质粒名称: | pBT120a17 |
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出品公司: | Addgene |
目录编号: | 138510 |
存储实验室: | David Liu |
载体骨架基本信息 |
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载体名称: | pCMV with a BR322 origin |
载体出品公司: | -- |
空载体大小: | -- |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | Synthetic Biology |
筛选标记: | -- |
载体抗性: | 氨苄霉素100 μg/mL |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | -- |
插入基因信息 |
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插入基因名称: | gIII-xLuxAB |
物种来源: | Other |
插入大小: | -- |
基因突变: | -- |
GenBank编号 | -- |
启动子: | -- |
标签/融合蛋白: | -- |
克隆方法: | -- |
5’克隆位点: | -- |
3’克隆位点: | -- |
5’测序引物 | -- |
3’测序引物 | -- |
文献引用方法 |
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材料和方法部分: | pBT120a17 was a gift from David Liu (Addgene plasmid # 138510 ; http://n2t.net/addgene:138510 ; RRID:Addgene_138510) |
参考文献部分: | Phage-assisted evolution of an adenine base editor with improved Cas domain compatibility and activity. Richter MF, Zhao KT, Eton E, Lapinaite A, Newby GA, Thuronyi BW, Wilson C, Koblan LW, Zeng J, Bauer DE, Doudna JA and Liu DR. Nat Biotechnol (2020) 10.1038/s41587-020-0453-z |
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载体基本信息
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载体序列
LOCUS pBT120a17 6808 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION P1. ACCESSION . VERSION . KEYWORDS pBT120a17 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6808) AUTHORS Richter MF, Zhao KT, Eton E, Lapinaite A, Newby GA, Thuronyi BW, Wilson C, Koblan LW, Zeng J, Bauer DE, Doudna JA, Liu DR TITLE Phage-assisted evolution of an adenine base editor with improved Cas domain compatibility and activity JOURNAL Nat Biotechnol (2020) REFERENCE 2 (bases 1 to 6808) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..6808 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind 70..89 /label=T7 /note="T7 promoter, forward primer" promoter 70..88 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" CDS 1399..2478 /codon_start=1 /gene="luxA" /product="LuxA luciferase subunit" /label=LuxA /note="from the Photorhabdus luminescens bioluminescence operon" /translation="MKFGNFLLTYQPPQFSQTEVMKRLVKLGRISEECGFDTVWLLEHH FTEFGLLGNPYVAAAYLLGATKKLNVGTAAIVLPTAHPVRQLEDVNLLDQMSKGRFRFG ICRGLYNKDFRVFGTDMNNSRALAECWYGLIKNGMTEGYMEADNEHIKFHKVKVNPAAY SRGGAPVYVVAESASTTEWAAQFGLPMILSWIINTNEKKAQLELYNEVAQEYGHDIHNI DHCLSYITSVDHDSIKAKEICRKFLGHWYDSYVNATTIFDDSDQTRGYDFNKGQWRDFV LKGHKDTNRRIDYSYEINPVGTPQECIDIIQKDIDATGISNICCGFEANGTVDEIIASM KLFQSDVMPFLKEKQRSLLY" CDS 2542..3522 /codon_start=1 /gene="luxB" /product="LuxB luciferase subunit" /label=LuxB /note="from the Photorhabdus luminescens bioluminescence operon" /translation="KFGLFFLNFINSTTVQEQSIVRMQEITEYVDKLNFEQILVYENHF SDNGVVGAPLTVSGFLLGLTEKIKIGSLNHIITTHHPVRIAEEACLLDQLSEGRFILGF SDCEKKDEMHFFNRPVEYQQQLFEECYEIINDALTTGYCNPDNDFYSFPKISVNPHAYT PGGPRKYVTATSHHIVEWAAKKGIPLIFKWDDSNDVRYEYAERYKAVADKYDVDLSEID HQLMILVNYNEDSNKAKQETRAFISDYVLEMHPNENFENKLEEIIAENAVGNYTECITA AKLAIEKCGAKSVLLSFEPMNDLMSQKNVINIVDDNIKKYHTEYT" misc_RNA complement(3642..3717) /label=gRNA scaffold /note="guide RNA scaffold for the Streptococcus pyogenes CRISPR/Cas9 system" promoter complement(3744..3774) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 3789..3810 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." CDS complement(4022..4882) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQDQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 4645..4664 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(4883..4987) /gene="bla" /label=AmpR promoter primer_bind 5055..5073 /label=pBRforEco /note="pBR322 vectors, upsteam of EcoRI site, forward primer" CDS complement(5094..6044) /codon_start=1 /gene="rep101" /product="RepA protein needed for replication with the pSC101 origin" /label=Rep101 /translation="MSELVVFKANELAISRYDLTEHETKLILCCVALLNPTIENPTRKE RTVSFTYNQYAQMMNISRENAYGVLAKATRELMTRTVEIRNPLVKGFKIFQWTNYAKFS SEKLELVFSEEILPYLFQLKKFIKYNLEHVKSFENKYSMRIYEWLLKELTQKKTHKANI EISLDEFKFMLMLENNYHEFKRLNQWVLKPISKDLNTYSNMKLVVDKRGRPTDTLIFQV ELDRQMDLVTELENNQIKMNGDKIPTTITSDSYLRNGLRKTLHDALTAKIQLTSFEAKF LSDMQSKHDLNGSFSWLTQKQRTTLENILAKYGRI" rep_origin 6092..6314 /label=pSC101 ori /note="low-copy replication origin that requires the Rep101 protein" ORIGIN 1 caaataaaac gaaaggctca gtcgaaagac tgggcctttc gttttgctga ggagacttag 61 ggaccctact aatacgactc actataggga gaaagacctg caggtgcagt aaaggaaaaa 121 aaaaatgaaa aaattattat tcgcaattcc tttagttgtt cctttctatt ctcactccgc 181 tgaaactgtt gaaagttgtt tagcaaaacc ccatacagaa aattcattta ctaacgtctg 241 gaaagacgac aaaactttag atcgttacgc taactatgag ggctgtctgt ggaatgctac 301 aggcgttgta gtttgtactg gtgacgaaac tcagtgttac ggtacatggg ttcctattgg 361 gcttgctatc cctgaaaatg agggtggtgg ctctgagggt ggtggttctg agggtggcgg 421 ttctgagggt ggcggtacta aacctcctga gtacggtgat acacctattc cgggctatac 481 ttatatcaac cctctcgacg gcacttatcc gcctggtact gagcaaaacc ccgctaatcc 541 taatccttct cttgaggagt ctcagcctct taatactttc atgtttcaga ataataggtt 601 ccgaaatagg cagggggcat taactgttta tacgggcact gttactcaag gcactgaccc 661 cgttaaaact tattaccagt acactcctgt atcatcaaaa gccatgtatg acgcttactg 721 gaacggtaaa ttcagagact gcgctttcca ttctggcttt aatgaggatc cattcgtttg 781 tgaatatcaa ggccaatcgt ctgacctgcc tcaacctcct gtcaatgctg gcggcggctc 841 tggtggtggt tctggtggcg gctctgaggg tggtggctct gagggtggcg gttctgaggg 901 tggcggctct gagggaggcg gttccggtgg tggctctggt tccggtgatt ttgattatga 961 aaagatggca aacgctaata agggggctat gaccgaaaat gccgatgaaa acgcgctaca 1021 gtctgacgct aaaggcaaac ttgattctgt cgctactgat tacggtgctg ctatcgatgg 1081 tttcattggt gacgtttccg gccttgctaa tggtaatggt gctactggtg attttgctgg 1141 ctctaattcc caaatggctc aagtcggtga cggtgataat tcacctttaa tgaataattt 1201 ccgtcaatat ttacctagtc ttccgcagag tgtagagtgc cgaccattcg ttttcggtgc 1261 gggcaagccg tacgagttca gcatcgactg cgataagatc aatttgtttc gaggagtttt 1321 cgcattccta ctctacgtgg caacgttcat gtacgtgttc tcaacattcg ccaatatttt 1381 aagaaacaaa gagtcttaat gaaatttgga aactttttgc ttacatacca acctccccaa 1441 ttttcccaaa cagaggtaat gaaacgtttg gttaaattag gtcgcatctc tgaggagtgt 1501 ggttttgata ccgtatggtt actggagcat catttcacgg agtttggttt gcttggtaac 1561 ccttatgtcg ctgctgcata tttacttggc gcgactaaaa aattgaatgt aggaactgcc 1621 gctattgttc ttcccacagc ccatccagta cgccaacttg aagatgtgaa tttattggat 1681 caaatgtcaa aaggacgatt tcggtttggt atttgccgag ggctttacaa caaggacttt 1741 cgcgtattcg gcacagatat gaataacagt cgcgccttag cggaatgctg gtacgggctg 1801 ataaagaatg gcatgacaga gggatatatg gaagctgata atgaacatat caagttccat 1861 aaggtaaaag taaaccccgc ggcgtatagc agaggtggcg caccggttta tgtggtggct 1921 gaatcagctt cgacgactga gtgggctgct caatttggcc taccgatgat attaagttgg 1981 attataaata ctaacgaaaa gaaagcacaa cttgagcttt ataatgaagt ggctcaagaa 2041 tatgggcacg atattcataa tatcgaccat tgcttatcat atataacatc tgtagatcat 2101 gactcaatta aagcgaaaga gatttgccgg aaatttctgg ggcattggta tgattcttat 2161 gtgaatgcta cgactatttt tgatgattca gaccaaacaa gaggttatga tttcaataaa 2221 gggcagtggc gtgactttgt attaaaagga cataaagata ctaatcgccg tattgattac 2281 agttacgaaa tcaatcccgt gggaacgccg caggaatgta ttgacataat tcaaaaagac 2341 attgatgcta caggaatatc aaatatttgt tgtggatttg aagctaatgg aacagtagac 2401 gaaattattg cttccatgaa gctgttccag tctgatgtca tgccatttct taaagaaaaa 2461 caacgttcgc tattatatta tggcggtggc ggtagcggcg gtggcggtag cggcggtggc 2521 ggtagcggcg gtggcggtag caaatttgga ttgttcttcc ttaacttcat caattcaaca 2581 actgttcaag aacagagtat agttcgcatg caggaaataa cggagtatgt tgataagttg 2641 aattttgaac agattttagt gtatgaaaat catttttcag ataatggtgt tgtcggcgct 2701 cctctgactg tttctggttt tctgctcggt ttaacagaga aaattaaaat tggttcatta 2761 aatcacatca ttacaactca tcatcctgtc cgcatagcgg aggaagcttg cttattggat 2821 cagttaagtg aagggagatt tattttaggg tttagtgatt gcgaaaaaaa agatgaaatg 2881 cattttttta atcgcccggt tgaatatcaa cagcaactat ttgaagagtg ttatgaaatc 2941 attaacgatg ctttaacaac aggctattgt aatccagata acgattttta tagcttccct 3001 aaaatatctg taaatcccca tgcttatacg ccaggcggac ctcggaaata tgtaacagca 3061 accagtcatc atattgttga gtgggcggcc aaaaaaggta ttcctctcat ctttaagtgg 3121 gatgattcta atgatgttag atatgaatat gctgaaagat ataaagccgt tgcggataaa 3181 tatgacgttg acctatcaga gatagaccat cagttaatga tattagttaa ctataacgaa 3241 gatagtaata aagctaaaca agagacgcgt gcatttatta gtgattatgt tcttgaaatg 3301 caccctaatg aaaatttcga aaataaactt gaagaaataa ttgcagaaaa cgctgtcgga 3361 aattatacgg agtgtataac tgcggctaag ttggcaattg aaaagtgtgg tgcgaaaagt 3421 gtattgctgt cctttgaacc aatgaatgat ttgatgagcc aaaaaaatgt aatcaatatt 3481 gttgatgata atattaagaa gtaccacacg gaatatacct aaacggagcc aatgtacgca 3541 aaaaccccgc ttcagcgggg ttttttcgcc aaaaaaaacc ccgccctgtc aggggcgggg 3601 ttttttttta tgttgaaaat ctccttctag attaaaaaaa agcaccgact cggtgccact 3661 ttttcaagtt gataacggac tagccttatt ttaacttgct atttctagct ctaaaaccaa 3721 gatgtttgag tgataactcc acacaacata cgagccggaa gcataaagtg taaagcctgg 3781 ggtgcctaat gagtgagcta actcacatta attgcgttgc gctcactgcc cgctttccag 3841 tcgggaaacc tgtcgtgcca gctgcattaa tgaatcggcc aacgcgcggg gagaggcggt 3901 ttgcgtattg ggcgcactta attaacggca ctgcgaaaaa accccgccga agcggggttt 3961 tttgcgaaat ataatgaccc tcttgataac ccaagagggc attttttaat gcccatggcg 4021 tttaccaatg cttaatcagt gaggcaccta tctcagcgat ctgtctattt cgttcatcca 4081 tagttgcctg actccccgtc gtgtagataa ctacgatacg ggagggctta ccatctggcc 4141 ccagtgctgc aatgataccg cgtgacccac gctcaccggc tccagattta tcagcaataa 4201 accagccagc cggaagggcc gagcgcagaa gtggtcctgc aactttatcc gcctccatcc 4261 agtctattaa ttgttgccgg gaagctagag taagtagttc gccagttaat agtttgcgca 4321 acgttgttgc cattgctaca ggcatcgtgg tgtcacgctc gtcgtttggt atggcttcat 4381 tcagctccgg ttcccaacga tcaaggcgag ttacatgatc ccccatgttg tgcaaaaaag 4441 cggttagctc cttcggtcct ccgatcgttg tcagaagtaa gttggccgca gtgttatcac 4501 tcatggttat ggcagcactg cataattctc ttactgtcat gccatccgta agatgctttt 4561 ctgtgactgg tgagtactca accaagtcat tctgagaata gtgtatgcgg cgaccgagtt 4621 gatcttgccc ggcgtcaata cgggataata ccgcgccaca tagcagaact ttaaaagtgc 4681 tcatcattgg aaaacgttct tcggggcgaa aactctcaag gatcttaccg ctgttgagat 4741 ccagttcgat gtaacccact cgtgcaccca actgatcttc agcatctttt actttcacca 4801 gcgtttctgg gtgagcaaaa acaggaaggc aaaatgccgc aaaaaaggga ataagggcga 4861 cacggaaatg ttgaatactc atactcttcc tttttcaata ttattgaagc atttatcagg 4921 gttattgtct catgagcgga tacatatttg aatgtattta gaaaaataaa caaatagggg 4981 ttccgcgcac atttccccga aaagtgccac ctgacgtcta agaaaccatt attatcatga 5041 cattaaccta taaaaatagg cgtatcacga ggcccttagg ccaaataggc cgttcagatc 5101 cttccgtatt tagccagtat gttctctagt gtggttcgtt gtttttgcgt gagccatgag 5161 aacgaaccat tgagatcatg cttactttgc atgtcactca aaaattttgc ctcaaaactg 5221 gtgagctgaa tttttgcagt taaagcatcg tgtagtgttt ttcttagtcc gttacgtagg 5281 taggaatctg atgtaatggt tgttggtatt ttgtcaccat tcatttttat ctggttgttc 5341 tcaagttcgg ttacgagatc catttgtcta tctagttcaa cttggaaaat caacgtatca 5401 gtcgggcggc ctcgcttatc aaccaccaat ttcatattgc tgtaagtgtt taaatcttta 5461 cttattggtt tcaaaaccca ttggttaagc cttttaaact catggtagtt attttcaagc 5521 attaacatga acttaaattc atcaaggcta atctctatat ttgccttgtg agttttcttt 5581 tgtgttagtt cttttaataa ccactcataa atcctcatag agtatttgtt ttcaaaagac 5641 ttaacatgtt ccagattata ttttatgaat ttttttaact ggaaaagata aggcaatatc 5701 tcttcactaa aaactaattc taatttttcg cttgagaact tggcatagtt tgtccactgg 5761 aaaatcttaa agcctttaac caaaggattc ctgatttcca cagttctcgt catcagctct 5821 ctggttgctt tagctaatac accataagca ttttccctac tgatgttcat catctgagcg 5881 tattggttat aagtgaacga taccgtccgt tctttccttg tagggttttc aatcgtgggg 5941 ttgagtagtg ccacacagca taaaattagc ttggtttcat gctccgttaa gtcatagcga 6001 ctaatcgcta gttcatttgc tttgaaaaca actaattcag acatacatct caattggtct 6061 aggtgatttt aatcactata ccaattgaga tgggctagtc aatgataatt actagtcctt 6121 ttcctttgag ttgtgggtat ctgtaaattc tgctagacct ttgctggaaa acttgtaaat 6181 tctgctagac cctctgtaaa ttccgctaga cctttgtgtg ttttttttgt ttatattcaa 6241 gtggttataa tttatagaat aaagaaagaa taaaaaaaga taaaaagaat agatcccagc 6301 cctgtgtata actcactact ttagtcagtt ccgcagtatt acaaaaggat gtcgcaaacg 6361 ctgtttgctc ctctacaaaa cagaccttaa aaccctaaag gcttaagtag caccctcgca 6421 agctcgggca aatcgctgaa tattcctttt gtctccgacc atcaggcacc tgagtcgctg 6481 tctttttcgt gacattcagt tcgctgcgct cacggctctg gcagtgaatg ggggtaaatg 6541 gcactacagg cgccttttat ggattcatgc aaggaaacta cccataatac aagaaaagcc 6601 cgtcacgggc ttctcagggc gttttatggc gggtctgcta tgtggtgcta tctgactttt 6661 tgctgttcag cagttcctgc cctctgattt tccagtctga ccacttcgga ttatcccgtg 6721 acaggtcatt cagactggct aatgcaccca gtaaggcagc ggtatcatca acaggcttac 6781 ccgtcttact gtcaagagga catccggt //
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