质粒名称: | p11-LacY-wtx1 |
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出品公司: | 爱迪基因 |
目录编号: | 69056 |
存储实验室: | Huimin Zhao |
载体骨架基本信息 |
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载体名称: | pBAD18 |
载体抗性: | 氨苄青霉素 |
空载体大小: | 4600 bp |
完整质粒大小: | 4600 bp |
筛选标记: | 氨苄青霉素 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | ccdB |
启动子 | pBAD |
克隆方法: | 限制性内切酶 |
5' 克隆位点: | NheI(销毁后未知) |
3' 克隆位点: | SphI(销毁后未知) |
5' 测序引物 | catgca gctagc GGAGTG aaacgatgcagttt aaggtttacacctataaaaga |
3' 测序引物 | agtacg gcatgc cgtatg tctaga ttatattccccaaaacatcaggttaat |
文献引用方法 |
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材料和方法部分: | p11-LacY-wtx1 was a gift from Huimin Zhao (Addgene plasmid # 69056 ; http://n2t.net/addgene:69056 ; RRID:Addgene_69056) |
参考文献部分: | A highly sensitive selection method for directed evolution of homing endonucleases. Chen Z, Zhao H. Nucleic Acids Res. 2005 Oct 6;33(18):e154. 10.1093/nar/gni148 PubMed 16214805 |
买家导航
载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS p11-LacY-wtx1 6092 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION The reporter plasmid p11-LacY-wtx1 encodes the toxin CcdB gene under the inducible BAD promoter and a single copy of the endonuclease cleavage site which is readily extendable to multiple copies.. ACCESSION . VERSION . KEYWORDS p11-LacY-wtx1 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6092) AUTHORS Chen Z, Zhao H TITLE A highly sensitive selection method for directed evolution of homing endonucleases. JOURNAL Nucleic Acids Res. 2005 Oct 6;33(18):e154. PUBMED 16214805 REFERENCE 2 (bases 1 to 6092) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..6092 /organism="synthetic DNA construct" /mol_type="other DNA" CDS complement(95..973) /codon_start=1 /gene="araC" /product="L-arabinose regulatory protein" /label=araC /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY ILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE EKVNDVAVKLS" promoter 1000..1284 /gene="araBAD" /label=araBAD promoter /note="promoter of the L-arabinose operon of E. coli; the araC regulatory gene is transcribed in the opposite direction (Guzman et al., 1995)" primer_bind 1207..1226 /label=pBAD Forward /note="For vectors with E. coli araBAD promoter, forward primer" CDS 1316..1621 /codon_start=1 /gene="ccdB" /product="CcdB, a bacterial toxin that poisons DNA gyrase" /label=ccdB /note="Plasmids containing the ccdB gene cannot be propagated in standard E. coli strains." /translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI" primer_bind 1500..1519 /label=ccdB-fwd /note="ccdB gene, forward primer" primer_bind complement(1716..1733) /label=pBAD Reverse /note="For vectors with E. coli araBAD promoter, reverse primer" terminator 1886..1972 /gene="Escherichia coli rrnB" /label=rrnB T1 terminator /note="transcription terminator T1 from the E. coli rrnB gene" terminator 2064..2091 /label=rrnB T2 terminator /note="transcription terminator T2 from the E. coli rrnB gene" promoter 2110..2201 /gene="bla" /label=AmpR promoter CDS 2202..3062 /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind complement(2420..2439) /label=Amp-R /note="Ampicillin resistance gene, reverse primer" rep_origin 3104..3559 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(3191..3210) /label=F1ori-R /note="F1 origin, reverse primer" rep_origin 3670..4258 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 4159..4178 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 4412..4429 /label=L4440 /note="L4440 vector, forward primer" protein_bind 4594..4615 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." promoter 4630..4660 /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 4668..4684 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 4673..4695 /label=M13/pUC Reverse /note="In lacZ gene" primer_bind 4692..4708 /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind 4692..4708 /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(4724..4741) /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind complement(4724..4740) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" ORIGIN 1 tcgatgcata atgtgcctgt caaatggacg aagcagggat tctgcaaacc ctatgctact 61 ccgtcaagcc gtcaattgtc tgattcgtta ccaattatga caacttgacg gctacatcat 121 tcactttttc ttcacaaccg gcacggaact cgctcgggct ggccccggtg cattttttaa 181 atacccgcga gaaatagagt tgatcgtcaa aaccaacatt gcgaccgacg gtggcgatag 241 gcatccgggt ggtgctcaaa agcagcttcg cctggctgat acgttggtcc tcgcgccagc 301 ttaagacgct aatccctaac tgctggcgga aaagatgtga cagacgcgac ggcgacaagc 361 aaacatgctg tgcgacgctg gcgatatcaa aattgctgtc tgccaggtga tcgctgatgt 421 actgacaagc ctcgcgtacc cgattatcca tcggtggatg gagcgactcg ttaatcgctt 481 ccatgcgccg cagtaacaat tgctcaagca gatttatcgc cagcagctcc gaatagcgcc 541 cttccccttg cccggcgtta atgatttgcc caaacaggtc gctgaaatgc ggctggtgcg 601 cttcatccgg gcgaaagaac cccgtattgg caaatattga cggccagtta agccattcat 661 gccagtaggc gcgcggacga aagtaaaccc actggtgata ccattcgcga gcctccggat 721 gacgaccgta gtgatgaatc tctcctggcg ggaacagcaa aatatcaccc ggtcggcaaa 781 caaattctcg tccctgattt ttcaccaccc cctgaccgcg aatggtgaga ttgagaatat 841 aacctttcat tcccagcggt cggtcgataa aaaaatcgag ataaccgttg gcctcaatcg 901 gcgttaaacc cgccaccaga tgggcattaa acgagtatcc cggcagcagg ggatcatttt 961 gcgcttcagc catacttttc atactcccgc cattcagaga agaaaccaat tgtccatatt 1021 gcatcagaca ttgccgtcac tgcgtctttt actggctctt ctcgctaacc aaaccggtaa 1081 ccccgcttat taaaagcatt ctgtaacaaa gcgggaccaa agccatgaca aaaacgcgta 1141 acaaaagtgt ctataatcac ggcagaaaag tccacattga ttatttgcac ggcgtcacac 1201 tttgctatgc catagcattt ttatccataa gattagcgga tcctacctga cgctttttat 1261 cgcaactctc tactgtttct ccatacccgt ttttttgggc tagcgattga aaacgatgca 1321 gtttaaggtt tacacctata aaagagagag ccgttatcgt ctgtttgtgg atgtacagag 1381 tgatattatt gacacgcccg ggcgacggat ggtgatcccc ctggccagtg cacgtctgct 1441 gtcagataaa gtctcccgtg aactttaccc ggtggtgcat atcggggatg aaagctggcg 1501 catgatgacc accgatatgg ccagtgtgcc ggtctccgtt atcggggaag aagtggctga 1561 tctcagccac cgcgaaaatg acatcaaaaa cgccattaac ctgatgtttt ggggaatata 1621 atctagcatt acgctaggga taacagggta atatcacgct ctagacatac ggcatgcaag 1681 cttggctgtt ttggcggatg agagaagatt ttcagcctga tacagattaa atcagaacgc 1741 agaagcggtc tgataaaaca gaatttgcct ggcggcagta gcgcggtggt cccacctgac 1801 cccatgccga actcagaagt gaaacgccgt agcgccgatg gtagtgtggg gtctccccat 1861 gcgagagtag ggaactgcca ggcatcaaat aaaacgaaag gctcagtcga aagactgggc 1921 ctttcgtttt atctgttgtt tgtcggtgaa cgctctcctg agtaggacaa atccgccggg 1981 agcggatttg aacgttgcga agcaacggcc cggagggtgg cgggcaggac gcccgccata 2041 aactgccagg catcaaatta agcagaaggc catcctgacg gatggccttt ttgcgtttct 2101 acaaactctt ttgtttattt ttctaaatac attcaaatat gtatccgctc atgagacaat 2161 aaccctgata aatgcttcaa taatattgaa aaaggaagag tatgagtatt caacatttcc 2221 gtgtcgccct tattcccttt tttgcggcat tttgccttcc tgtttttgct cacccagaaa 2281 cgctggtgaa agtaaaagat gctgaagatc agttgggtgc acgagtgggt tacatcgaac 2341 tggatctcaa cagcggtaag atccttgaga gttttcgccc cgaagaacgt tttccaatga 2401 tgagcacttt taaagttctg ctatgtggcg cggtattatc ccgtgttgac gccgggcaag 2461 agcaactcgg tcgccgcata cactattctc agaatgactt ggttgagtac tcaccagtca 2521 cagaaaagca tcttacggat ggcatgacag taagagaatt atgcagtgct gccataacca 2581 tgagtgataa cactgcggcc aacttacttc tgacaacgat cggaggaccg aaggagctaa 2641 ccgctttttt gcacaacatg ggggatcatg taactcgcct tgatcgttgg gaaccggagc 2701 tgaatgaagc cataccaaac gacgagcgtg acaccacgat gcctgcagca atggcaacaa 2761 cgttgcgcaa actattaact ggcgaactac ttactctagc ttcccggcaa caattaatag 2821 actggatgga ggcggataaa gttgcaggac cacttctgcg ctcggccctt ccggctggct 2881 ggtttattgc tgataaatct ggagccggtg agcgtgggtc tcgcggtatc attgcagcac 2941 tggggccaga tggtaagccc tcccgtatcg tagttatcta cacgacgggg agtcaggcaa 3001 ctatggatga acgaaataga cagatcgctg agataggtgc ctcactgatt aagcattggt 3061 aactgtcaga ccaagtttac tcatatatac tttagattga tttacgcgcc ctgtagcggc 3121 gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc 3181 ctagcgcccg ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc 3241 cgtcaagctc taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc 3301 gaccccaaaa aacttgattt gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg 3361 gtttttcgcc ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact 3421 tgaacaacac tcaaccctat ctcgggctat tcttttgatt tataagggat tttgccgatt 3481 tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa 3541 atattaacgt ttacaattta aaaggatcta ggtgaagatc ctttttgata atctcatgac 3601 caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa 3661 aggatcttct tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc 3721 accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt 3781 aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg 3841 ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc 3901 agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt 3961 accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga 4021 gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct 4081 tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg 4141 cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca 4201 cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa 4261 cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt 4321 ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga 4381 taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga 4441 gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatacgtac 4501 gatttaaata ggcctgactc actataggga gaccggaatt ccctggcacg acaggtttcc 4561 cgactggaaa gcgggcagtg agcgcaacgc aattaatgtg agttagctca ctcattaggg 4621 accccgggct ttacacttta tgcttccggc tcgtatgttg tgtggaattg tgagcggata 4681 acaatttcac acaggaaaca gctatgacca tgattacgga ttcactggcc gtcgttttac 4741 aacgtcgtga ctggtaaaac ccgggcgtta cccaacttaa tcgccttgca gcacatcccc 4801 ctttcgccag caggcgtaat aaggaaagga tccatgtact atttgaaaaa cacaaacttt 4861 tggatgttcg gtttattctt tttcttttac ttttttatca tgggagccta cttcccgttt 4921 ttcccgattt ggctacatga tatcaaccat atcagcaaaa gtgatacggg tattattttt 4981 gccgctattt ctctgttctc gctattattc caaccgctgt ttggtctgct ttctgacaaa 5041 ctcggtctac gcaaatacct gctgtggatt attaccggca tgttagtgat gtttgcgccg 5101 ttctttattt ttatcttcgg gccactgctg cagtacaaca ttttagtagg atcgattgtt 5161 ggtggtattt atctaggctt tagttttaac gccggtgcgc cagcagtaga ggcatttatt 5221 gagaaagtca gccggcgcag taatttcgaa tttggtcgcg cgcggatgtt tggcagtgtt 5281 ggctgggcgc tggttgcctc gattgtcggg atcatgttca ccattaataa tcagtttgtt 5341 ttctggctgg gctctggcag ttgtctcatc ctcgccgttt tactcttttt cgccaaaacg 5401 gacgcgccct cgagtgccac ggttgccaat gcggtaggtg ccaaccattc ggcatttagc 5461 cttaagctgg cactggaact gttcagacag ccaaaactgt ggtttttgtc actgtatgtt 5521 attggcgttt cctccaccta cgatgttttt gaccaacagt ttgctaattt ctttacttcg 5581 ttctttgcta ccggtgaaca gggtacccgc gtatttggct acgtaacgac aatgggcgaa 5641 ttacttaacg cctcgattat gttctttgcg ccactgatca ttaatcgcat cggtgggaag 5701 aatgccctgc tgctggctgg cactattatg tctgtacgta ttattggctc atcgttcgcc 5761 acctcagcgc tggaagtggt tattctgaaa acgctgcata tgtttgaagt accgttcctg 5821 ctggtgggct cctttaaata tattactagt cagtttgaag tgcgtttttc agcgacgatt 5881 tatctggtca gtttcagctt ctttaagcaa ctggcgatga tttttatgtc tgtactggcg 5941 ggcaatatgt atgaaagcat aggtttccaa ggcgcttatc tggtgctggg tctggtggcg 6001 ctgggcttca ccttaatttc cgtgttcacg cttagcggcc cgggcccgct ttccctgctg 6061 cgtcgtcagg tgaatgaagt cgcttaaagg cc //
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