质粒名称: | pET-28a_6H-TAQ_E602D |
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出品公司: | Addgene |
目录编号: | 166944 |
存储实验室: | Robert Tjian |
载体骨架基本信息 |
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载体名称: | pET-28a(+) |
载体出品公司: | Novagen (EMD Millipore) |
空载体大小: | 5369 bp |
完整质粒大小: | 7826 bp |
载体修饰: | -- |
载体类型: | 细菌表达 |
筛选标记: | -- |
载体抗性: | 卡那霉素50 μg/mL |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | -- |
插入基因信息 |
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插入基因名称: | Thermus aquaticus DNA polymerase,TAQ polymerase |
物种来源: | Thermus aquaticus |
插入大小: | 2499 bp |
基因突变: | E602D |
GenBank编号 | J04639 |
启动子: | T7 |
标签/融合蛋白: | 6X His(主干上的N端子) |
克隆方法: | 限制性内切酶 |
5’克隆位点: | NdeI(未破坏) |
3’克隆位点: | EcoRI(未破坏) |
5’测序引物 | taatacgactcactataggg |
3’测序引物 | TAGTTATTGCTCAGCGGTGG |
文献引用方法 |
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材料和方法部分: | pET-28a_6H-TAQ_E602D was a gift from Robert Tjian (Addgene plasmid # 166944 ; http://n2t.net/addgene:166944 ; RRID:Addgene_166944) |
参考文献部分: | Open-source RNA extraction and RT-qPCR methods for SARS-CoV-2 detection. Graham TGW, Dugast-Darzacq C, Dailey GM, Nguyenla XH, Van Dis E, Esbin MN, Abidi A, Stanley SA, Darzacq X, Tjian R. PLoS One. 2021 Feb 3;16(2):e0246647. doi: 10.1371/journal.pone.0246647. eCollection 2021. 10.1371/journal.pone.0246647 PubMed 33534838 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pET-28a_6H-TAQ_E602D 7822 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Bacterial expression of Taq DNA polymerase. ACCESSION . VERSION . KEYWORDS pET-28a_6H-TAQ_E602D SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7822) AUTHORS Graham TGW, Dugast-Darzacq C, Dailey GM, Nguyenla XH, Van Dis E, Esbin MN, Abidi A, Stanley SA, Darzacq X, Tjian R TITLE Open-source RNA extraction and RT-qPCR methods for SARS-CoV-2 detection. JOURNAL PLoS One. 2021 Feb 3;16(2):e0246647. doi: 10.1371/journal.pone.0246647. eCollection 2021. PUBMED 33534838 REFERENCE 2 (bases 1 to 7822) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..7822 /organism="synthetic DNA construct" /mol_type="other DNA" protein_bind 1..25 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." RBS 40..62 /note="efficient ribosome binding site from bacteriophage T7 gene 10 (Olins and Rangwala, 1989)" CDS 81..98 /codon_start=1 /product="6xHis affinity tag" /label=6xHis /translation="HHHHHH" CDS 108..125 /codon_start=1 /product="thrombin recognition and cleavage site" /label=thrombin site /translation="LVPRGS" CDS 129..2627 /codon_start=1 /product="thermostable DNA polymerase from Thermus aquaticus" /label=Taq polymerase /translation="MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVY GFAKSLLKALKEDGDAVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVD LLGLARLEVPGYEADDVLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLI TPAWLWEKYGLRPDQWADYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLD RLKPAIREKILAHMDDLKLSWDLAKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSL LHEFGLLESPKALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYK ALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWT EEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRA LSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAA VLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSS SDPNLQNIPVRTPLGQRIRRAFIAEDGWLLVALDYSQIELRVLAHLSGDENLIRVFQEG RDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIE RYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPV QGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYP LAVPLEVEVGIGEDWLSAKE" CDS 2668..2685 /codon_start=1 /product="6xHis affinity tag" /label=6xHis /translation="HHHHHH" primer_bind complement(2738..2756) /label=T7 Term /note="T7 terminator, reverse primer" terminator 2752..2799 /label=T7 terminator /note="transcription terminator for bacteriophage T7 RNA polymerase" rep_origin 2836..3291 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(2923..2942) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 3133..3154 /label=F1ori-F /note="F1 origin, forward primer" CDS complement(3383..4198) /codon_start=1 /gene="aph(3')-Ia" /product="aminoglycoside phosphotransferase" /label=KanR /note="confers resistance to kanamycin in bacteria or G418 (Geneticin(R)) in eukaryotes" /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF" primer_bind 4106..4125 /label=Kan-R /note="Kanamycin resistance gene, reverse primer" primer_bind 4190..4209 /label=pENTR-R /note="pENTR vectors, reverse primer" rep_origin 4320..4908 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 4809..4828 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 5062..5079 /label=L4440 /note="L4440 vector, forward primer" misc_feature 5094..5233 /label=bom /note="basis of mobility region from pBR322" primer_bind complement(5159..5178) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" primer_bind 5319..5341 /label=pGEX 3' /note="pGEX vectors, reverse primer" CDS complement(5335..5526) /codon_start=1 /gene="rop" /product="Rop protein, which maintains plasmids at low copy number" /label=rop /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA DELYRSCLARFGDDGENL" CDS complement(6335..7417) /codon_start=1 /gene="lacI" /product="lac repressor" /label=lacI /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR ALADSLMQLARQVSRLESGQ" primer_bind 7379..7398 /label=LacI-R /note="LacI, reverse primer" promoter complement(7418..7495) /gene="lacI" /label=lacI promoter primer_bind 7701..7720 /label=pBRrevBam /note="pBR322 vectors, tet region, downstream of BamHI, reverse primer" primer_bind 7804..1 /label=T7 /note="T7 promoter, forward primer" promoter 7804..7822 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" ORIGIN 1 ggaattgtga gcggataaca attcccctct agaaataatt ttgtttaact ttaagaagga 61 gatataccat gggcagcagc catcatcatc atcatcacag cagcggcctg gtgccgcgcg 121 gcagccatat gagggggatg ctgcccctct ttgagcccaa gggccgggtc ctcctggtgg 181 acggccacca cctggcctac cgcaccttcc acgccctgaa gggcctcacc accagccggg 241 gggagccggt gcaggcggtc tacggcttcg ccaagagcct cctcaaggcc ctcaaggagg 301 acggggacgc ggtgatcgtg gtctttgacg ccaaggcccc ctccttccgc cacgaggcct 361 acggggggta caaggcgggc cgggccccca cgccggagga ctttccccgg caactcgccc 421 tcatcaagga gctggtggac ctcctggggc tggcgcgcct cgaggtcccg ggctacgagg 481 cggacgacgt cctggccagc ctggccaaga aggcggaaaa ggagggctac gaggtccgca 541 tcctcaccgc cgacaaagac ctttaccagc tcctttccga ccgcattcac gtcctccacc 601 ccgaggggta cctcatcacc ccggcctggc tttgggaaaa gtacggcctg aggcccgacc 661 agtgggccga ctaccgggcc ctgaccgggg acgagtccga caaccttccc ggggtcaagg 721 gcatcgggga gaagacggcg aggaagcttc tggaggagtg ggggagcctg gaagccctcc 781 tcaagaacct ggaccggctg aagcccgcca tccgggagaa gatcctggcc cacatggacg 841 atctgaagct ctcctgggac ctggccaagg tgcgcaccga cctgcccctg gaggtggact 901 tcgccaaaag gcgggagccc gaccgggaga ggcttagggc ctttctggag aggcttgagt 961 ttggcagcct cctccacgag ttcggccttc tggaaagccc caaggccctg gaggaggccc 1021 cctggccccc gccggaaggg gccttcgtgg gctttgtgct ttcccgcaag gagcccatgt 1081 gggccgatct tctggccctg gccgccgcca gggggggccg ggtccaccgg gcccccgagc 1141 cttataaagc cctcagggac ctgaaggagg cgcgggggct tctcgccaaa gacctgagcg 1201 ttctggccct gagggaaggc cttggcctcc cgcccggcga cgaccccatg ctcctcgcct 1261 acctcctgga cccttccaac accacccccg agggggtggc ccggcgctac ggcggggagt 1321 ggacggagga ggcgggggag cgggccgccc tttccgagag gctcttcgcc aacctgtggg 1381 ggaggcttga gggggaggag aggctccttt ggctttaccg ggaggtggag aggccccttt 1441 ccgctgtcct ggcccacatg gaggccacgg gggtgcgcct ggacgtggcc tatctcaggg 1501 ccttgtccct ggaggtggcc gaggagatcg cccgcctcga ggccgaggtc ttccgcctgg 1561 ccggccaccc cttcaacctc aactcccggg accagctgga aagggtcctc tttgacgagc 1621 tagggcttcc cgccatcggc aagacggaga agaccggcaa gcgctccacc agcgccgccg 1681 tcctggaggc cctccgcgag gcccacccca tcgtggagaa gatcctgcag taccgggagc 1741 tcaccaagct gaagagcacc tacattgacc ccttgccgga cctcatccac cccaggacgg 1801 gccgcctcca cacccgcttc aaccagacgg ccacggccac gggcaggcta agtagctccg 1861 atcccaacct ccagaacatc cccgtccgca ccccgcttgg gcagaggatc cgccgggcct 1921 tcatcgccga ggatgggtgg ctattggtgg ccctggacta tagccagata gagctcaggg 1981 tgctggccca cctctccggc gacgagaacc tgatccgggt cttccaggag gggcgggaca 2041 tccacacgga gaccgccagc tggatgttcg gcgtcccccg ggaggccgtg gaccccctga 2101 tgcgccgggc ggccaagacc atcaacttcg gggtcctcta cggcatgtcg gcccaccgcc 2161 tctcccagga gctagccatc ccttacgagg aggcccaggc cttcattgag cgctactttc 2221 agagcttccc caaggtgcgg gcctggattg agaagaccct ggaggagggc aggaggcggg 2281 ggtacgtgga gaccctcttc ggccgccgcc gctacgtgcc agacctagag gcccgggtga 2341 agagcgtgcg ggaggcggcc gagcgcatgg ccttcaacat gcccgtccag ggcaccgccg 2401 ccgacctcat gaagctggct atggtgaagc tcttccccag gctggaggaa atgggggcca 2461 ggatgctcct tcaggtccac gacgagctgg tcctcgaggc cccaaaagag agggcggagg 2521 ccgtggcccg gctggccaag gaggtcatgg agggggtgta tcccctggcc gtgcccctgg 2581 aggtggaggt ggggataggg gaggactggc tctccgccaa ggagtgagaa ttcgagctcc 2641 gtcgacaagc ttgcggccgc actcgagcac caccaccacc accactgaga tccggctgct 2701 aacaaagccc gaaaggaagc tgagttggct gctgccaccg ctgagcaata actagcataa 2761 ccccttgggg cctctaaacg ggtcttgagg ggttttttgc tgaaaggagg aactatatcc 2821 ggattggcga atgggacgcg ccctgtagcg gcgcattaag cgcggcgggt gtggtggtta 2881 cgcgcagcgt gaccgctaca cttgccagcg ccctagcgcc cgctcctttc gctttcttcc 2941 cttcctttct cgccacgttc gccggctttc cccgtcaagc tctaaatcgg gggctccctt 3001 tagggttccg atttagtgct ttacggcacc tcgaccccaa aaaacttgat tagggtgatg 3061 gttcacgtag tgggccatcg ccctgataga cggtttttcg ccctttgacg ttggagtcca 3121 cgttctttaa tagtggactc ttgttccaaa ctggaacaac actcaaccct atctcggtct 3181 attcttttga tttataaggg attttgccga tttcggccta ttggttaaaa aatgagctga 3241 tttaacaaaa atttaacgcg aattttaaca aaatattaac gcttacaatt taggtggcac 3301 ttttcgggga aatgtgcgcg gaacccctat ttgtttattt ttctaaatac attcaaatat 3361 gtatccgctc atgaattaat tcttagaaaa actcatcgag catcaaatga aactgcaatt 3421 tattcatatc aggattatca ataccatatt tttgaaaaag ccgtttctgt aatgaaggag 3481 aaaactcacc gaggcagttc cataggatgg caagatcctg gtatcggtct gcgattccga 3541 ctcgtccaac atcaatacaa cctattaatt tcccctcgtc aaaaataagg ttatcaagtg 3601 agaaatcacc atgagtgacg actgaatccg gtgagaatgg caaaagttta tgcatttctt 3661 tccagacttg ttcaacaggc cagccattac gctcgtcatc aaaatcactc gcatcaacca 3721 aaccgttatt cattcgtgat tgcgcctgag cgagacgaaa tacgcgatcg ctgttaaaag 3781 gacaattaca aacaggaatc gaatgcaacc ggcgcaggaa cactgccagc gcatcaacaa 3841 tattttcacc tgaatcagga tattcttcta atacctggaa tgctgttttc ccggggatcg 3901 cagtggtgag taaccatgca tcatcaggag tacggataaa atgcttgatg gtcggaagag 3961 gcataaattc cgtcagccag tttagtctga ccatctcatc tgtaacatca ttggcaacgc 4021 tacctttgcc atgtttcaga aacaactctg gcgcatcggg cttcccatac aatcgataga 4081 ttgtcgcacc tgattgcccg acattatcgc gagcccattt atacccatat aaatcagcat 4141 ccatgttgga atttaatcgc ggcctagagc aagacgtttc ccgttgaata tggctcataa 4201 caccccttgt attactgttt atgtaagcag acagttttat tgttcatgac caaaatccct 4261 taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa aggatcttct 4321 tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc accgctacca 4381 gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt aactggcttc 4441 agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg ccaccacttc 4501 aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc agtggctgct 4561 gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt accggataag 4621 gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga gcgaacgacc 4681 tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct tcccgaaggg 4741 agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg cacgagggag 4801 cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca cctctgactt 4861 gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa cgccagcaac 4921 gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt ctttcctgcg 4981 ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga taccgctcgc 5041 cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga gcgcctgatg 5101 cggtattttc tccttacgca tctgtgcggt atttcacacc gcaatggtgc actctcagta 5161 caatctgctc tgatgccgca tagttaagcc agtatacact ccgctatcgc tacgtgactg 5221 ggtcatggct gcgccccgac acccgccaac acccgctgac gcgccctgac gggcttgtct 5281 gctcccggca tccgcttaca gacaagctgt gaccgtctcc gggagctgca tgtgtcagag 5341 gttttcaccg tcatcaccga aacgcgcgag gcagctgcgg taaagctcat cagcgtggtc 5401 gtgaagcgat tcacagatgt ctgcctgttc atccgcgtcc agctcgttga gtttctccag 5461 aagcgttaat gtctggcttc tgataaagcg ggccatgtta agggcggttt tttcctgttt 5521 ggtcactgat gcctccgtgt aagggggatt tctgttcatg ggggtaatga taccgatgaa 5581 acgagagagg atgctcacga tacgggttac tgatgatgaa catgcccggt tactggaacg 5641 ttgtgagggt aaacaactgg cggtatggat gcggcgggac cagagaaaaa tcactcaggg 5701 tcaatgccag cgcttcgtta atacagatgt aggtgttcca cagggtagcc agcagcatcc 5761 tgcgatgcag atccggaaca taatggtgca gggcgctgac ttccgcgttt ccagacttta 5821 cgaaacacgg aaaccgaaga ccattcatgt tgttgctcag gtcgcagacg ttttgcagca 5881 gcagtcgctt cacgttcgct cgcgtatcgg tgattcattc tgctaaccag taaggcaacc 5941 ccgccagcct agccgggtcc tcaacgacag gagcacgatc atgcgcaccc gtggggccgc 6001 catgccggcg ataatggcct gcttctcgcc gaaacgtttg gtggcgggac cagtgacgaa 6061 ggcttgagcg agggcgtgca agattccgaa taccgcaagc gacaggccga tcatcgtcgc 6121 gctccagcga aagcggtcct cgccgaaaat gacccagagc gctgccggca cctgtcctac 6181 gagttgcatg ataaagaaga cagtcataag tgcggcgacg atagtcatgc cccgcgccca 6241 ccggaaggag ctgactgggt tgaaggctct caagggcatc ggtcgagatc ccggtgccta 6301 atgagtgagc taacttacat taattgcgtt gcgctcactg cccgctttcc agtcgggaaa 6361 cctgtcgtgc cagctgcatt aatgaatcgg ccaacgcgcg gggagaggcg gtttgcgtat 6421 tgggcgccag ggtggttttt cttttcacca gtgagacggg caacagctga ttgcccttca 6481 ccgcctggcc ctgagagagt tgcagcaagc ggtccacgct ggtttgcccc agcaggcgaa 6541 aatcctgttt gatggtggtt aacggcggga tataacatga gctgtcttcg gtatcgtcgt 6601 atcccactac cgagatatcc gcaccaacgc gcagcccgga ctcggtaatg gcgcgcattg 6661 cgcccagcgc catctgatcg ttggcaacca gcatcgcagt gggaacgatg ccctcattca 6721 gcatttgcat ggtttgttga aaaccggaca tggcactcca gtcgccttcc cgttccgcta 6781 tcggctgaat ttgattgcga gtgagatatt tatgccagcc agccagacgc agacgcgccg 6841 agacagaact taatgggccc gctaacagcg cgatttgctg gtgacccaat gcgaccagat 6901 gctccacgcc cagtcgcgta ccgtcttcat gggagaaaat aatactgttg atgggtgtct 6961 ggtcagagac atcaagaaat aacgccggaa cattagtgca ggcagcttcc acagcaatgg 7021 catcctggtc atccagcgga tagttaatga tcagcccact gacgcgttgc gcgagaagat 7081 tgtgcaccgc cgctttacag gcttcgacgc cgcttcgttc taccatcgac accaccacgc 7141 tggcacccag ttgatcggcg cgagatttaa tcgccgcgac aatttgcgac ggcgcgtgca 7201 gggccagact ggaggtggca acgccaatca gcaacgactg tttgcccgcc agttgttgtg 7261 ccacgcggtt gggaatgtaa ttcagctccg ccatcgccgc ttccactttt tcccgcgttt 7321 tcgcagaaac gtggctggcc tggttcacca cgcgggaaac ggtctgataa gagacaccgg 7381 catactctgc gacatcgtat aacgttactg gtttcacatt caccaccctg aattgactct 7441 cttccgggcg ctatcatgcc ataccgcgaa aggttttgcg ccattcgatg gtgtccggga 7501 tctcgacgct ctcccttatg cgactcctgc attaggaagc agcccagtag taggttgagg 7561 ccgttgagca ccgccgccgc aaggaatggt gcatgcaagg agatggcgcc caacagtccc 7621 ccggccacgg ggcctgccac catacccacg ccgaaacaag cgctcatgag cccgaagtgg 7681 cgagcccgat cttccccatc ggtgatgtcg gcgatatagg cgccagcaac cgcacctgtg 7741 gcgccggtga tgccggccac gatgcgtccg gcgtagagga tcgagatctc gatcccgcga 7801 aattaatacg actcactata gg //