质粒名称: | pAnc80L65AAP |
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出品公司: | 爱迪基因 |
目录编号: | 92307 |
存储实验室: | Luk Vandenberghe |
载体骨架基本信息 |
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载体名称: | synthetic |
载体出品公司: | -- |
载体抗性: | 卡那霉素 |
空载体大小: | 5238 bp |
完整质粒大小: | 7446 bp |
载体修饰: | -- |
载体类型: | 哺乳动物表达,AAV,合成生物学 |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | Ancestral AAV Capsid Anc80L65AAP,ANC80L65AAP |
物种来源: | Synthetic |
插入大小: | 2208 bp |
基因突变: | -- |
GenBank编号 | -- |
启动子 | Rep2 |
标签/融合蛋白: | -- |
克隆方法: | -- |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | M13rev |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | pAnc80L65AAP was a gift from Luk Vandenberghe (Addgene plasmid # 92307 ; http://n2t.net/addgene:92307 ; RRID:Addgene_92307) |
参考文献部分: | A synthetic AAV vector enables safe and efficient gene transfer to the mammalian inner ear. Landegger LD, Pan B, Askew C, Wassmer SJ, Gluck SD, Galvin A, Taylor R, Forge A, Stankovic KM, Holt JR, Vandenberghe LH. Nat Biotechnol. 2017 Mar;35(3):280-284. doi: 10.1038/nbt.3781. Epub 2017 Feb 6. 10.1038/nbt.3781 PubMed 28165475 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
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载体序列
LOCUS pAnc80L65AAP 7446 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION Adeno-associated Viral Vector (AAV) capsid Anc80L65 in AAV2Rep expression construct with endogenous AAP. ACCESSION . VERSION . KEYWORDS pAnc80L65AAP SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7446) AUTHORS Landegger LD, Pan B, Askew C, Wassmer SJ, Gluck SD, Galvin A, Taylor R, Forge A, Stankovic KM, Holt JR, Vandenberghe LH TITLE A synthetic AAV vector enables safe and efficient gene transfer to the mammalian inner ear. JOURNAL Nat Biotechnol. 2017 Mar;35(3):280-284. doi: 10.1038/nbt.3781. Epub 2017 Feb 6. PUBMED 28165475 REFERENCE 2 (bases 1 to 7446) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..7446 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind complement(2891..2907) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(2891..2907) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(3052..3069) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(3223..3811) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(3303..3322) /label=pBR322ori-F /note="pBR322 origin, forward primer" terminator 4042..4069 /label=T7Te terminator /note="phage T7 early transcription terminator" CDS complement(4088..4903) /codon_start=1 /product="aminoglycoside phosphotransferase" /label=KanR /note="confers resistance to kanamycin in bacteria or G418 (Geneticin(R)) in eukaryotes" /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF" primer_bind 4811..4830 /label=Kan-R /note="Kanamycin resistance gene, reverse primer" primer_bind 4895..4914 /label=pENTR-R /note="pENTR vectors, reverse primer" terminator 5120..5147 /label=T7Te terminator /note="phage T7 early transcription terminator" rep_origin complement(5183..5638) /direction=LEFT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(5320..5341) /label=F1ori-F /note="F1 origin, forward primer" primer_bind 5532..5551 /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 5765..5787 /label=M13/pUC Forward /note="In lacZ gene" primer_bind 5779..5796 /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind 5780..5796 /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind 5830..5846 /label=pBluescriptKS /note="For pBluescript vector" primer_bind 5831..5847 /label=KS primer /note="common sequencing primer, one of multiple similar variants" ORIGIN 1 gttgcgcagc catcgacgtc agacgcggaa gcttcgatca actacgcaga caggtaccaa 61 aacaaatgtt ctcgtcacgt gggcatgaat ctgatgctgt ttccctgcag acaatgcgag 121 agaatgaatc agaattcaaa tatctgcttc actcacggac agaaagactg tttagagtgc 181 tttcccgtgt cagaatctca acccgtttct gtcgtcaaaa aggcgtatca gaaactgtgc 241 tacattcatc atatcatggg aaaggtgcca gacgcttgca ctgcctgcga tctggtcaat 301 gtggatttgg atgactgcat ctttgaacaa taaatgattt aaatcaggta tggctgccga 361 tggttatctt ccagattggc tcgaggacaa cctctctgag ggcattcgcg agtggtggga 421 cttgaaacct ggagccccga aacccaaagc caaccagcaa aagcaggacg acggccgggg 481 tctggtgctt cctggctaca agtacctcgg acccttcaac ggactcgaca agggggagcc 541 cgtcaacgcg gcggacgcag cggccctcga gcacgacaag gcctacgacc agcagctcaa 601 agcgggtgac aatccgtacc tgcggtataa ccacgccgac gccgagtttc aggagcgtct 661 gcaagaagat acgtcttttg ggggcaacct cgggcgagca gtcttccagg ccaagaagcg 721 ggttctcgaa cctctcggtc tggttgagga aggcgctaag acggctcctg gaaagaagag 781 accggtagag caatcacccc aggaaccaga ctcctcttcg ggcatcggca agaaaggcca 841 gcagcccgcg agaaagagac tcaactttgg gcagactggc gactcagagt cagtgcccga 901 ccctcaacca ctcggagaac cccccgcagc cccctctggt gtgggatcta atacaatggc 961 tgcaggcggt ggcgctccaa tggcagacaa taacgaaggc gccgacggag tgggtaacgc 1021 ctcaggaaat tggcattgcg attccacatg gctgggcgac agagtcatca ccaccagcac 1081 ccgaacctgg gccctcccca cctacaacaa ccacctctac aagcaaatct ccagccaatc 1141 gggaggcagc accaacgaca acacctactt cggctacagc accccctggg ggtattttga 1201 ctttaacaga ttccactgcc acttctcacc acgtgactgg cagcgactca tcaacaacaa 1261 ctggggattc cggcccaaga agctcaactt caagctcttc aacatccagg tcaaggaggt 1321 cacgacgaat gatggcacca cgaccatcgc caataacctt accagcacgg ttcaggtctt 1381 tacggactcg gaataccagc tcccgtacgt cctcggctct gcgcaccagg gctgcctgcc 1441 tccgttcccg gcggacgtct tcatgattcc tcagtacggg tacctgactc tgaacaatgg 1501 cagtcaggcc gtgggccgtt cctccttcta ctgcctggaa tactttcctt ctcaaatgct 1561 gagaacgggc aacaactttc agttcagcta cacgtttgag gacgtgcctt ttcacagcag 1621 ctacgcgcac agccaaagcc tggaccggct gatgaacccc ctcatcgacc agtacctgta 1681 ctacctgtct cggactcaga ccacgagtgg taccgcagga aatcggacgt tgcaattttc 1741 tcaggccggg cctagtagca tggcgaatca ggccaaaaac tggctacccg ggccctgcta 1801 ccggcagcaa cgcgtctcca agacaaccaa tcaaaataac aacagcaact ttgcctggac 1861 cggtgccacc aagtatcatc tgaatggcag agactctctg gtaaatcccg gtcccgctat 1921 ggcaacccac aaggacgacg aagacaaatt ttttccgatg agcggagtct taatatttgg 1981 gaaacaggga gctggaaata gcaacgtgga ccttgacaac gttatgataa ccaacgagga 2041 agaaattaaa accaccaacc cagtggccac agaagagtac ggcacggtgg ccactaacct 2101 gcaatcggcc aacaccgctc ctgctacagg gaccgtcaac agtcaaggag ccttacctgg 2161 catggtctgg caggaccggg acgtgtacct gcagggtcct atctgggcca agattcctca 2221 cacggacgga cactttcatc cctcgccgct gatgggaggc tttggactga aacacccgcc 2281 tcctcagatc ctgattaaga atacacctgt tcccgcgaat cctccaacta ccttcagtcc 2341 agctaagttt gcgtcgttca tcacgcagta cagcaccgga caggtcagcg tggaaattga 2401 atgggagctg cagaaagaaa acagcaaacg ctggaaccca gagattcaat acacttccaa 2461 ctacaacaaa tctacaaatg tggactttgc tgttgacaca aatggcgttt attctgagcc 2521 tcgccccatc ggcacccgtt acctcacccg taatctgtaa actagtttgc ttgttaatca 2581 ataaaccgtt taattcgttt cagttgaact ttggtctctg cgtatttctt tcttatctag 2641 tttccatgct ctagaggtcc tgtattagag gtcacgtgag tgttttgcga cattttgcga 2701 caccatgtgg tcacgctggg tatttaagcc cgagtgagca cgcagggtct ccattttgaa 2761 gcgggaggtt tgaacgcgca gccgccaagc cgaattctgc agatatccat cacactggcg 2821 gccgctcgac tagagcggcc gccaccgcgg tggagctcca gcttttgttc gcgcgcttgg 2881 cgtaatcatg gtcatagctg tttcctgtgt gaaattccac agcctggggt gcctaattgc 2941 gttgcgctca ctgcccgctt tccagtcggg aaacctgtcg tgccagctgc attaatgaat 3001 cggccaacgc gcggggagag gcggtttgcg tattgggcgc tcttccgctt cctcgctcac 3061 tgactcgctg cgctcggtcg ttcggctgcg gcgagcggta tcagctcact caaaggcggt 3121 aatacggtta tccacagaat caggggataa cgcaggaaag aacatgtgag caaaaggcca 3181 gcaaaaggcc aggaaccgta aaaaggccgc gttgctggcg tttttccata ggctccgccc 3241 ccctgacgag catcacaaaa atcgacgctc aagtcagagg tggcgaaacc cgacaggact 3301 ataaagatac caggcgtttc cccctggaag ctccctcgtg cgctctcctg ttccgaccct 3361 gccgcttacc ggatacctgt ccgcctttct cccttcggga agcgtggcgc tttctcatag 3421 ctcacgctgt aggtatctca gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca 3481 cgaacccccc gttcagcccg accgctgcgc cttatccggt aactatcgtc ttgagtccaa 3541 cccggtaaga cacgacttat cgccactggc agcagccact ggtaacagga ttagcagagc 3601 gaggtatgta ggcggtgcta cagagttctt gaagtggtgg cctaactacg gctacactag 3661 aagaacagta tttggtatct gcgctctgct gaagccagtt accttcggaa aaagagttgg 3721 tagctcttga tccggcaaac aaaccaccgc tggtagcggt ggtttttttg tttgcaagca 3781 gcagattacg cgcagaaaaa aaggatctca agaagatcct ttgatctttt ctacggggtc 3841 tgacgctcag tggaacgaaa actcacgtta agggattttg gtcatgagat tatcaaaaag 3901 gatcttcacc tagatccttt taaattaaaa atgaagtttt aaatcaatct aaagtatata 3961 tgagtaaact tggtctgaca gaaataataa aaaagccgga ttaataatct ggctttttat 4021 attctctctc tagtatataa acgcagaaag gcccacccga aggtgagcca gtgtgactct 4081 agtattatta gaaaaactca tcgagcatca aatgaaactg caatttattc atatcaggat 4141 tatcaatacc atatttttga aaaagccgtt tctgtaatga aggagaaaac tcaccgaggc 4201 agttccaaag aatggcaagg tcctggtaac ggtctgcgat tccgacccgt ccaacatcaa 4261 tacaacctat taatttcccc tcgtcaaaaa taaggttatc aagtgagaaa tcaccatgag 4321 tgacgactga atccggtgag aatggcaaga gcttgtgcat ttctttccag acttgttcaa 4381 caggccagcc attacgctcg tcatcaaaat cactcgcatc aaccaaaccg ttattcatgc 4441 gtgattgcgc ctgagcaaga cgaaatacac gatcgctgtt aaaaggacaa ttacaaacag 4501 gaatcgaatg taaccggcgc aggaacacgg ccagcgcatc aacaatattt tcacctgaat 4561 caggatattc ttctaatacc tggaaggctg ttttcccagg aatcgcggtg gtgagtaacc 4621 acgcatcatc aggagtacgg ataaaatgct tgatggtcgg gagaggcata aactccgtca 4681 gccagttgag acggaccatc tcatctgtaa catcattggc aacgctacct ttgccatgtt 4741 tcagaaacaa ctctggcgca tcgggcttcc catacaagcg atagattgtc gcacctgatt 4801 gcccgacatt atcgcgagcc catttatacc catataaatc agcgtccatg ttggagttta 4861 agcgcggacg ggagcaagac gtttcccgtt gaatatggct cataacaccc cttgtattac 4921 tgtttatgta agcagacagt tttattgttc atgatgatat atttttatct tgtgcaatgt 4981 aacatcagag attttgagac acaacgtggc tttgttgaat aaatcgaact tttgctgagt 5041 tgaaggatca gctctagtaa aataataaaa aagccggatt aataatctgg ctttttatat 5101 tctctctcta gtatataaac gcagaaaggc ccacccgaag gtgagccagt gtgacggcac 5161 atttccccga aaagtgccac ctaaattgta agcgttaata ttttgttaaa attcgcgtta 5221 aatttttgtt aaatcagctc attttttaac caataggccg aaatcggcaa aatcccttat 5281 aaatcaaaag aatagaccga gatagggttg agtgttgttc cagtttggaa caagagtcca 5341 ctattaaaga acgtggactc caacgtcaaa gggcgaaaaa ccgtctatca gggcgatggc 5401 ccactacgtg aaccatcacc ctaatcaagt tttttggggt cgaggtgccg taaagcacta 5461 aatcggaacc ctaaagggag cccccgattt agagcttgac ggggaaagcc ggcgaacgtg 5521 gcgagaaagg aagggaagaa agcgaaagga gcgggcgcta gggcgctggc aagtgtagcg 5581 gtcacgctgc gcgtaaccac cacacccgcc gcgcttaatg cgccgctaca gggcgcgtcc 5641 cattcgccat tcaggctgcg caactgttgg gaagggcgat cggtgcgggc ctcttcgcta 5701 ttacgccagc tggcgaaagg gggatgtgct gcaaggcgat taagttgggt aacgccaggg 5761 ttttcccagt cacgacgttg taaaacgacg gccagtgagc gcgcggcgaa ttgggtaccg 5821 ggccccccct cgaggtcgac ggtatcgtat ttaagcccga gtgagcacgc agggtctcca 5881 ttttgaagcg ggaggtttga acgcgcagcc gccatgccgg ggttttacga gattgtgatt 5941 aaggtcccca gcgaccttga cgagcatctg cccggcattt ctgacagctt tgtgaactgg 6001 gtggccgaga aggaatggga gttgccgcca gattctgaca tggatctgaa tctgattgag 6061 caggcacccc tgaccgtggc cgagaagctg cagcgcgact ttctgacgga atggcgccgt 6121 gtgagtaagg ccccggaggc tcttttcttt gtgcaatttg agaagggaga gagctacttc 6181 cacatgcacg tgctcgtgga aaccaccggg gtgaaatcca tggttttggg acgtttcctg 6241 agtcagattc gcgaaaaact gattcagaga atttaccgcg ggatcgagcc gactttgcca 6301 aactggttcg cggtcacaaa gaccagaaat ggcgccggag gcgggaacaa ggtggtggat 6361 gagtgctaca tccccaatta cttgctcccc aaaacccagc ctgagctcca gtgggcgtgg 6421 actaatatgg aacagtattt aagcgcctgt ttgaatctca cggagcgtaa acggttggtg 6481 gcgcagcatc tgacgcacgt gtcgcagacg caggagcaga acaaagagaa tcagaatccc 6541 aattctgatg cgccggtgat cagatcaaaa acttcagcca ggtacatgga gctggtcggg 6601 tggctcgtgg acaaggggat tacctcggag aagcagtgga tccaggagga ccaggcctca 6661 tacatctcct tcaatgcggc ctccaactcg cggtcccaaa tcaaggctgc cttggacaat 6721 gcgggaaaga ttatgagcct gactaaaacc gcccccgact acctggtggg ccagcagccc 6781 gtggaggaca tttccagcaa tcggatttat aaaattttgg aactaaacgg gtacgatccc 6841 caatatgcgg cttccgtctt tctgggatgg gccacgaaaa agttcggcaa gaggaacacc 6901 atctggctgt ttgggcctgc aactaccggg aagaccaaca tcgcggaggc catagcccac 6961 actgtgccct tctacgggtg cgtaaactgg accaatgaga actttccctt caacgactgt 7021 gtcgacaaga tggtgatctg gtgggaggag gggaagatga ccgccaaggt cgtggagtcg 7081 gccaaagcca ttctcggagg aagcaaggtg cgcgtggacc agaaatgcaa gtcctcggcc 7141 cagatagacc cgactcccgt gatcgtcacc tccaacacca acatgtgcgc cgtgattgac 7201 gggaactcaa cgaccttcga acaccagcag ccgttgcaag accggatgtt caaatttgaa 7261 ctcacccgcc gtctggatca tgactttggg aaggtcacca agcaggaagt caaagacttt 7321 ttccggtggg caaaggatca cgtggttgag gtggagcatg aattctacgt caaaaagggt 7381 ggagccaaga aaagacccgc ccccagtgac gcagatataa gtgagcccaa acgggtgcgc 7441 gagtca //
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