质粒名称: | p2CT-His-MBP-Lbu_C2c2_R1079A_K1080A |
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出品公司: | 爱迪基因 |
目录编号: | 91861 |
存储实验室: | Jennifer Doudna |
载体骨架基本信息 |
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载体名称: | p2CT |
载体出品公司: | UC Berkeley Macrolab |
载体抗性: | 氨苄青霉素 |
空载体大小: | -- |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 细菌表达 |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | LbuCas13a (LbuC2c2) R0179A/K1080A |
物种来源: | -- |
插入大小: | -- |
基因突变: | K1080A |
GenBank编号 | -- |
启动子 | -- |
标签/融合蛋白: | His6-MBP-TEV site(主干上的N终端) |
克隆方法: | Ligation Independent克隆 |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | -- |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | p2CT-His-MBP-Lbu_C2c2_R1079A_K1080A was a gift from Jennifer Doudna (Addgene plasmid # 91861 ; http://n2t.net/addgene:91861 ; RRID:Addgene_91861) |
参考文献部分: | RNA Targeting by Functionally Orthogonal Type VI-A CRISPR-Cas Enzymes. East-Seletsky A, O'Connell MR, Burstein D, Knott GJ, Doudna JA. Mol Cell. 2017 May 4;66(3):373-383.e3. doi: 10.1016/j.molcel.2017.04.008. 10.1016/j.molcel.2017.04.008 PubMed 28475872 |
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载体序列
LOCUS p2CT-His-MBP-Lbu_C2c2_R1079A_K1080A 9434 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION Bacterial expression for Cas13a. ACCESSION . VERSION . KEYWORDS p2CT-His-MBP-Lbu_C2c2_R1079A_K1080A SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 9434) AUTHORS East-Seletsky A, O'Connell MR, Burstein D, Knott GJ, Doudna JA TITLE RNA Targeting by Functionally Orthogonal Type VI-A CRISPR-Cas Enzymes. JOURNAL Mol Cell. 2017 May 4;66(3):373-383.e3. doi: 10.1016/j.molcel.2017.04.008. PUBMED 28475872 REFERENCE 2 (bases 1 to 9434) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..9434 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind 118..137 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 371..388 /label=L4440 /note="L4440 vector, forward primer" misc_feature 403..542 /label=bom /note="basis of mobility region from pBR322" primer_bind complement(468..487) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" primer_bind 628..650 /label=pGEX 3' /note="pGEX vectors, reverse primer" CDS complement(644..835) /codon_start=1 /gene="rop" /product="Rop protein, which maintains plasmids at low copy number" /label=rop /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA DELYRSCLARFGDDGENL" primer_bind 2293..2312 /label=pBRrevBam /note="pBR322 vectors, tet region, downstream of BamHI, reverse primer" primer_bind 2396..2415 /label=T7 /note="T7 promoter, forward primer" promoter 2396..2414 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" RBS 2503..2525 /note="efficient ribosome binding site from bacteriophage T7 gene 10 (Olins and Rangwala, 1989)" CDS 2545..2562 /codon_start=1 /product="6xHis affinity tag" /label=6xHis /translation="HHHHHH" CDS 2572..3672 /codon_start=1 /gene="malE (mutated)" /product="maltose binding protein from E. coli" /label=MBP /note="This version of the gene does not encode a signal sequence, so MBP will remain in the cytosol." /translation="MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLE EKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKL IAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIA ADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGE TAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFL ENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAF WYAVRTAVINAASGRQTVDEALKDAQT" primer_bind 3646..3669 /label=MBP-F /note="Maltose binding protein, forward primer" CDS 3727..3747 /codon_start=1 /product="tobacco etch virus (TEV) protease recognition and cleavage site" /label=TEV site /translation="ENLYFQS" primer_bind complement(7359..7377) /label=T7 Term /note="T7 terminator, reverse primer" terminator 7373..7420 /label=T7 terminator /note="transcription terminator for bacteriophage T7 RNA polymerase" promoter complement(7786..7814) /label=tet promoter /note="E. coli promoter for tetracycline efflux protein gene" primer_bind complement(7841..7859) /label=pBRforEco /note="pBR322 vectors, upsteam of EcoRI site, forward primer" promoter 7927..8031 /gene="bla" /label=AmpR promoter CDS 8032..8892 /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind complement(8250..8269) /label=Amp-R /note="Ampicillin resistance gene, reverse primer" rep_origin 9063..217 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" ORIGIN 1 gagataccta cagcgtgagc tatgagaaag cgccacgctt cccgaaggga gaaaggcgga 61 caggtatccg gtaagcggca gggtcggaac aggagagcgc acgagggagc ttccaggggg 121 aaacgcctgg tatctttata gtcctgtcgg gtttcgccac ctctgacttg agcgtcgatt 181 tttgtgatgc tcgtcagggg ggcggagcct atggaaaaac gccagcaacg cggccttttt 241 acggttcctg gccttttgct ggccttttgc tcacatgttc tttcctgcgt tatcccctga 301 ttctgtggat aaccgtatta ccgcctttga gtgagctgat accgctcgcc gcagccgaac 361 gaccgagcgc agcgagtcag tgagcgagga agcggaagag cgcctgatgc ggtattttct 421 ccttacgcat ctgtgcggta tttcacaccg caatggtgca ctctcagtac aatctgctct 481 gatgccgcat agttaagcca gtatacactc cgctatcgct acgtgactgg gtcatggctg 541 cgccccgaca cccgccaaca cccgctgacg cgccctgacg ggcttgtctg ctcccggcat 601 ccgcttacag acaagctgtg accgtctccg ggagctgcat gtgtcagagg ttttcaccgt 661 catcaccgaa acgcgcgagg cagctgcggt aaagctcatc agcgtggtcg tgaagcgatt 721 cacagatgtc tgcctgttca tccgcgtcca gctcgttgag tttctccaga agcgttaatg 781 tctggcttct gataaagcgg gccatgttaa gggcggtttt ttcctgtttg gtcactgatg 841 cctccgtgta agggggattt ctgttcatgg gggtaatgat accgatgaaa cgagagagga 901 tgctcacgat acgggttact gatgatgaac atgcccggtt actggaacgt tgtgagggta 961 aacaactggc ggtatggatg cggcgggacc agagaaaaat cactcagggt caatgccagc 1021 gcttcgttaa tacagatgta ggtgttccac agggtagcca gcagcatcct gcgatgcaga 1081 tccggaacat aatggtgcag ggcgctgact tccgcgtttc cagactttac gaaacacgga 1141 aaccgaagac cattcatgtt gttgctcagg tcgcagacgt tttgcagcag cagtcgcttc 1201 acgttcgctc gcgtatcggt gattcattct gctaaccagt aaggcaaccc cgccagccta 1261 gccgggtcct caacgacagg agcacgatca tgcgcacccg tggccaggac ccaacgctgc 1321 ccgagatgcg ccgcgtgcgg ctgctggaga tggcggacgc gatggatatg ttctgccaag 1381 ggttggtttg cgcattcaca gttctccgca agaattgatt ggctccaatt cttggagtgg 1441 tgaatccgtt agcgaggtgc cgccggcttc cattcaggtc gaggtggccc ggctccatgc 1501 accgcgacgc aacgcgggga ggcagacaag gtatagggcg gcgcctacaa tccatgccaa 1561 cccgttccat gtgctcgccg aggcggcata aatcgccgtg acgatcagcg gtccaatgat 1621 cgaagttagg ctggtaagag ccgcgagcga tccttgaagc tgtccctgat ggtcgtcatc 1681 tacctgcctg gacagcatgg cctgcaacgc gggcatcccg atgccgccgg aagcgagaag 1741 aatcataatg gggaaggcca tccagcctcg cgtcgcgaac gccagcaaga cgtagcccag 1801 cgcgtcggcc gccatgccgg cgataatggc ctgcttctcg ccgaaacgtt tggtggcggg 1861 accagtgacg aaggcttgag cgagggcgtg caagattccg aataccgcaa gcgacaggcc 1921 gatcatcgtc gcgctccagc gaaagcggtc ctcgccgaaa atgacccaga gcgctgccgg 1981 cacctgtcct acgagttgca tgataaagaa gacagtcata agtgcggcga cgatagtcat 2041 gccccgcgcc caccggaagg agctgactgg gttgaaggct ctcaagggca tcggtcgacg 2101 ctctccctta tgcgactcct gcattaggaa gcagcccagt agtaggttga ggccgttgag 2161 caccgccgcc gcaaggaatg gtgcatgcaa ggagatggcg cccaacagtc ccccggccac 2221 ggggcctgcc accataccca cgccgaaaca agcgctcatg agcccgaagt ggcgagcccg 2281 atcttcccca tcggtgatgt cggcgatata ggcgccagca accgcacctg tggcgccggt 2341 gatgccggcc acgatgcgtc cggcgtagag gatcgagatc tcgatcccgc gaaattaata 2401 cgactcacta tagggagacc acaacggttt ccctctagtg ccggctccgg agagctcttt 2461 aattaagcgg ccgccctgca ggactcgagt tctagaaata attttgttta actttaagaa 2521 ggagatatac atatgaaatc ttctcaccat caccatcacc atggttcttc tatgaaaatc 2581 gaagaaggta aactggtaat ctggattaac ggcgataaag gctataacgg tctcgctgaa 2641 gtcggtaaga aattcgagaa agataccgga attaaagtca ccgttgagca tccggataaa 2701 ctggaagaga aattcccaca ggttgcggca actggcgatg gccctgacat tatcttctgg 2761 gcacacgacc gctttggtgg ctacgctcaa tctggcctgt tggctgaaat caccccggac 2821 aaagcgttcc aggacaagct gtatccgttt acctgggatg ccgtacgtta caacggcaag 2881 ctgattgctt acccgatcgc tgttgaagcg ttatcgctga tttataacaa agatctgctg 2941 ccgaacccgc caaaaacctg ggaagagatc ccggcgctgg ataaagaact gaaagcgaaa 3001 ggtaagagcg cgctgatgtt caacctgcaa gaaccgtact tcacctggcc gctgattgct 3061 gctgacgggg gttatgcgtt caagtatgaa aacggcaagt acgacattaa agacgtgggc 3121 gtggataacg ctggcgcgaa agcgggtctg accttcctgg ttgacctgat taaaaacaaa 3181 cacatgaatg cagacaccga ttactccatc gcagaagctg cctttaataa aggcgaaaca 3241 gcgatgacca tcaacggccc gtgggcatgg tccaacatcg acaccagcaa agtgaattat 3301 ggtgtaacgg tactgccgac cttcaagggt caaccatcca aaccgttcgt tggcgtgctg 3361 agcgcaggta ttaacgccgc cagtccgaac aaagagctgg caaaagagtt cctcgaaaac 3421 tatctgctga ctgatgaagg tctggaagcg gttaataaag acaaaccgct gggtgccgta 3481 gcgctgaagt cttacgagga agagttggcg aaagatccac gtattgccgc cactatggaa 3541 aacgcccaga aaggtgaaat catgccgaac atcccgcaga tgtccgcttt ctggtatgcc 3601 gtgcgtactg cggtgatcaa cgccgccagc ggtcgtcaga ctgtcgatga agccctgaaa 3661 gacgcgcaga ctaattcgag ctcgaacaac aacaacaata acaataacaa caacctcggg 3721 atcgaggaaa acctgtactt ccaatccaat gcaatgaaag tgacgaaggt aggaggcatt 3781 tcgcataaga agtacacgtc cgaaggccgc ttagtgaagt cagaatcgga agaaaatcgc 3841 acagacgaac gtctgtcggc gttgcttaat atgcgccttg acatgtatat caagaatccc 3901 agcagcacgg aaaccaagga aaatcaaaaa cgcattggga aattaaagaa attcttctca 3961 aacaaaatgg tctatcttaa agacaatacc ttgagtttga agaatgggaa aaaggagaac 4021 attgatcgtg agtattctga gactgacatc cttgagagcg atgtccgtga caagaaaaac 4081 ttcgccgtgt tgaaaaagat ctatctgaat gaaaacgtga actcggagga attggaagtt 4141 tttcgtaacg acattaagaa gaaactgaac aaaatcaaca gcctgaagta ctcatttgaa 4201 aagaataagg cgaattatca aaagattaat gagaataaca tcgagaaggt tgaaggtaag 4261 tcaaagcgta acattattta cgattattat cgtgagtcag cgaaacgtga cgcttatgta 4321 agcaatgtga aagaagcctt tgataagctt tacaaggaag aggacattgc aaaacttgtt 4381 cttgaaattg agaaccttac gaagttagag aaatacaaga ttcgcgagtt ctaccacgaa 4441 attattggac gtaagaatga caaggaaaac tttgcaaaaa tcatctacga agaaatccag 4501 aatgttaata acatgaaaga gttgatcgag aaggtaccgg acatgagtga gttgaaaaag 4561 agccaagtat tttacaagta ttacttagac aaagaagagt tgaacgacaa gaacatcaaa 4621 tacgcgtttt gtcatttcgt ggaaatcgaa atgagtcagt tgctgaagaa ctacgtatat 4681 aagcgcttaa gtaatatctc gaatgacaaa attaagcgta tctttgaata ccagaacttg 4741 aaaaaattga tcgaaaataa gctgttaaac aaacttgaca cgtacgtccg taattgtgga 4801 aagtataatt attatttgca agacggcgaa attgccactt cagatttcat cgcccgcaac 4861 cgtcagaatg aagcgtttct tcgcaacatc attggggtgt catctgtggc ctacttttct 4921 cttcgcaaca ttcttgaaac ggagaacgag aatgatatta ctgggcgtat gcgcggcaaa 4981 acagttaaga acaataaagg tgaagagaag tacgtgtccg gagaagttga taagatctat 5041 aatgaaaata agaagaacga ggttaaggag aacttaaaaa tgttctattc gtacgatttc 5101 aatatggaca acaagaatga aatcgaagat ttcttcgcca acatcgacga ggcgatttct 5161 tccatccgtc acggtattgt ccacttcaac ttggaattag aaggtaagga tatctttgcg 5221 ttcaagaaca ttgcgccatc cgaaatctca aagaagatgt ttcagaatga gattaacgag 5281 aaaaaactga aattgaagat ctttcgtcaa ctgaactctg ccaacgtgtt ccgctatctc 5341 gaaaagtata aaattctgaa ttaccttaaa cgtacacgct tcgagtttgt caataaaaat 5401 atcccattcg tcccgtcttt caccaaatta tattcgcgca ttgatgacct gaagaatagt 5461 cttgggattt actggaaaac tccgaaaaca aacgacgaca ataagactaa ggagattatt 5521 gatgcccaaa tctatttgct taaaaacatc tattacgggg agttcctgaa ttatttcatg 5581 tcgaacaatg gtaatttctt tgagatttct aaagaaatca tcgaattgaa caagaacgat 5641 aaacgcaact taaagactgg gttttacaag ctgcaaaagt ttgaagacat ccaggagaag 5701 attccaaagg aatacttggc gaatatccag tccctgtaca tgattaatgc cggtaatcag 5761 gacgaagaag aaaaggacac ttatattgat ttcattcaaa agatcttctt aaagggattt 5821 atgacgtatc ttgctaataa cggtcgttta agtctgattt acatcggctc ggatgaagaa 5881 acaaatacgt cattagcaga aaagaagcaa gagtttgaca agttcttgaa gaagtacgag 5941 cagaacaata atatcaagat cccctatgag atcaatgaat tcctgcgtga gatcaaactg 6001 ggaaacatcc tgaagtatac tgagcgttta aacatgttct accttatctt aaagcttttg 6061 aatcacaagg agctgacaaa tctgaagggt agtcttgaaa aatatcagtc tgccaataag 6121 gaagaagcgt tctctgacca attggagtta attaacctgc ttaaccttga caacaaccgc 6181 gtgacggaag acttcgaatt agaggccgac gagattggaa aatttcttga tttcaatggc 6241 aacaaagtta aggataacaa ggaactgaaa aagttcgata caaacaagat ctactttgac 6301 ggcgagaaca ttatcaaaca ccgtgccttc tacaatatta agaaatatgg catgttaaac 6361 ttactggaga aaattgccga caaggctgga tacaagatct cgatcgaaga gctgaagaaa 6421 tactccaata aaaagaatga gatcgagaag aaccataaga tgcaggaaaa tctgcaccgc 6481 aaatacgctc gtccccgtaa agacgagaag tttacagatg aggactatga aagttacaag 6541 caagctattg agaatattga ggagtacacc caccttaaga acaaggtaga attcaatgag 6601 ctgaatttac tgcagggcct gttgctgcgc attttacatc gtttagtcgg atatacctca 6661 atttgggaac gcgatctgcg cttccgcctt aaaggtgagt tcccagaaaa ccaatacatc 6721 gaagagatct tcaactttga aaataagaag aacgtgaagt acaaaggggg tcagattgta 6781 gagaaataca ttaaattcta caaggaatta catcaaaatg atgaagttaa gatcaacaag 6841 tacagttccg cgaatatcaa ggtgttgaag caagaaaaga aggaccttta tattcgcaat 6901 tacatcgccc acttcaatta tattcctcac gccgagatct cactgctgga agtccttgaa 6961 aatttgcgta aattgctgtc ctacgatgcc gcactgaaaa atgccgtaat gaaatcagta 7021 gttgatatcc ttaaggagta tggttttgta gccacattca aaatcggggc ggacaagaag 7081 atcggtattc agacactgga gagcgaaaaa atcgtgcatc ttaagaatct taagaagaag 7141 aagttaatga ctgaccgcaa ttccgaggaa ctttgcaaat tggtgaagat tatgtttgaa 7201 tacaaaatgg aagagaaaaa gtctgaaaac taataacatt ggaagtggat aacggatccg 7261 cgatcgcggc gcgccacctg gtggccggcc ggtaccacgc gtgcgcgctg atccggctgc 7321 taacaaagcc cgaaaggaag ctgagttggc tgctgccacc gctgagcaat aactagcata 7381 accccttggg gcctctaaac gggtcttgag gggttttttg ctgaaaggag gaactatatc 7441 cggatatcca caggacgggt gtggtcgcca tgatcgcgta gtcgatagtg gctccaagta 7501 gcgaagcgag caggactggg cggcggccaa agcggtcgga cagtgctccg agaacgggtg 7561 cgcatagaaa ttgcatcaac gcatatagcg ctagcagcac gccatagtga ctggcgatgc 7621 tgtcggaatg gacgatatcc cgcaagaggc ccggcagtac cggcataacc aagcctatgc 7681 ctacagcatc cagggtgacg gtgccgagga tgacgatgag cgcattgtta gatttcatac 7741 acggtgcctg actgcgttag caatttaact gtgataaact accgcattaa agcttatcga 7801 tgataagctg tcaaacatga gaattcttga agacgaaagg gcctcgtgat acgcctattt 7861 ttataggtta atgtcatgat aataatggtt tcttagacgt caggtggcac ttttcgggga 7921 aatgtgcgcg gaacccctat ttgtttattt ttctaaatac attcaaatat gtatccgctc 7981 atgagacaat aaccctgata aatgcttcaa taacattgaa aaaggaagag tatgagtatt 8041 caacatttcc gtgtcgccct tattcccttt tttgcggcat tttgccttcc tgtttttgct 8101 cacccagaaa cgctggtgaa agtaaaagat gctgaagatc agttgggtgc acgagtgggt 8161 tacatcgaac tggatctcaa cagcggtaag atccttgaga gttttcgccc cgaagaacgt 8221 tttccaatga tgagcacttt taaagttctg ctatgtggcg cggtattatc ccgtgttgac 8281 gccgggcaag agcaactcgg tcgccgcata cactattctc agaatgactt ggttgagtac 8341 tcaccagtca cagaaaagca tcttacggat ggcatgacag taagagaatt atgcagtgct 8401 gccataacca tgagtgataa cactgcggcc aacttacttc tgacaacgat cggaggaccg 8461 aaggagctaa ccgctttttt gcacaacatg ggggatcatg taactcgcct tgatcgttgg 8521 gaaccggagc tgaatgaagc cataccaaac gacgagcgtg acaccacgat gcctgcagca 8581 atggcaacaa cgttgcgcaa actattaact ggcgaactac ttactctagc ttcccggcaa 8641 caattaatag actggatgga ggcggataaa gttgcaggac cacttctgcg ctcggccctt 8701 ccggctggct ggtttattgc tgataaatct ggagccggtg agcgtgggtc tcgcggtatc 8761 attgcagcac tggggccaga tggtaagccc tcccgtatcg tagttatcta cacgacgggg 8821 agtcaggcaa ctatggatga acgaaataga cagatcgctg agataggtgc ctcactgatt 8881 aagcattggt aactgtcaga ccaagtttac tcatatatac tttagattga tttaaaactt 8941 catttttaat ttaaaaggat ctaggtgaag atcctttttg ataatctcat gaccaaaatc 9001 ccttaacgtg agttttcgtt ccactgagcg tcagaccccg tagaaaagat caaaggatct 9061 tcttgagatc ctttttttct gcgcgtaatc tgctgcttgc aaacaaaaaa accaccgcta 9121 ccagcggtgg tttgtttgcc ggatcaagag ctaccaactc tttttccgaa ggtaactggc 9181 ttcagcagag cgcagatacc aaatactgtc cttctagtgt agccgtagtt aggccaccac 9241 ttcaagaact ctgtagcacc gcctacatac ctcgctctgc taatcctgtt accagtggct 9301 gctgccagtg gcgataagtc gtgtcttacc gggttggact caagacgata gttaccggat 9361 aaggcgcagc ggtcgggctg aacggggggt tcgtgcacac agcccagctt ggagcgaacg 9421 acctacaccg aact //
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