质粒名称: | pMyosin-PSmOrange |
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出品公司: | Addgene |
目录编号: | 31921 |
存储实验室: | Vladislav Verkhusha |
载体骨架基本信息 |
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载体名称: | pN1 |
载体出品公司: | -- |
载体抗性: | 卡那霉素 |
空载体大小: | -- |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 哺乳细胞表达 |
筛选标记: | 新霉素(G418) |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | PSmOrange |
物种来源: | -- |
插入大小: | 711 bp |
基因突变: | S21T, Q63L, F100Y, L125M, K166R, P192S in PSmOrange (mutations are relative to mOrange but numbering is relative to EGFP) |
GenBank编号 | -- |
启动子 | -- |
标签/融合蛋白: | Myosin(插入端N端) |
克隆方法: | 限制性内切酶 |
5' 克隆位点: | AgeI(未破坏) |
3' 克隆位点: | NotI (未破坏) |
5' 测序引物 | CMV-F |
3' 测序引物 | SV40pA-R |
文献引用方法 |
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材料和方法部分: | pMyosin-PSmOrange was a gift from Vladislav Verkhusha (Addgene plasmid # 31921 ; http://n2t.net/addgene:31921 ; RRID:Addgene_31921) |
参考文献部分: | A photoswitchable orange-to-far-red fluorescent protein, PSmOrange. Subach OM, Patterson GH, Ting LM, Wang Y, Condeelis JS, Verkhusha VV. Nat Methods. 2011 Jul 31;8(9):771-7. doi: 10.1038/nmeth.1664. 10.1038/nmeth.1664 PubMed 21804536 |
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pMyosinPSmOrange载体基本信息
pMyosinPSmOrange载体图谱质粒图谱和多克隆位点信息
pMyosinPSmOrange载体简介
pMyosinPSmOrange载体序列
LOCUS pMyosin-PSmOrange 5210 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION synthetic circular DNA ACCESSION . VERSION . KEYWORDS pMyosin-PSmOrange SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 5210) AUTHORS Subach OM, Patterson GH, Ting LM, Wang Y, Condeelis JS, Verkhusha VV TITLE A photoswitchable orange-to-far-red fluorescent protein, PSmOrange. JOURNAL Nat Methods. 2011 Jul 31;8(9):771-7. doi: 10.1038/nmeth.1664. PUBMED 21804536 REFERENCE 2 (bases 1 to 5210) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..5210 /organism="synthetic DNA construct" /mol_type="other DNA" enhancer 61..364 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 365..568 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 519..539 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" regulatory 1159..1168 /regulatory_class="other" /note="vertebrate consensus sequence for strong initiation of translation (Kozak, 1987)" CDS 1165..1875 /codon_start=1 /product="orange to far-red photoswitchable variant of the monomeric fluorescent protein mOrange (Subach et al., 2011)" /label=PSmOrange /note="mammalian codon-optimized" /translation="MVSKGEENNMAIIKEFMRFKVRMEGTVNGHEFEIEGEGEGRPYEG FQTAKLKVTKGGPLPFAWDILSPLFTYGSKAYVKHPADIPDYFKLSFPEGFKWERVMNY EDGGVVTVTQDSSLQDGEFIYKVKMRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK GEIRMRLKLKDGGHYTSEVKTTYKAKKSVQLPGAYIVGIKLDITSHNEDYTIVEQYERA EGRHSTGGMDELYK" primer_bind 1772..1795 /label=DsRed1-C /note="DsRed1, forward primer" polyA_signal 1998..2119 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(2035..2054) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 2089..2108 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" rep_origin complement(2126..2581) /direction=LEFT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(2263..2284) /label=F1ori-F /note="F1 origin, forward primer" primer_bind 2475..2494 /label=F1ori-R /note="F1 origin, reverse primer" promoter 2608..2712 /gene="bla" /label=AmpR promoter promoter 2714..3071 /label=SV40 promoter /note="SV40 enhancer and early promoter" primer_bind complement(2737..2757) /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" rep_origin 2922..3057 /label=SV40 ori /note="SV40 origin of replication" primer_bind 2984..3003 /label=SV40pro-F /note="SV40 promoter/origin, forward primer" CDS 3106..3900 /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(3160..3179) /label=Neo-R /note="Neomycin resistance gene, reverse primer" primer_bind 3770..3789 /label=Neo-F /note="Neomycin resistance gene, forward primer" primer_bind complement(4088..4107) /label=TK-pA-R /note="Thymidine kinase polyA, reverse primer" polyA_signal 4132..4179 /label=HSV TK poly(A) signal /note="herpes simplex virus thymidine kinase polyadenylation signal (Cole and Stacy, 1985)" rep_origin 4508..5096 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 4997..5016 /label=pBR322ori-F /note="pBR322 origin, forward primer" ORIGIN 1 tagttattaa tagtaatcaa ttacggggtc attagttcat agcccatata tggagttccg 61 cgttacataa cttacggtaa atggcccgcc tggctgaccg cccaacgacc cccgcccatt 121 gacgtcaata atgacgtatg ttcccatagt aacgccaata gggactttcc attgacgtca 181 atgggtggag tatttacggt aaactgccca cttggcagta catcaagtgt atcatatgcc 241 aagtacgccc cctattgacg tcaatgacgg taaatggccc gcctggcatt atgcccagta 301 catgacctta tgggactttc ctacttggca gtacatctac gtattagtca tcgctattac 361 catggtgatg cggttttggc agtacatcaa tgggcgtgga tagcggtttg actcacgggg 421 atttccaagt ctccacccca ttgacgtcaa tgggagtttg ttttggcacc aaaatcaacg 481 ggactttcca aaatgtcgta acaactccgc cccattgacg caaatgggcg gtaggcgtgt 541 acggtgggag gtctatataa gcagagctgg tttagtgaac cgtcagatcc gctagcgcta 601 ccggactcag atctcgagct caagcttatg tcgagcaaga gagccaaggc caagaccacc 661 aagaagaggc cccagagggc tacgtccaat gtcttcgcca tgtttgacca gtcccagatc 721 caggagttta aggaggcctt caacatgatt gatcagaacc gcgatggctt cattgataag 781 gaggacctgc acgacatgtt ggcctctctg gggaagaacc ccacagacga gtacctggag 841 ggcatgatga acgaggcgcc agggcccatc aacttcacca tgttcctcac aatgtttggg 901 gagaagctga acggcacaga ccccgaggat gtgatccgca atgcctttgc ctgctttgat 961 gaggaggcct caggcttcat ccacgaggac cacctgaggg agctgctcac caccatgggc 1021 gaccgattca cggatgagga ggtggacgag atgtaccgcg aggcacccat tgataagaag 1081 ggcaacttca actacgtgga gttcactcgc atcctcaaac acggcgccaa ggacaaggac 1141 gacctggatc caccggtcgc caccatggtg agcaagggcg aggagaataa tatggccatc 1201 atcaaggagt tcatgcgctt caaggtgcgc atggagggca ccgtgaacgg ccacgagttc 1261 gagatcgagg gcgagggcga gggccgcccc tacgagggct ttcagaccgc taagctgaag 1321 gtgaccaagg gcggccccct gcccttcgcc tgggacatcc tgtcccctct cttcacctac 1381 ggctccaagg cctacgtgaa gcaccccgcc gacatccccg actacttcaa gctgtccttc 1441 cccgagggct tcaagtggga gcgcgtgatg aactacgagg acggcggcgt ggtgaccgtg 1501 acccaggact cctcactgca ggacggcgag ttcatctaca aggtgaagat gcgcggcacc 1561 aacttcccct ccgacggccc cgtgatgcag aagaagacca tgggctggga ggcctcctcc 1621 gagcggatgt accccgagga cggcgccctg aagggcgaga tcaggatgag gctgaagctg 1681 aaggacggcg gccactacac ctccgaggtc aagaccacct acaaggccaa gaagtccgtg 1741 cagctgcccg gcgcctacat cgtcggcatc aagctggaca tcacctccca caacgaggac 1801 tacaccatcg tggaacagta cgaacgcgcc gagggccgcc actccaccgg cggcatggac 1861 gagctgtaca agtaaagcgg ccgcgactct agatcataat cagccatacc acatttgtag 1921 aggttttact tgctttaaaa aacctcccac acctccccct gaacctgaaa cataaaatga 1981 atgcaattgt tgttgttaac ttgtttattg cagcttataa tggttacaaa taaagcaata 2041 gcatcacaaa tttcacaaat aaagcatttt tttcactgca ttctagttgt ggtttgtcca 2101 aactcatcaa tgtatcttaa ggcgtaaatt gtaagcgtta atattttgtt aaaattcgcg 2161 ttaaattttt gttaaatcag ctcatttttt aaccaatagg ccgaaatcgg caaaatccct 2221 tataaatcaa aagaatagac cgagataggg ttgagtgttg ttccagtttg gaacaagagt 2281 ccactattaa agaacgtgga ctccaacgtc aaagggcgaa aaaccgtcta tcagggcgat 2341 ggcccactac gtgaaccatc accctaatca agttttttgg ggtcgaggtg ccgtaaagca 2401 ctaaatcgga accctaaagg gagcccccga tttagagctt gacggggaaa gccggcgaac 2461 gtggcgagaa aggaagggaa gaaagcgaaa ggagcgggcg ctagggcgct ggcaagtgta 2521 gcggtcacgc tgcgcgtaac caccacaccc gccgcgctta atgcgccgct acagggcgcg 2581 tcaggtggca cttttcgggg aaatgtgcgc ggaaccccta tttgtttatt tttctaaata 2641 cattcaaata tgtatccgct catgagacaa taaccctgat aaatgcttca ataatattga 2701 aaaaggaaga gtcctgaggc ggaaagaacc agctgtggaa tgtgtgtcag ttagggtgtg 2761 gaaagtcccc aggctcccca gcaggcagaa gtatgcaaag catgcatctc aattagtcag 2821 caaccaggtg tggaaagtcc ccaggctccc cagcaggcag aagtatgcaa agcatgcatc 2881 tcaattagtc agcaaccata gtcccgcccc taactccgcc catcccgccc ctaactccgc 2941 ccagttccgc ccattctccg ccccatggct gactaatttt ttttatttat gcagaggccg 3001 aggccgcctc ggcctctgag ctattccaga agtagtgagg aggctttttt ggaggcctag 3061 gcttttgcaa agatcgatca agagacagga tgaggatcgt ttcgcatgat tgaacaagat 3121 ggattgcacg caggttctcc ggccgcttgg gtggagaggc tattcggcta tgactgggca 3181 caacagacaa tcggctgctc tgatgccgcc gtgttccggc tgtcagcgca ggggcgcccg 3241 gttctttttg tcaagaccga cctgtccggt gccctgaatg aactgcaaga cgaggcagcg 3301 cggctatcgt ggctggccac gacgggcgtt ccttgcgcag ctgtgctcga cgttgtcact 3361 gaagcgggaa gggactggct gctattgggc gaagtgccgg ggcaggatct cctgtcatct 3421 caccttgctc ctgccgagaa agtatccatc atggctgatg caatgcggcg gctgcatacg 3481 cttgatccgg ctacctgccc attcgaccac caagcgaaac atcgcatcga gcgagcacgt 3541 actcggatgg aagccggtct tgtcgatcag gatgatctgg acgaagagca tcaggggctc 3601 gcgccagccg aactgttcgc caggctcaag gcgagcatgc ccgacggcga ggatctcgtc 3661 gtgacccatg gcgatgcctg cttgccgaat atcatggtgg aaaatggccg cttttctgga 3721 ttcatcgact gtggccggct gggtgtggcg gaccgctatc aggacatagc gttggctacc 3781 cgtgatattg ctgaagagct tggcggcgaa tgggctgacc gcttcctcgt gctttacggt 3841 atcgccgctc ccgattcgca gcgcatcgcc ttctatcgcc ttcttgacga gttcttctga 3901 gcgggactct ggggttcgaa atgaccgacc aagcgacgcc caacctgcca tcacgagatt 3961 tcgattccac cgccgccttc tatgaaaggt tgggcttcgg aatcgttttc cgggacgccg 4021 gctggatgat cctccagcgc ggggatctca tgctggagtt cttcgcccac cctaggggga 4081 ggctaactga aacacggaag gagacaatac cggaaggaac ccgcgctatg acggcaataa 4141 aaagacagaa taaaacgcac ggtgttgggt cgtttgttca taaacgcggg gttcggtccc 4201 agggctggca ctctgtcgat accccaccga gaccccattg gggccaatac gcccgcgttt 4261 cttccttttc cccaccccac cccccaagtt cgggtgaagg cccagggctc gcagccaacg 4321 tcggggcggc aggccctgcc atagcctcag gttactcata tatactttag attgatttaa 4381 aacttcattt ttaatttaaa aggatctagg tgaagatcct ttttgataat ctcatgacca 4441 aaatccctta acgtgagttt tcgttccact gagcgtcaga ccccgtagaa aagatcaaag 4501 gatcttcttg agatcctttt tttctgcgcg taatctgctg cttgcaaaca aaaaaaccac 4561 cgctaccagc ggtggtttgt ttgccggatc aagagctacc aactcttttt ccgaaggtaa 4621 ctggcttcag cagagcgcag ataccaaata ctgtccttct agtgtagccg tagttaggcc 4681 accacttcaa gaactctgta gcaccgccta catacctcgc tctgctaatc ctgttaccag 4741 tggctgctgc cagtggcgat aagtcgtgtc ttaccgggtt ggactcaaga cgatagttac 4801 cggataaggc gcagcggtcg ggctgaacgg ggggttcgtg cacacagccc agcttggagc 4861 gaacgaccta caccgaactg agatacctac agcgtgagct atgagaaagc gccacgcttc 4921 ccgaagggag aaaggcggac aggtatccgg taagcggcag ggtcggaaca ggagagcgca 4981 cgagggagct tccaggggga aacgcctggt atctttatag tcctgtcggg tttcgccacc 5041 tctgacttga gcgtcgattt ttgtgatgct cgtcaggggg gcggagccta tggaaaaacg 5101 ccagcaacgc ggccttttta cggttcctgg ccttttgctg gccttttgct cacatgttct 5161 ttcctgcgtt atcccctgat tctgtggata accgtattac cgccatgcat //
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pMyosinPSmOrange载体质粒应用举例
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