质粒名称: | miniTurbo-His6_pET21a |
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出品公司: | addgene |
目录编号: | 107178 |
存储实验室: | Alice Ting |
载体骨架基本信息 |
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载体名称: | pET21a |
载体类型: | 细菌细胞表达 |
载体抗性: | 氨苄霉素 |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | 高拷贝 |
插入基因信息 |
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插入基因名称: | miniTurbo (BirA mutant) |
基因突变: | aa1-63 deleted; Q65P, I87V, R118S, E140K, Q141R, S150G, L151P V160A, T192A, K194I, M209V, I305V |
克隆方法: | 限制性内切酶 |
5’克隆位点: | 未知 |
3’克隆位点: | 未知 |
文献引用方法 |
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材料和方法部分: | miniTurbo-His6_pET21a was a gift from Alice Ting (Addgene plasmid # 107178 ; http://n2t.net/addgene:107178 ; RRID:Addgene_107178) |
参考文献部分: | Efficient proximity labeling in living cells and organisms with TurboID. Branon TC, Bosch JA, Sanchez AD, Udeshi ND, Svinkina T, Carr SA, Feldman JL, Perrimon N, Ting AY. Nat Biotechnol. 2018 Aug 20. pii: nbt.4201. doi: 10.1038/nbt.4201. 10.1038/nbt.4201 PubMed 30125270 |
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载体基本信息
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载体简介
载体序列
LOCUS miniTurbo-His6_pET21a 6200 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION expresses His6-tagged miniTurbo in bacteria. ACCESSION . VERSION . KEYWORDS miniTurbo-His6_pET21a SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6200) AUTHORS Branon TC, Bosch JA, Sanchez AD, Udeshi ND, Svinkina T, Carr SA, Feldman JL, Perrimon N, Ting AY TITLE Efficient proximity labeling in living cells and organisms with TurboID. JOURNAL Nat Biotechnol. 2018 Aug 20. pii: nbt.4201. doi: 10.1038/nbt.4201. PUBMED 30125270 REFERENCE 2 (bases 1 to 6200) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.biofeng.com FEATURES Location/Qualifiers source 1..6200 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind 48..67 /label=pBRrevBam /note="pBR322 vectors, tet region, downstream of BamHI, reverse primer" primer_bind 151..170 /label=T7 /note="T7 promoter, forward primer" promoter 151..169 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" protein_bind 170..194 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." RBS 209..231 /note="efficient ribosome binding site from bacteriophage T7 gene 10 (Olins and Rangwala, 1989)" CDS 239..271 /codon_start=1 /product="leader peptide from bacteriophage T7 gene 10" /label=T7 tag (gene 10 leader) /note="promotes efficient translation in E. coli" /translation="MASMTGGQQMG" CDS 290..1060 /codon_start=1 /product="N-terminally truncated mutant of the E. coli biotin ligase BioID engineered for improved catalytic efficiency (Branon et al., 2018)" /label=miniTurbo /translation="IPLLNAKQILGQLDGGSVAVLPVVDSTNQYLLDRIGELKSGDACI AEYQQAGRGSRGRKWFSPFGANLYLSMFWRLKRGPAAIGLGPVIGIVMAEALRKLGADK VRVKWPNDLYLQDRKLAGILVELAGITGDAAQIVIGAGINVAMRRVEESVVNQGWITLQ EAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIF GISRGIDKQGALLLEQDGVIKPWMGGEISLRSAEK" CDS 1082..1099 /codon_start=1 /product="6xHis affinity tag" /label=6xHis /translation="HHHHHH" primer_bind complement(1152..1170) /label=T7 Term /note="T7 terminator, reverse primer" terminator 1166..1213 /label=T7 terminator /note="transcription terminator for bacteriophage T7 RNA polymerase" rep_origin 1250..1705 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(1337..1356) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 1547..1568 /label=F1ori-F /note="F1 origin, forward primer" promoter 1731..1835 /gene="bla" /label=AmpR promoter CDS 1836..2696 /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind complement(2054..2073) /label=Amp-R /note="Ampicillin resistance gene, reverse primer" rep_origin 2867..3455 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 3356..3375 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 3609..3626 /label=L4440 /note="L4440 vector, forward primer" misc_feature 3641..3780 /label=bom /note="basis of mobility region from pBR322" primer_bind complement(3706..3725) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" primer_bind 3866..3888 /label=pGEX 3' /note="pGEX vectors, reverse primer" CDS complement(3882..4073) /codon_start=1 /gene="rop" /product="Rop protein, which maintains plasmids at low copy number" /label=rop /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA DELYRSCLARFGDDGENL" CDS complement(4882..5964) /codon_start=1 /gene="lacI" /product="lac repressor" /label=lacI /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR ALADSLMQLARQVSRLESGQ" primer_bind 5926..5945 /label=LacI-R /note="LacI, reverse primer" promoter complement(5965..6042) /gene="lacI" /label=lacI promoter ORIGIN 1 aaacaagcgc tcatgagccc gaagtggcga gcccgatctt ccccatcggt gatgtcggcg 61 atataggcgc cagcaaccgc acctgtggcg ccggtgatgc cggccacgat gcgtccggcg 121 tagaggatcg agatctcgat cccgcgaaat taatacgact cactataggg gaattgtgag 181 cggataacaa ttcccctcta gaaataattt tgtttaactt taagaaggag atatacatat 241 ggctagcatg actggtggac agcaaatggg tcgcggatcc gaattcatga tcccgctgct 301 gaacgctaaa cagattctgg gacagctgga cggcgggagc gtggcagtcc tgcctgtggt 361 cgactccacc aatcagtacc tgctggatcg aatcggcgag ctgaagagtg gggatgcttg 421 cattgcagaa tatcagcagg cagggagagg aagcagaggg aggaaatggt tctctccttt 481 tggagctaac ctgtacctga gtatgttttg gcgcctgaag cggggaccag cagcaatcgg 541 cctgggcccg gtcatcggaa ttgtcatggc agaagcgctg cgaaagctgg gagcagacaa 601 ggtgcgagtc aaatggccca atgacctgta tctgcaggat agaaagctgg caggcatcct 661 ggtggagctg gccggaataa caggcgatgc tgcacagatc gtcattggcg ccgggattaa 721 cgtggctatg aggcgcgtgg aggaaagcgt ggtcaatcag ggctggatca cactgcagga 781 agcagggatt aacctggaca ggaatactct ggccgctatg ctgatccgag agctgcgggc 841 agccctggaa ctgttcgagc aggaaggcct ggctccatat ctgtcacggt gggagaagct 901 ggataacttc atcaatagac ccgtgaagct gatcattggg gacaaagaga ttttcgggat 961 tagccggggg attgataaac agggagccct gctgctggaa caggacggag ttatcaaacc 1021 ctggatgggc ggagaaatca gtctgcggtc tgccgaaaag aagcttgcgg ccgcactcga 1081 gcaccaccac caccaccact gagatccggc tgctaacaaa gcccgaaagg aagctgagtt 1141 ggctgctgcc accgctgagc aataactagc ataacccctt ggggcctcta aacgggtctt 1201 gaggggtttt ttgctgaaag gaggaactat atccggattg gcgaatggga cgcgccctgt 1261 agcggcgcat taagcgcggc gggtgtggtg gttacgcgca gcgtgaccgc tacacttgcc 1321 agcgccctag cgcccgctcc tttcgctttc ttcccttcct ttctcgccac gttcgccggc 1381 tttccccgtc aagctctaaa tcgggggctc cctttagggt tccgatttag tgctttacgg 1441 cacctcgacc ccaaaaaact tgattagggt gatggttcac gtagtgggcc atcgccctga 1501 tagacggttt ttcgcccttt gacgttggag tccacgttct ttaatagtgg actcttgttc 1561 caaactggaa caacactcaa ccctatctcg gtctattctt ttgatttata agggattttg 1621 ccgatttcgg cctattggtt aaaaaatgag ctgatttaac aaaaatttaa cgcgaatttt 1681 aacaaaatat taacgcttac aatttaggtg gcacttttcg gggaaatgtg cgcggaaccc 1741 ctatttgttt atttttctaa atacattcaa atatgtatcc gctcatgaga caataaccct 1801 gataaatgct tcaataatat tgaaaaagga agagtatgag tattcaacat ttccgtgtcg 1861 cccttattcc cttttttgcg gcattttgcc ttcctgtttt tgctcaccca gaaacgctgg 1921 tgaaagtaaa agatgctgaa gatcagttgg gtgcacgagt gggttacatc gaactggatc 1981 tcaacagcgg taagatcctt gagagttttc gccccgaaga acgttttcca atgatgagca 2041 cttttaaagt tctgctatgt ggcgcggtat tatcccgtat tgacgccggg caagagcaac 2101 tcggtcgccg catacactat tctcagaatg acttggttga gtactcacca gtcacagaaa 2161 agcatcttac ggatggcatg acagtaagag aattatgcag tgctgccata accatgagtg 2221 ataacactgc ggccaactta cttctgacaa cgatcggagg accgaaggag ctaaccgctt 2281 ttttgcacaa catgggggat catgtaactc gccttgatcg ttgggaaccg gagctgaatg 2341 aagccatacc aaacgacgag cgtgacacca cgatgcctgc agcaatggca acaacgttgc 2401 gcaaactatt aactggcgaa ctacttactc tagcttcccg gcaacaatta atagactgga 2461 tggaggcgga taaagttgca ggaccacttc tgcgctcggc ccttccggct ggctggttta 2521 ttgctgataa atctggagcc ggtgagcgtg ggtctcgcgg tatcattgca gcactggggc 2581 cagatggtaa gccctcccgt atcgtagtta tctacacgac ggggagtcag gcaactatgg 2641 atgaacgaaa tagacagatc gctgagatag gtgcctcact gattaagcat tggtaactgt 2701 cagaccaagt ttactcatat atactttaga ttgatttaaa acttcatttt taatttaaaa 2761 ggatctaggt gaagatcctt tttgataatc tcatgaccaa aatcccttaa cgtgagtttt 2821 cgttccactg agcgtcagac cccgtagaaa agatcaaagg atcttcttga gatccttttt 2881 ttctgcgcgt aatctgctgc ttgcaaacaa aaaaaccacc gctaccagcg gtggtttgtt 2941 tgccggatca agagctacca actctttttc cgaaggtaac tggcttcagc agagcgcaga 3001 taccaaatac tgtccttcta gtgtagccgt agttaggcca ccacttcaag aactctgtag 3061 caccgcctac atacctcgct ctgctaatcc tgttaccagt ggctgctgcc agtggcgata 3121 agtcgtgtct taccgggttg gactcaagac gatagttacc ggataaggcg cagcggtcgg 3181 gctgaacggg gggttcgtgc acacagccca gcttggagcg aacgacctac accgaactga 3241 gatacctaca gcgtgagcta tgagaaagcg ccacgcttcc cgaagggaga aaggcggaca 3301 ggtatccggt aagcggcagg gtcggaacag gagagcgcac gagggagctt ccagggggaa 3361 acgcctggta tctttatagt cctgtcgggt ttcgccacct ctgacttgag cgtcgatttt 3421 tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc cagcaacgcg gcctttttac 3481 ggttcctggc cttttgctgg ccttttgctc acatgttctt tcctgcgtta tcccctgatt 3541 ctgtggataa ccgtattacc gcctttgagt gagctgatac cgctcgccgc agccgaacga 3601 ccgagcgcag cgagtcagtg agcgaggaag cggaagagcg cctgatgcgg tattttctcc 3661 ttacgcatct gtgcggtatt tcacaccgca atggtgcact ctcagtacaa tctgctctga 3721 tgccgcatag ttaagccagt atacactccg ctatcgctac gtgactgggt catggctgcg 3781 ccccgacacc cgccaacacc cgctgacgcg ccctgacggg cttgtctgct cccggcatcc 3841 gcttacagac aagctgtgac cgtctccggg agctgcatgt gtcagaggtt ttcaccgtca 3901 tcaccgaaac gcgcgaggca gctgcggtaa agctcatcag cgtggtcgtg aagcgattca 3961 cagatgtctg cctgttcatc cgcgtccagc tcgttgagtt tctccagaag cgttaatgtc 4021 tggcttctga taaagcgggc catgttaagg gcggtttttt cctgtttggt cactgatgcc 4081 tccgtgtaag ggggatttct gttcatgggg gtaatgatac cgatgaaacg agagaggatg 4141 ctcacgatac gggttactga tgatgaacat gcccggttac tggaacgttg tgagggtaaa 4201 caactggcgg tatggatgcg gcgggaccag agaaaaatca ctcagggtca atgccagcgc 4261 ttcgttaata cagatgtagg tgttccacag ggtagccagc agcatcctgc gatgcagatc 4321 cggaacataa tggtgcaggg cgctgacttc cgcgtttcca gactttacga aacacggaaa 4381 ccgaagacca ttcatgttgt tgctcaggtc gcagacgttt tgcagcagca gtcgcttcac 4441 gttcgctcgc gtatcggtga ttcattctgc taaccagtaa ggcaaccccg ccagcctagc 4501 cgggtcctca acgacaggag cacgatcatg cgcacccgtg gggccgccat gccggcgata 4561 atggcctgct tctcgccgaa acgtttggtg gcgggaccag tgacgaaggc ttgagcgagg 4621 gcgtgcaaga ttccgaatac cgcaagcgac aggccgatca tcgtcgcgct ccagcgaaag 4681 cggtcctcgc cgaaaatgac ccagagcgct gccggcacct gtcctacgag ttgcatgata 4741 aagaagacag tcataagtgc ggcgacgata gtcatgcccc gcgcccaccg gaaggagctg 4801 actgggttga aggctctcaa gggcatcggt cgagatcccg gtgcctaatg agtgagctaa 4861 cttacattaa ttgcgttgcg ctcactgccc gctttccagt cgggaaacct gtcgtgccag 4921 ctgcattaat gaatcggcca acgcgcgggg agaggcggtt tgcgtattgg gcgccagggt 4981 ggtttttctt ttcaccagtg agacgggcaa cagctgattg cccttcaccg cctggccctg 5041 agagagttgc agcaagcggt ccacgctggt ttgccccagc aggcgaaaat cctgtttgat 5101 ggtggttaac ggcgggatat aacatgagct gtcttcggta tcgtcgtatc ccactaccga 5161 gatatccgca ccaacgcgca gcccggactc ggtaatggcg cgcattgcgc ccagcgccat 5221 ctgatcgttg gcaaccagca tcgcagtggg aacgatgccc tcattcagca tttgcatggt 5281 ttgttgaaaa ccggacatgg cactccagtc gccttcccgt tccgctatcg gctgaatttg 5341 attgcgagtg agatatttat gccagccagc cagacgcaga cgcgccgaga cagaacttaa 5401 tgggcccgct aacagcgcga tttgctggtg acccaatgcg accagatgct ccacgcccag 5461 tcgcgtaccg tcttcatggg agaaaataat actgttgatg ggtgtctggt cagagacatc 5521 aagaaataac gccggaacat tagtgcaggc agcttccaca gcaatggcat cctggtcatc 5581 cagcggatag ttaatgatca gcccactgac gcgttgcgcg agaagattgt gcaccgccgc 5641 tttacaggct tcgacgccgc ttcgttctac catcgacacc accacgctgg cacccagttg 5701 atcggcgcga gatttaatcg ccgcgacaat ttgcgacggc gcgtgcaggg ccagactgga 5761 ggtggcaacg ccaatcagca acgactgttt gcccgccagt tgttgtgcca cgcggttggg 5821 aatgtaattc agctccgcca tcgccgcttc cactttttcc cgcgttttcg cagaaacgtg 5881 gctggcctgg ttcaccacgc gggaaacggt ctgataagag acaccggcat actctgcgac 5941 atcgtataac gttactggtt tcacattcac caccctgaat tgactctctt ccgggcgcta 6001 tcatgccata ccgcgaaagg ttttgcgcca ttcgatggtg tccgggatct cgacgctctc 6061 ccttatgcga ctcctgcatt aggaagcagc ccagtagtag gttgaggccg ttgagcaccg 6121 ccgccgcaag gaatggtgca tgcaaggaga tggcgcccaa cagtcccccg gccacggggc 6181 ctgccaccat acccacgccg //
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