质粒名称: | pETM6 |
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出品公司: | 爱迪基因 |
目录编号: | 49795 |
存储实验室: | Mattheos Koffas |
载体骨架基本信息 |
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载体名称: | pET-Duet |
载体出品公司: | Novagen |
载体抗性: | 氨苄霉素 |
空载体大小: | 5000 bp |
载体修饰: | AvrII was inserted upstream of the T7 promoter, XbaI was inserted between the operator (lacO) and ribosome binding site (RBS), SpeI was between the multiple-cloning site (MCS) and T7 terminator, and NheI was placed downstream of the T7 terminator |
载体类型: | 细菌表达 |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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启动子 | T7 |
标签/融合蛋白: | S-tag (C terminal on insert) |
克隆方法: | 限制性内切酶 |
测序引物: |
T7: TAATACGACTCACTATAGGG T7t: GCTAGTTATTGCTCAGCGG |
文献引用方法 |
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材料和方法部分: | pETM6 was a gift from Mattheos Koffas (爱迪基因 plasmid # 49795) |
参考文献部分: | ePathBrick: a synthetic biology platform for engineering metabolic pathways in E. coli. Xu P, Vansiri A, Bhan N, Koffas MA. ACS Synth Biol. 2012 Jul 20;1(7):256-66. doi: 10.1021/sb300016b. Epub 2012 May 4. 10.1021/sb300016b PubMed 23651248 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pETM6 5203 bp ds-DNA circular SYN 10-JAN-2018 DEFINITION ePathBrick vector for pathway engineering in E. coli.. ACCESSION . VERSION . KEYWORDS pETM6 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 5203) AUTHORS Xu P, Vansiri A, Bhan N, Koffas MA TITLE ePathBrick: a synthetic biology platform for engineering metabolic pathways in E. coli. JOURNAL ACS Synth Biol. 2012 Jul 20;1(7):256-66. doi: 10.1021/sb300016b. Epub 2012 May 4. PUBMED 23651248 COMMENT This file is created by Vector NTI http://www.biofeng.com/ COMMENT ORIGDB|GenBank COMMENT VNTAUTHORNAME|biofeng.com| COMMENT VNTNAME|pETM6| FEATURES Location/Qualifiers source 1..5203 /organism="synthetic DNA construct" /mol_type="other DNA" protein_bind 3..27 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." RBS 42..64 /note="efficient ribosome binding site from bacteriophage T7 gene 10 (Olins and Rangwala, 1989)" CDS 138..182 /codon_start=1 /product="affinity and epitope tag derived from pancreatic ribonuclease A" /label=S-Tag /translation="KETAAAKFERQHMDS" primer_bind complement(221..239) /label=T7 Term /note="T7 terminator, reverse primer" terminator 235..282 /label=T7 terminator /note="transcription terminator for bacteriophage T7 RNA polymerase" rep_origin 326..781 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(413..432) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 623..644 /label=F1ori-F /note="F1 origin, forward primer" CDS complement(896..1756) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 1519..1538 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(1757..1849) /gene="bla" /label=AmpR promoter rep_origin 1930..2518 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 2419..2438 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 2672..2689 /label=L4440 /note="L4440 vector, forward primer" misc_feature 2704..2846 /label=bom /note="basis of mobility region from pBR322" primer_bind complement(2772..2791) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" primer_bind 2932..2954 /label=pGEX 3' /note="pGEX vectors, reverse primer" CDS complement(2948..3139) /codon_start=1 /gene="rop" /product="Rop protein, which maintains plasmids at low copy number" /label=rop /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA DELYRSCLARFGDDGENL" CDS complement(3711..4793) /codon_start=1 /gene="lacI" /product="lac repressor" /label=lacI /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR ALADSLMQLARQVSRLESGQ" primer_bind 4755..4774 /label=LacI-R /note="LacI, reverse primer" promoter complement(4794..4871) /gene="lacI" /label=lacI promoter primer_bind 5077..5096 /label=pBRrevBam /note="pBR322 vectors, tet region, downstream of BamHI, reverse primer" primer_bind 5187..3 /label=T7 /note="T7 promoter, forward primer" promoter 5187..2 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" ORIGIN 1 ggggaattgt gagcggataa caattcccct ctagaaataa ttttgtttaa ctttaagaag 61 gagatataca tatggcagat ctcaattgga tatcggccgg ccacgcgatc gctgacgtcg 121 gtaccctcga gtctggtaaa gaaaccgctg ctgcgaaatt tgaacgccag cacatggact 181 cgtctactag tcgcagctta attaacctaa actgctgcca ccgctgagca ataactagca 241 taaccccttg gggcctctaa acgggtcttg aggggttttt tgctagcgaa aggaggagtc 301 gactatatcc ggattggcga atgggacgcg ccctgtagcg gcgcattaag cgcggcgggt 361 gtggtggtta cgcgcagcgt gaccgctaca cttgccagcg ccctagcgcc cgctcctttc 421 gctttcttcc cttcctttct cgccacgttc gccggctttc cccgtcaagc tctaaatcgg 481 gggctccctt tagggttccg atttagtgct ttacggcacc tcgaccccaa aaaacttgat 541 tagggtgatg gttcacgtag tgggccatcg ccctgataga cggtttttcg ccctttgacg 601 ttggagtcca cgttctttaa tagtggactc ttgttccaaa ctggaacaac actcaaccct 661 atctcggtct attcttttga tttataaggg attttgccga tttcggccta ttggttaaaa 721 aatgagctga tttaacaaaa atttaacgcg aattttaaca aaatattaac gtttacaatt 781 tctggcggca cgatggcatg agattatcaa aaaggatctt cacctagatc cttttaaatt 841 aaaaatgaag ttttaaatca atctaaagta tatatgagta aacttggtct gacagttacc 901 aatgcttaat cagtgaggca cctatctcag cgatctgtct atttcgttca tccatagttg 961 cctgactccc cgtcgtgtag ataactacga tacgggaggg cttaccatct ggccccagtg 1021 ctgcaatgat accgcgagac ccacgctcac cggctccaga tttatcagca ataaaccagc 1081 cagccggaag ggccgagcgc agaagtggtc ctgcaacttt atccgcctcc atccagtcta 1141 ttaattgttg ccgggaagct agagtaagta gttcgccagt taatagtttg cgcaacgttg 1201 ttgccattgc tacaggcatc gtggtgtcac gctcgtcgtt tggtatggct tcattcagct 1261 ccggttccca acgatcaagg cgagttacat gatcccccat gttgtgcaaa aaagcggtta 1321 gctccttcgg tcctccgatc gttgtcagaa gtaagttggc cgcagtgtta tcactcatgg 1381 ttatggcagc actgcataat tctcttactg tcatgccatc cgtaagatgc ttttctgtga 1441 ctggtgagta ctcaaccaag tcattctgag aatagtgtat gcggcgaccg agttgctctt 1501 gcccggcgtc aatacgggat aataccgcgc cacatagcag aactttaaaa gtgctcatca 1561 ttggaaaacg ttcttcgggg cgaaaactct caaggatctt accgctgttg agatccagtt 1621 cgatgtaacc cactcgtgca cccaactgat cttcagcatc ttttactttc accagcgttt 1681 ctgggtgagc aaaaacagga aggcaaaatg ccgcaaaaaa gggaataagg gcgacacgga 1741 aatgttgaat actcatactc ttcctttttc aatcatgatt gaagcattta tcagggttat 1801 tgtctcatga gcggatacat atttgaatgt atttagaaaa ataaacaaat aggtcatgac 1861 caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa 1921 aggatcttct tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc 1981 accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt 2041 aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg 2101 ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc 2161 agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt 2221 accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga 2281 gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct 2341 tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg 2401 cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca 2461 cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa 2521 cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt 2581 ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga 2641 taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga 2701 gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatatatgg 2761 tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagtatac actccgctat 2821 cgctacgtga ctgggtcatg gctgcgcccc gacacccgcc aacacccgct gacgcgccct 2881 gacgggcttg tctgctcccg gcatccgctt acagacaagc tgtgaccgtc tccgggagct 2941 gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct 3001 catcagcgtg gtcgtgaagc gattcacaga tgtctgcctg ttcatccgcg tccagctcgt 3061 tgagtttctc cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg 3121 ttttttcctg tttggtcact gatgcctccg tgtaaggggg atttctgttc atgggggtaa 3181 tgataccgat gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc 3241 ggttactgga acgttgtgag ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa 3301 aaatcactca gggtcaatgc cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta 3361 gccagcagca tcctgcgatg cagatccgga acataatggt gcagggcgct gacttccgcg 3421 tttccagact ttacgaaaca cggaaaccga agaccattca tgttgttgct caggtcgcag 3481 acgttttgca gcagcagtcg cttcacgttc gctcgcgtat cggtgattca ttctgctaac 3541 cagtaaggca accccgccag cctagccggg tcctcaacga caggagcacg atcatgctag 3601 tcatgccccg cgcccaccgg aaggagctga ctgggttgaa ggctctcaag ggcatcggtc 3661 gagatcccgg tgcctaatga gtgagctaac ttacattaat tgcgttgcgc tcactgcccg 3721 ctttccagtc gggaaacctg tcgtgccagc tgcattaatg aatcggccaa cgcgcgggga 3781 gaggcggttt gcgtattggg cgccagggtg gtttttcttt tcaccagtga gacgggcaac 3841 agctgattgc ccttcaccgc ctggccctga gagagttgca gcaagcggtc cacgctggtt 3901 tgccccagca ggcgaaaatc ctgtttgatg gtggttaacg gcgggatata acatgagctg 3961 tcttcggtat cgtcgtatcc cactaccgag atgtccgcac caacgcgcag cccggactcg 4021 gtaatggcgc gcattgcgcc cagcgccatc tgatcgttgg caaccagcat cgcagtggga 4081 acgatgccct cattcagcat ttgcatggtt tgttgaaaac cggacatggc actccagtcg 4141 ccttcccgtt ccgctatcgg ctgaatttga ttgcgagtga gatatttatg ccagccagcc 4201 agacgcagac gcgccgagac agaacttaat gggcccgcta acagcgcgat ttgctggtga 4261 cccaatgcga ccagatgctc cacgcccagt cgcgtaccgt cttcatggga gaaaataata 4321 ctgttgatgg gtgtctggtc agagacatca agaaataacg ccggaacatt agtgcaggca 4381 gcttccacag caatggcatc ctggtcatcc agcggatagt taatgatcag cccactgacg 4441 cgttgcgcga gaagattgtg caccgccgct ttacaggctt cgacgccgct tcgttctacc 4501 atcgacacca ccacgctggc acccagttga tcggcgcgag atttaatcgc cgcgacaatt 4561 tgcgacggcg cgtgcagggc cagactggag gtggcaacgc caatcagcaa cgactgtttg 4621 cccgccagtt gttgtgccac gcggttggga atgtaattca gctccgccat cgccgcttcc 4681 actttttccc gcgttttcgc agaaacgtgg ctggcctggt tcaccacgcg ggaaacggtc 4741 tgataagaga caccggcata ctctgcgaca tcgtataacg ttactggttt cacattcacc 4801 accctgaatt gactctcttc cgggcgctat catgccatac cgcgaaaggt tttgcgccat 4861 tcgatggtgt ccgggatctc gacgctctcc cttatgcgac tcctgcatta ggaagcagcc 4921 cagtagtagg ttgaggccgt tgagcaccgc cgccgcaagg aatggtgcat gcaaggagat 4981 ggcgcccaac agtcccccgg ccacggggcc tgccaccata cccacgccga aacaagcgct 5041 catgagcccg aagtggcgag cccgatcttc cccatcggtg atgtcggcga tataggcgcc 5101 agcaaccgca cctgtggcgc cggtgatgcc ggccacgatg cgtccggcgt agcctaggat 5161 cgagatcgat ctcgatcccg cgaaattaat acgactcact ata //