagctgtacc tgtactacct 4501 gcagaatggg cgggatatgt acgtggacca ggaactggac atcaaccggc tgtccgacta 4561 cgatgtggac catatcgtgc ctcagagctt tctgaaggac gactccatcg acaacaaggt 4621 gctgaccaga agcgacaaga accggggcaa gagcgacaac gtgccctccg aagaggtcgt 4681 gaagaagatg aagaactact ggcggcagct gctgaacgcc aagctgatta cccagagaaa 4741 gttcgacaat ctgaccaagg ccgagagagg cggcctgagc gaactggata aggccggctt 4801 catcaagaga cagctggtgg aaacccggca gatcacaaag cacgtggcac agatcctgga 4861 ctcccggatg aacactaagt acgacgagaa tgacaagctg atccgggaag tgaaagtgat 4921 caccctgaag tccaagctgg tgtccgattt ccggaaggat ttccagtttt acaaagtgcg 4981 cgagatcaac aactaccacc acgcccacga cgcctacctg aacgccgtcg tgggaaccgc 5041 cctgatcaaa aagtacccta agctggaaag cgagttcgtg tacggcgact acaaggtgta 5101 cgacgtgcgg aagatgatcg ccaagagcga gcaggaaatc ggcaaggcta ccgccaagta 5161 cttcttctac agcaacatca tgaacttttt caagaccgag attaccctgg ccaacggcga 5221 gatccggaag cggcctctga tcgagacaaa cggcgaaacc ggggagatcg tgtgggataa 5281 gggccgggat tttgccaccg tgcggaaagt gctgagcatg ccccaagtga atatcgtgaa 5341 aaagaccgag gtgcagacag gcggcttcag caaagagtct atcaggccca agaggaacag 5401 cgataagctg atcgccagaa agaaggactg ggaccctaag aagtacggcg gcttcgtcag 5461 ccccaccgtg gcctattctg tgctggtggt ggccaaagtg gaaaagggca agtccaagaa 5521 actgaagagt gtgaaagagc tgctggggat caccatcatg gaaagaagca gcttcgagaa 5581 gaatcccatc gactttctgg aagccaaggg ctacaaagaa gtgaaaaagg acctgatcat 5641 caagctgcct aagtactccc tgttcgagct ggaaaacggc cggaagagaa tgctggcctc 5701 tgccagattc ctgcagaagg gaaacgaact ggccctgccc tccaaatatg tgaacttcct 5761 gtacctggcc agccactatg agaagctgaa gggctccccc gaggataatg agcagaaaca 5821 gctgtttgtg gaacagcaca agcactacct ggacgagatc atcgagcaga tcagcgagtt 5881 ctccaagaga gtgatcctgg ccgacgctaa tctggacaaa gtgctgtccg cctacaacaa 5941 gcaccgggat aagcccatca gagagcaggc cgagaatatc atccacctgt ttaccctgac 6001 caatctggga gcccctaggg ccttcaagta ctttgacacc accatcgacc ggaaggtgta 6061 caggagcacc aaagaggtgc tggacgccac cctgatccac cagagcatca ccggcctgta 6121 cgagacacgg atcgacctgt ctcagctggg aggtgactct ggcggctcaa aaagaaccgc 6181 cgacggcagc gaattcgagc ccaagaagaa gaggaaagtc taaccggtca tcatcaccat 6241 caccattgag tttaaacccg ctgatcagcc tcgactgtgc cttctagttg ccagccatct 6301 gttgtttgcc cctcccccgt gccttccttg accctggaag gtgccactcc cactgtcctt 6361 tcctaataaa atgaggaaat tgcatcgcat tgtctgagta ggtgtcattc tattctgggg 6421 ggtggggtgg ggcaggacag caagggggag gattgggaag acaatagcag gcatgctggg 6481 gatgcggtgg gctctatggc ttctgaggcg gaaagaacca gctggggctc gataccgtcg 6541 acctctagct agagcttggc gtaatcatgg tcatagctgt ttcctgtgtg aaattgttat 6601 ccgctcacaa ttccacacaa catacgagcc ggaagcataa agtgtaaagc ctagggtgcc 6661 taatgagtga gctaactcac attaattgcg ttgcgctcac tgcccgcttt ccagtcggga 6721 aacctgtcgt gccagctgca ttaatgaatc ggccaacgcg cggggagagg cggtttgcgt 6781 attgggcgct cttccgcttc ctcgctcact gactcgctgc gctcggtcgt tcggctgcgg 6841 cgagcggtat cagctcactc aaaggcggta atacggttat ccacagaatc aggggataac 6901 gcaggaaaga acatgtgagc aaaaggccag caaaaggcca ggaaccgtaa aaaggccgcg 6961 ttgctggcgt ttttccatag gctccgcccc cctgacgagc atcacaaaaa tcgacgctca 7021 agtcagaggt ggcgaaaccc gacaggacta taaagatacc aggcgtttcc ccctggaagc 7081 tccctcgtgc gctctcctgt tccgaccctg ccgcttaccg gatacctgtc cgcctttctc 7141 ccttcgggaa gcgtggcgct ttctcatagc tcacgctgta ggtatctcag ttcggtgtag 7201 gtcgttcgct ccaagctggg ctgtgtgcac gaaccccccg ttcagcccga ccgctgcgcc 7261 ttatccggta actatcgtct tgagtccaac ccggtaagac acgacttatc gccactggca 7321 gcagccactg gtaacaggat tagcagagcg aggtatgtag gcggtgctac agagttcttg 7381 aagtggtggc ctaactacgg ctacactaga agaacagtat ttggtatctg cgctctgctg 7441 aagccagtta ccttcggaaa aagagttggt agctcttgat ccggcaaaca aaccaccgct 7501 ggtagcggtg gtttttttgt ttgcaagcag cagattacgc gcagaaaaaa aggatctcaa 7561 gaagatcctt tgatcttttc tacggggtct gacactcagt ggaacgaaaa ctcacgttaa 7621 gggattttgg tcatgagatt atcaaaaagg atcttcacct agatcctttt aaattaaaaa 7681 tgaagtttta aatcaatcta aagtatatat gagtaaactt ggtctgacag ttaccaatgc 7741 ttaatcagtg aggcacctat ctcagcgatc tgtctatttc gttcatccat agttgcctga 7801 ctccccgtcg tgtagataac tacgatacgg gagggcttac catctggccc cagtgctgca 7861 atgataccgc gagacccacg ctcaccggct ccagatttat cagcaataaa ccagccagcc 7921 ggaagggccg agcgcagaag tggtcctgca actttatccg cctccatcca gtctattaat 7981 tgttgccggg aagctagagt aagtagttcg ccagttaata gtttgcgcaa cgttgttgcc 8041 attgctacag gcatcgtggt gtcacgctcg tcgtttggta tggcttcatt cagctccggt 8101 tcccaacgat caaggcgagt tacatgatcc cccatgttgt gcaaaaaagc ggttagctcc 8161 ttcggtcctc cgatcgttgt cagaagtaag ttggccgcag tgttatcact catggttatg 8221 gcagcactgc ataattctct tactgtcatg ccatccgtaa gatgcttttc tgtgactggt 8281 gagtactcaa ccaagtcatt ctgagaatag tgtatgcggc gaccgagttg ctcttgcccg 8341 gcgtcaatac gggataatac cgcgccacat agcagaactt taaaagtgct catcattgga 8401 aaacgttctt cggggcgaaa actctcaagg atcttaccgc tgttgagatc cagttcgatg 8461 taacccactc gtgcacccaa ctgatcttca gcatctttta ctttcaccag cgtttctggg 8521 tgagcaaaaa caggaaggca aaatgccgca aaaaagggaa taagggcgac acggaaatgt 8581 tgaatactca tactcttcct ttttcaatat tattgaagca tttatcaggg ttattgtctc 8641 atgagcggat acatatttga atgtatttag aaaaataaac aaataggggt tccgcgcaca 8701 tttccccgaa aagtgccacc tgacgtcgac ggatcgggag atcgatctcc cgatccccta 8761 gggtcgactc tcagtacaat ctgctctgat gccgcatagt taagccagta t //
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