质粒名称: | pOBCol2.3-GFPemd |
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出品公司: | 爱迪基因 |
目录编号: | 110210 |
存储实验室: | David Rowe |
载体骨架基本信息 |
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载体名称: | pUC18 |
载体出品公司: | -- |
载体抗性: | 氨苄青霉素 |
空载体大小: | 2700 bp |
完整质粒大小: | 7500 bp |
载体修饰: | MCS中的Hind3和EcoR1位点通过适配器转换成Sal1位点。 |
载体类型: | 哺乳细胞表达 |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | eGFPemerald,Emerald |
物种来源: | A. victoria |
插入大小: | 720 bp |
基因突变: | -- |
GenBank编号 | -- |
启动子 | 2.3 kb rat type 1 collagen + first intron |
标签/融合蛋白: | -- |
克隆方法: | 限制性内切酶 |
5' 克隆位点: | Hind3(克隆过程中销毁) |
3' 克隆位点: | EcoR1(克隆过程中销毁) |
5' 测序引物 | M13reverse |
3' 测序引物 | M13forward |
文献引用方法 |
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材料和方法部分: | pOBCol2.3-GFPemd was a gift from David Rowe (Addgene plasmid # 110210 ; http://n2t.net/addgene:110210 ; RRID:Addgene_110210) |
参考文献部分: | Use of type I collagen green fluorescent protein transgenes to identify subpopulations of cells at different stages of the osteoblast lineage. Kalajzic I, Kalajzic Z, Kaliterna M, Gronowicz G, Clark SH, Lichtler AC, Rowe D. J Bone Miner Res. 2002 Jan;17(1):15-25. doi: 10.1359/jbmr.2002.17.1.15. 10.1359/jbmr.2002.17.1.15 PubMed 11771662 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pOBCol2.3-GFPemd 7627 bp ds-DNA circular SYN 07-AUG-2018 DEFINITION Labels cells in the late osteoblast lineage.. ACCESSION . VERSION . KEYWORDS pOBCol2.3-GFPemd SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7627) AUTHORS Kalajzic I, Kalajzic Z, Kaliterna M, Gronowicz G, Clark SH, Lichtler AC, Rowe D TITLE Use of type I collagen green fluorescent protein transgenes to identify subpopulations of cells at different stages of the osteoblast lineage. JOURNAL J Bone Miner Res. 2002 Jan;17(1):15-25. doi: 10.1359/jbmr.2002.17.1.15. PUBMED 11771662 REFERENCE 2 (bases 1 to 7627) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 7, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..7627 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind 10..32 /label=M13/pUC Forward /note="In lacZ gene" primer_bind 24..41 /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind 25..41 /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" regulatory 4125..4134 /regulatory_class="other" /note="vertebrate consensus sequence for strong initiation of translation (Kozak, 1987)" CDS 4131..4850 /codon_start=1 /product="Emerald GFP" /label=EmGFP /note="mammalian codon-optimized" /translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL KFICTTGKLPVPWPTLVTTLTYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHKVYITADKQKNGIK VNFKTRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL EFVTAAGITLGMDELYK" primer_bind complement(4176..4197) /label=EGFP-N /note="EGFP, reverse primer" primer_bind complement(4437..4456) /label=EXFP-R /note="For distinguishing EGFP variants, reverse primer" primer_bind 4784..4805 /label=EGFP-C /note="EGFP, forward primer" polyA_signal 4883..5017 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(4920..4939) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 4974..4993 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" primer_bind complement(5052..5068) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(5052..5068) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(5065..5087) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 5076..5092 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(5100..5130) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 5145..5166 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(5283..5300) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(5454..6042) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(5534..5553) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(6213..7073) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 6836..6855 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(7074..7178) /gene="bla" /label=AmpR promoter primer_bind 7246..7264 /label=pBRforEco /note="pBR322 vectors, upsteam of EcoRI site, forward primer" primer_bind complement(7302..7324) /label=pGEX 3' /note="pGEX vectors, reverse primer" primer_bind 7424..7443 /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" ORIGIN 1 cagggttttc ccagtcacga cgttgtaaaa cgacggccag tgccaagctg cgtcgacgca 61 gcttggaacc cactgcccac aactcctggg gcaaaaacct ggagtcagac atggggtgaa 121 ggctgtcaca cggcacagac acgtcaagca ccccccccaa ttctagtagt ctcctagcct 181 ccaccagaac cccagaccct tgatgtggca gtcaccagtc cacacctgtt aggctcttgt 241 ctcttcttcc agatgagcct ggggggcggg ggggtgctag atcaggagca gggaaaagta 301 gctttggata agtgcttttc ccaatacaaa acccaacaaa gagtgggcag atcacactgt 361 gtagtgcttc gtggaaccct accctagaca actgccttga acacctattc cctctgatgt 421 acaccatccc cgtccactgt tagggagtgg gcatcctttg gaactgacca ctgtggaagg 481 caggacttta ctgagttccg gaactaccat ctcagcttct cagccccagc cttaccctac 541 aggcactggc ataggcgggg gcagatcctg ggccacaagt cactgccaca tggttgggat 601 aattgatgaa gtcctgtcct tccattgctg tctccagttc tgcttctctg gaaactctat 661 atttttccct ttaattatag cctctgcagt ctccctctgc caccccaccc gcaccgctta 721 gcctaactgc ccacggccag cgacgtggct ccctcccctt ctgctccctt ggtctttttt 781 attttttttt ctttgccttc gttgcacaaa actagctcag ggagggcgtg aagggggggg 841 gagcaatgga atcttggatg gtttggagga ggcgggactc cttgcttcca cgtttacagc 901 tctgaagacg gctgtggggg aagtgataca ggacgtctat gggccctgag aggagacccc 961 tatgcttccc tgccacccac acagtttaac aaaatgaagt tcctaagtag agtgggggtc 1021 aggcagagca cctttgcagg gttgatggga gcccagggaa agaaaggaca ctgtctttta 1081 gggacacatt taaatataag ccacttttct tgggggacga caaatgaccc tttcctgatt 1141 gcagaggtgg ggaacaatgg ctgagatttt cagcaaagaa gcgaggacat gaggagtagc 1201 cttcaaataa agtcactcag ctaccaaaaa caagtttctg ccacacaccg agttcaccta 1261 ggtgtcccca gaccagatcc aagtacagta aggaaagcag gttctctaca gagagaacac 1321 ggctctatgg ccaatgcctt ctacctgctc tttctggatt gatactgcta cctaagaggg 1381 cctctaacca attcctggct gtagccacag ctgacacaag acctttttct aagacatccc 1441 tggtcacagg cctcctgtag caaattccag ccctgggatg gaggtggtca ggaaagagtt 1501 tatacaagaa gacccaggcc acagctttaa ggactcagaa acccccctgc ccacacggct 1561 gcccatcata acgcagaagg tttcttctgg aaggacaagg atgtcaaact tctccccaag 1621 cctaatcctc agagatgtct ccctctgtta cacctggggc tggagaaagg tgggtctttc 1681 atggagccac attcatggca gaacagatag ccaccccact cctttcaaac aaccacatat 1741 ctgactctta gtatctgtga agagatgtct aatttgttcc caaatattcc taccctgcat 1801 acctgggccc acaccatgag gtattctcct ccctctaaca gtcacatctg cttagctgcc 1861 tggttcttcg gatttggaga gatgcttgcc taacttattc ttccttaggt cttcccaagg 1921 atgccagaaa gactatgaga catggccaag aggacctttt cccaattgtg cctgacactg 1981 aaccctttgt aatgttcccc aactcagatt cccaattcta catccttctg atttgaggtc 2041 ccagaaggaa agtgcaaggg gcatccccta cccacaatca gtatatcgag ggcccagcca 2101 cactcagtga tagcacctct ggcccatgta gatctggggg acaagggtgg cagaattgca 2161 aaggggggag ggggctgggt ggactccttt cccttccttt ccctcctccc ccctcttcgt 2221 tccaaattgg gggccgggcc aggcagttct gattggctgg gggccgggct gctggctccc 2281 cctctccaag aggcagggtt cctcccagcc ctcctccatc aggatggtat aaaaggggcc 2341 caggccagtc gtcggagcag acgggagttt cacctccgga cggagcagga ggcacacgga 2401 gtgaggccac gcatgagccg aagctaaccc cccaccccag ccgcaaagag tctacatgtc 2461 tagggtctag aggcggccgc cttcagcttt gtggacctcc ggctcctgct cctcttaggg 2521 gccactgccc tcctgacgca tggccaagaa gacagtaagt tccaaactct ggggaggtta 2581 tggtttcttg ctatcgcgtt ctgcataggg gtcctagcaa taaagactta aacggaagcg 2641 cggggtgctc cagagttagg agggatgaga aggtgatgga gaggaactgg gaagagagag 2701 gtcaccctcg cgagcagagg agagtgagcg gatctcagaa gtggagccct ggttgagatg 2761 gcacggcagg aaatttcaag catctatctg tagcgcgacg ggaaaagtgg gaatctgggc 2821 aggggttggg tcagagtacg tcgaagatca aataagacct ctggaataga gattcgaagc 2881 tcaagatgta aaagcaatca aaaaggctgc gggatgattc ataaggaaag attgtttgcc 2941 ctctctgcag gctagacagt gttgctgggg cctccggggt gctgggctct gggagtgggg 3001 tggggggagg aagggacgca cggagagggc gggttgctgg atgagaaagt ttggctaaga 3061 cttgactggg cgcggtccct gtgcctcctg ctggtcaacc ttgagcacta cgagtcctgg 3121 tacagtactt tacagcgcgc gggcttaaga gggaaaacct gggctattgc cgggcctgga 3181 ccctcatctc cagactagga aaataaaagc acagatggat gtgatagctt tggtctttga 3241 aagtgaccca ggccagtaaa attgggtccg ccccgtgcat tgcttagcgt tgcccgccac 3301 ctagtggttg ctttgatccg gtgctagaga ggtgggcgtg gttaactaat cattgctatt 3361 tgtagacttg agttctttct ttggctaagg agtgacccca aagctctact ggctttgaag 3421 gaaggaccgg gcaagctttg attcctggga gcggagagtt agggtgtatc taactttagg 3481 gatatatttt actactctgg acaaggctcc acggaagtca ccctcctcca ttttagcccc 3541 gcccattccg tcccacctgc ccaaggaaag gaggtgggac cagggctgga atttcccttc 3601 tctcctccca cccccgcctc cggtctcccc gcaaaccacg tcccacaaac ttccacctac 3661 tttgtaggag ccctcctact ctccgtcagg aggacttcta tttcatttgg ttcccgcgcg 3721 cgtgggctga agttgagttt ggaagcaacc ccagtctaaa gctttgttta aattcctggg 3781 aacttggaag taacagccct ggccaggctt cttggtgctg tcactgaacg ccgttacaga 3841 gcagacctgc atttaaggat ttaagggaag aaaatagggg ttgggggaag atgtgggaag 3901 tggaaaatct acgtgcacct cttagacagg ggaaagggtg agtaaggctg ggatccggtg 3961 gtggtgcaaa tcaaagaact gctcctcagt ggatgttgcc tttacttcta ggcctgtacg 4021 gaagtgttac ttctgctcta aaagctgctg caggtcttag ttaactaaga ctctagggaa 4081 gatcccccat caagctagct tggcattccg gtactgttgg taaagccacc atggtgagca 4141 agggcgagga gctgttcacc ggggtggtgc ccatcctggt cgagctggac ggcgacgtaa 4201 acggccacaa gttcagcgtg tccggcgagg gcgagggcga tgccacctac ggcaagctga 4261 ccctgaagtt catctgcacc accggcaagc tgcccgtgcc ctggcccacc ctcgtgacca 4321 ccttgaccta cggcgtgcag tgcttcgccc gctaccccga ccacatgaag cagcacgact 4381 tcttcaagtc cgccatgccc gaaggctacg tccaggagcg caccatcttc ttcaaggacg 4441 acggcaacta caagacccgc gccgaggtga agttcgaggg cgacaccctg gtgaaccgca 4501 tcgagctgaa gggcatcgac ttcaaggagg acggcaacat cctggggcac aagctggagt 4561 acaactacaa cagccacaag gtctatatca ccgccgacaa gcagaagaac ggcatcaagg 4621 tgaacttcaa gacccgccac aacatcgagg acggcagcgt gcagctcgcc gaccactacc 4681 agcagaacac ccccatcggc gacggccccg tgctgctgcc cgacaaccac tacctgagca 4741 cccagtccgc cctgagcaaa gaccccaacg agaagcgcga tcacatggtc ctgctggagt 4801 tcgtgaccgc cgccgggatc actctcggca tggacgagct gtacaagtaa ctcgactaga 4861 gtcggggcgg ccgacctcga ggaacttgtt tattgcagct tataatggtt acaaataaag 4921 caatagcatc acaaatttca caaataaagc atttttttca ctgcattcta gttgtggttt 4981 gtccaaactc atcaatgtat cttatcatgt ctggatcgat cccccgaatt ggtcgaccaa 5041 ttcgtaatca tgtcatagct gtttcctgtg tgaaattgtt atccgctcac aattccacac 5101 aacatacgag ccggaagcat aaagtgtaaa gcctggggtg cctaatgagt gagctaactc 5161 acattaattg cgttgcgctc actgcccgct ttccagtcgg gaaacctgtc gtgccagctg 5221 cattaatgaa tcggccaacg cgcggggaga ggcggtttgc gtattgggcg ctcttccgct 5281 tcctcgctca ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt atcagctcac 5341 tcaaaggcgg taatacggtt atccacagaa tcaggggata acgcaggaaa gaacatgtga 5401 gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc gtttttccat 5461 aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag gtggcgaaac 5521 ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt gcgctctcct 5581 gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg 5641 ctttctcata gctcacgctg taggtatctc agttcggtgt aggtcgttcg ctccaagctg 5701 ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg taactatcgt 5761 cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac tggtaacagg 5821 attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg gcctaactac 5881 ggctacacta gaagaacagt atttggtatc tgcgctctgc tgaagccagt taccttcgga 5941 aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg tggttttttt 6001 gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt 6061 tctacggggt ctgacgctca gtggaacgaa aactcacgtt aagggatttt ggtcatgaga 6121 ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa aatgaagttt taaatcaatc 6181 taaagtatat atgagtaaac ttggtctgac agttaccaat gcttaatcag tgaggcacct 6241 atctcagcga tctgtctatt tcgttcatcc atagttgcct gactccccgt cgtgtagata 6301 actacgatac gggagggctt accatctggc cccagtgctg caatgatacc gcgagaccca 6361 cgctcaccgg ctccagattt atcagcaata aaccagccag ccggaagggc cgagcgcaga 6421 agtggtcctg caactttatc cgcctccatc cagtctatta attgttgccg ggaagctaga 6481 gtaagtagtt cgccagttaa tagtttgcgc aacgttgttg ccattgctac aggcatcgtg 6541 gtgtcacgct cgtcgtttgg tatggcttca ttcagctccg gttcccaacg atcaaggcga 6601 gttacatgat cccccatgtt gtgcaaaaaa gcggttagct ccttcggtcc tccgatcgtt 6661 gtcagaagta agttggccgc agtgttatca ctcatggtta tggcagcact gcataattct 6721 cttactgtca tgccatccgt aagatgcttt tctgtgactg gtgagtactc aaccaagtca 6781 ttctgagaat agtgtatgcg gcgaccgagt tgctcttgcc cggcgtcaat acgggataat 6841 accgcgccac atagcagaac tttaaaagtg ctcatcattg gaaaacgttc ttcggggcga 6901 aaactctcaa ggatcttacc gctgttgaga tccagttcga tgtaacccac tcgtgcaccc 6961 aactgatctt cagcatcttt tactttcacc agcgtttctg ggtgagcaaa aacaggaagg 7021 caaaatgccg caaaaaaggg aataagggcg acacggaaat gttgaatact catactcttc 7081 ctttttcaat attattgaag catttatcag ggttattgtc tcatgagcgg atacatattt 7141 gaatgtattt agaaaaataa acaaataggg gttccgcgca catttccccg aaaagtgcca 7201 cctgacgtct aagaaaccat tattatcatg acattaacct ataaaaatag gcgtatcacg 7261 aggccctttc gtctcgcgcg tttcggtgat gacggtgaaa acctctgaca catgcagctc 7321 ccggagacgg tcacagcttg tctgtaagcg gatgccggga gcagacaagc ccgtcagggc 7381 gcgtcagcgg gtgttggcgg gtgtcggggc tggcttaact atgcggcatc agagcagatt 7441 gtactgagag tgcaccatat gcggtgtgaa ataccgcaca gatgcgtaag gagaaaatac 7501 cgcatcaggc gccattcgcc attcaggctg cgcaactgtt gggaagggcg atcggtgcgg 7561 gcctcttcgc tattacgcca gctggcgaaa gggggatgtg ctgcaaggcg attaagttgg 7621 gtaacgc //
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