质粒名称: | pTTCC |
---|---|
出品公司: | Addgene |
目录编号: | 164264 |
存储实验室: | Gudmundur Hreggvidsson |
载体骨架基本信息 |
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载体名称: | pLEI250.2 |
载体出品公司: | Lei Wang, Universitat Stuttgart |
空载体大小: | 5371 bp |
完整质粒大小: | 7778 bp |
载体修饰: | BbsI限制站点已删除 |
载体类型: | 细菌表达 |
筛选标记: | -- |
载体抗性: | 卡那霉素50 μg/mL |
生长温度: | 37 ℃ |
宿主菌: | NEB Stable |
拷贝数: | -- |
插入基因信息 |
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插入基因名称: | Cas9 |
物种来源: | Synthetic; Synthesized, codon optimized Cas9 gene from Geobacillus sp. LC300 |
插入大小: | 3264 bp |
基因突变: | -- |
GenBank编号 | AKU27017.1 |
启动子: | Pcel |
标签/融合蛋白: | -- |
克隆方法: | 限制性内切酶 |
5’克隆位点: | NdeI(未破坏) |
3’克隆位点: | HindIII(未破坏) |
5’测序引物 | -- |
3’测序引物 | -- |
文献引用方法 |
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材料和方法部分: | pTTCC was a gift from Gudmundur Hreggvidsson (Addgene plasmid # 164264 ; http://n2t.net/addgene:164264 ; RRID:Addgene_164264) |
参考文献部分: | Efficient genome editing of an extreme thermophile, Thermus thermophilus, using a thermostable Cas9 variant. Adalsteinsson, Bjorn Thor, Kristjansdottir, Thordis, Merre, William, Helleux, Alexandra, Dusaucy, Julia, Tourigny, Mathilde, Fridjonsson, Olafur & Hreggvidsson, Gudmundur Oli. Scientific Reports volume 11, Article number: 9586 (2021) 10.1038/s41598-021-89029-2 |
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载体基本信息
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载体序列
LOCUS pTTCC 7778 bp ds-DNA circular SYN 13-MAY-2021 DEFINITION Expresses a thermostable Cas9 enzyme and gRNA in Thermus thermophilus. ACCESSION . VERSION . KEYWORDS pTTCC SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7778) AUTHORS Adalsteinsson, Bjorn Thor, Kristjansdottir, Thordis, Merre, William, Helleux, Alexandra, Dusaucy, Julia, Tourigny, Mathilde, Fridjonsson, TITLE Efficient genome editing of an extreme thermophile, Thermus thermophilus, using a thermostable Cas9 variant JOURNAL Scientific Reports volume 11, Article number: 9586 (2021) REFERENCE 2 (bases 1 to 7778) AUTHORS . TITLE Direct Submission JOURNAL Exported May 13, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..7778 /organism="synthetic DNA construct" /mol_type="other DNA" primer_bind complement(3485..3502) /label=pBAD Reverse /note="For vectors with E. coli araBAD promoter, reverse primer" terminator 3655..3726 /label=rrnB T1 terminator /note="transcription terminator T1 from the E. coli rrnB gene" RBS 3912..3920 /label=Shine-Dalgarno sequence /note="full consensus sequence for ribosome-binding sites upstream of start codons in E. coli; complementary to a region in the 3' end of the 16S rRNA (Chen et al., 1994)" promoter 6564..6593 /label=trc promoter /note="strong E. coli promoter; hybrid between the trp and lac UV5 promoters" RBS 6608..6616 /label=Shine-Dalgarno sequence /note="full consensus sequence for ribosome-binding sites upstream of start codons in E. coli; complementary to a region in the 3' end of the 16S rRNA (Chen et al., 1994)" CDS 6622..6795 /codon_start=1 /gene="lacZ fragment" /product="LacZ-alpha fragment of beta-galactosidase" /label=lacZ-alpha /translation="MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEART DRPSQQLRSLNGE" primer_bind complement(6642..6659) /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind complement(6642..6658) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind complement(6651..6673) /label=M13/pUC Forward /note="In lacZ gene" rep_origin complement(7147..7735) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(7227..7246) /label=pBR322ori-F /note="pBR322 origin, forward primer" ORIGIN 1 acgaaaactc acgttaaggg attttggtca tgaattcgct agagtcgacc ccggggcgcg 61 aggggaggag ggctcgaggc ccccctcttg caagcgcttt caacagatgc tatactcccg 121 ggcaaagatg accaaggctc gccccaccat cgccgaaact agttcttgga ggagaaacgc 181 atatgcgcta caagatcggc ctggacatcg gcatcaccag cgtgggctgg gcggtgatca 241 acctcgatat tccgcggatc gaggacctgg gtgtccggat tttcgatcgc gccgaaaatc 301 cgcaaacggg agaaagcctg gccctgcccc gtcggctggc gcgcagcgcc cggcgtcgcc 361 tccgccgccg gaaacatcgc ctggaacgca ttcgccgtct gatcatccgg gaagggatcc 421 tgacgaagga ggagctggac aagctgtttg aggagaagca cgagatcgat gtctggcagc 481 tccgggtgga ggcgctggac cggaagctca acaacgacga gctggcgcgg gtcctgctgc 541 atctggccaa gcgccggggc ttcaaaagca accgcaagtc ggaacgctcg aacaaggaga 601 actcgacgat gctgaagcac atcgaggaga accgcgccat cctgtcctcg tatcgcaccg 661 tcggcgagat gatcgtgaaa gacccgaagt ttgccctgca caaacgtaac aagggcgaga 721 actacaccaa taccattgcc cgcgacgacc tggagcggga gatccggctc atcttctcga 781 agcagcgcga atttgggaac atgtcgtgca ccgaggagtt cgagaacgaa tacattgcca 841 tctgggcctc gcagcggccg gtggcgtcga aggacgacat tgagaagaag gtggggttct 901 gcacgttcga accgaaggag aagcgggcgc cgaaagccac gtacacgttc cagtcgttca 961 tcgcgtggga gcacatcaac aaactccggc tgatctcgcc gtcggggacc cgcggcctga 1021 cggatgagga acggcgcctc ctgtacgagc aggccttcca gaagaacaag atcacgtacc 1081 acgacatccg cacgctgctg cacctgccgg atgatacgta ttttaagggc attgtgtatg 1141 accgtggcga gtcgcggaaa cagaacgaga acatccggtt cctggagctc gacgcgtacc 1201 accaaatccg gaaggccgtg gacaaagtgt acggcaaagg caaatcgtcc tccttcctgc 1261 cgatcgactt cgataccttc ggatatgccc tgaccctgtt caaagacgac gcggacattc 1321 ggagctatct ccggaacgaa tacgagcaga acggtaaacg catgccgaac ctggccaaca 1381 aggtctacga caatgaactc atcgaagaac tgctcaacct gtccttcacg aagtttggcc 1441 acctgagcct gaaggccctg cgcagcatcc tcccctacat ggagcagggc gaagtgtaca 1501 gctcggcctg tgagcgcgcg ggatacacct tcacgggccc caagaagaag caaaagacga 1561 tgctgctgcc gaacattccg cccatcgcca accccgtggt catgcgggcc ctgacgcagg 1621 cccggaaggt ggtgaacgcg atcatcaaga agtacggaag ccccgtgtcg atccacatcg 1681 aactggcccg ggacctgtcg cagacgttcg acgaacgccg caaaaccaag aaggaacagg 1741 atgagaaccg caagaagaac gaaacggcca tccgccagct gatggagtac ggactgacgc 1801 tgaatccgac gggtcacgac atcgtgaaat tcaaactgtg gtcggagcag aacggccgct 1861 gcgcctattc gctgcagccc atcgaaatcg agcggctcct ggaaccgggc tacacggagg 1921 tggaccacgt cattccgtac tcgcgctccc tggatgactc ctacaccaac aaggtgctgg 1981 tcctcacgaa ggagaatcgc gagaagggta accgcatccc ggccgagtat ctgggcgtgg 2041 gcacggagcg ctggcagcag ttcgagacgt ttgtcctgac gaacaaacag ttcagcaaga 2101 agaaacgcga ccggctgctg cgcctgcatt acgacgaaaa cgaggaaacg gagttcaaga 2161 accgcaacct gaacgacacg cgctacatca gccggttctt cgcgaacttc atccgcgagc 2221 acctcaagtt cgcggaatcg gacgataagc agaaggtgta caccgtcaac ggccgtgtga 2281 cggcgcatct gcgctcgcgc tgggagttca acaagaaccg cgaagaatcg gatctgcacc 2341 acgccgtgga cgccgtgatc gtggcctgca cgaccccgtc ggacatcgcc aaggtgaccg 2401 ccttctatca gcgccgcgag cagaacaagg aactggccaa aaagaccgaa ccgcatttcc 2461 cgcagccgtg gccgcatttt gccgatgagc tgcgcgcgcg cctgtcgaag cacccgaaag 2521 aatcgatcaa ggccctgaac ctggggaact atgacgacca gaagctggag tccctgcagc 2581 ccgtgttcgt ctcccggatg cccaagcgca gcgtcacggg cgcggcccat caggaaacgc 2641 tgcgccgcta cgtgggcatc gacgaacgtt cggggaagat tcagacggtg gtgaaaacca 2701 agctgagcga aatcaagctc gatgcgtcgg gccactttcc catgtacggg aaggagagcg 2761 atccccgtac ctacgaggcg atccggcagc gcctgctgga acacaacaac gaccccaaga 2821 aagcctttca ggagcccctc tacaagccga agaagaacgg tgagccgggc ccggtcattc 2881 ggaccgtgaa gatcatcgac acgaagaacc aggtgattcc gctgaacgat gggaaaacgg 2941 tggcctacaa ctcgaatatc gtgcgggtgg acgtgttcga gaaggacggc aagtactact 3001 gcgtccccgt ctatacgatg gacatcatga agggcatcct gcccaataag gccattgagc 3061 cgaacaagcc gtacagcgaa tggaaggaga tgacggagga ctacacgttc cggttctcgc 3121 tctaccccaa cgatctgatc cgcatcgaac tgccgcgtga aaagatcatt aagacggccg 3181 gcggcgagga aatcaaaatc aaggatctct ttgcgtacta caaaaccatc cactcgggga 3241 ccgccggcct ggagctggtc agccacgact gctcgttcag cctgtccggc gtgggttcgc 3301 gcacgctgaa gcgctttgag aagtaccagg tggacgtgct gggcaacatc tacaaagtgc 3361 gcggcgagaa gcgggtgggc ctggcgagct cggcccacag caagaccggt gagacgattc 3421 gcccgctgca gtcgacgcgg gactagaagc ttggctgttt tggcggatga gagaagattt 3481 tcagcctgat acagattaaa tcagaacgca gaagcggtct gataaaacag aatttgcctg 3541 gcggcagtag cgcggtggtc ccacctgacc ccatgccgaa ctcagaagtg aaacgccgta 3601 gcgccgatgg tagtgtgggg tctccccatg cgagagtagg gaactgccag gcatcaaata 3661 aaacgaaagg ctcagtcgaa agactgggcc tttcgtttta tctgttgttt gtcggtgaac 3721 gctctcctgc tagcgggagt ataacagaaa ccttaaggcc cgaccgcttg acaagggcgc 3781 gtgaggtttt tacgatagcg ccggatgcgg ggaaaaaggg ctccttttgg ggggttttcc 3841 ccgcaccggg cggacctggg cggagaggaa acgcggcaac tcgcccgtct cgggttcccg 3901 cccacgaccc ttaaggaggt gtgaggatta tgaatggacc aataataatg actagagaag 3961 aaagaatgaa gattgttcat gaaattaagg aacgaatatt ggataaatat ggggatgatg 4021 ttaaggctat tggtgtttat ggctctcttg gtcgtcagac tgatgggccc tattcggata 4081 ttgagatgat gtgtgtcatg tcaacagagg aagcagagtt cagccatgaa tggacaaccg 4141 gtgagtggaa ggtggaagtg aatttttata gcgaagagat tctactagat tatgcatctc 4201 aggtggaatc agattggccg cttacacatg gtcaattttt ctctattttg ccgatttatg 4261 attcaggtgg atacttagag aaagtgtatc aaactgctaa atcggtagaa gcccaaaagt 4321 tccacgatgc gatttgtgcc cttatcgtag aagagctgtt tgaatatgca ggcaaatggc 4381 gtaatattcg tgtgcaagga ccgacaacat ttctaccatc cttgacggta caggtagcaa 4441 tggcaggtgc catgttgatt ggtctgcatc atcgcatctg ttatacgacg agcgcttcgg 4501 tcttaactga agcagttaag caatcagatc ttccttcagg ttatgaccat ctgtgccagt 4561 tcgtaatgtc tggtcaactt tccgactctg agaaacttct ggaatcgcta gagaatttct 4621 ggaatgggat tcaggagtgg acagaacgac acggatatat agtggatgtg tcaaaacgca 4681 taccattttg acaattgctg cagactagat gggggttgcc agcgcctcca atttttcaag 4741 tgaaatctat aacgcctgtt ggcatgcctc agttgacccc attgaccctt ctctctggag 4801 gtggtagcta gaggggaatg gtcccaccct ggagccccac cccttgccaa ccctgggccc 4861 ggtataatgc cgggcaatgg gacgaccggg ccccctgggg gcccaaggcg gcagggccgc 4921 gtgaggacca aaaagagagg ctcccgctgg gagggaaccc aaattccagc aaccttttcc 4981 ttcgcctaag gttatcccct cccagcggga aaggcaatag gcgccaaggc ggcgcgcggg 5041 ggagtgccgt ctccgacgcg cgaaacggga ggggtttatg ccccaagaag gagttgaagg 5101 gaagagctat aaagaacagc cggaaggact caccgagcgg ggccgggcct tcctcgaggc 5161 cctggcccgg aggaagcggg cgaggggcga ggagcttccg cccctctacc tgaagctcct 5221 ggagggggcc gcgcccccgg agaagggggt ccatgagccc ccgcccgagg aggcgcctcc 5281 cccggaggac ctccgccgga agctccggga ggcgccgcct tccccggccc tccccaaccg 5341 acaggagctc tccgcctccc cgcccccgcc cgagatgagg cgggacgcct ggagcctcgc 5401 cgaccgcctc ctggaggagg gggagcggcg gggcaccctg ccagggcttt ccgagcggga 5461 gcggagggtg taccggaccc tcctcgccct gggcctcgag gtcctggccc ggaggctggg 5521 cccggggagg cccttgccca ggaacctgtc ccaggtctcc ttcttcgccg tgaacgacgc 5581 cctggccgtg gccctgggaa tccccccggc ctccctctac cgggtcctgg cctccctgga 5641 ggccaagggg ctcatccgcc ggagggcctg gcgcaccccg gccaccctca agggccggac 5701 gggggtctac gccggcggga ccctctacgc cgtgcgcctg ccccaccggg aggcccgccc 5761 ccgcctggac ccggaggact tccgccaccc ctggcgggac ctggaggggg acgcccgtca 5821 ggggcgcacc gcctggagct tgagagagtc atatacaagt cctcctaagg aggactccgg 5881 ggtcctccag ctcctccttc ggttttcgtt atcccctggc gaagccgaaa ctccgttagc 5941 tttagactct ctcaccgccc tcctccgggc ccgccccgcc gagcgccggg ccctggtgga 6001 ggccctcgcc ctctccctgg cccgggagtt ccgggacccc gggagcgtgc gcttctacgc 6061 ctgggtcctc tggaacgccc tccgggccga gctctacggc ctgatggagg gggccctcga 6121 ggccgtcgcc tgggcggtcc ggcgggcgcg ggaggccgcg gccaaggtcc tctggagccc 6181 gaggggcgag ggggtccggc gccccggggc cctcctcgcc cacctcctcc gggagcgggg 6241 cctcctggag ctcttccgcc aggcccctca gtggcgggtg gcgtagggct cccgccgggc 6301 taagctggag gtagcccatc cagggcctct ggggggtggc ttgtgtatca agactggctg 6361 ttcaaggact gcccaggggg ctggcgcctc cgctaccgcc ggaacggggg cggctacgag 6421 gcctcccggg acggtgagag gtgggagaag gtcccctcgg tcacggaggt tacggggcgc 6481 ctgaacaaga accttcagga ctgggccgtg cgccaggtgg tggagtacct ccagggggag 6541 ctggtcccgg gggtactgag ctgttgacaa ttaatcatcc ggctcgtata atgtgtggaa 6601 cgtcttctaa ggaggtcaca tatgaccatg attacggatt cactggccgt cgttttacaa 6661 cgtcgtgact gggaaaaccc tggcgttacc caacttaatc gccttgcagc acatccccct 6721 ttcgccagct ggcgtaatag cgaagaggcc cgcaccgatc gcccttccca acagttgcgc 6781 agcctgaatg gcgaatagga agactagtca tagttcccct gagattatcg ctgtggtata 6841 atatcatacc acagcaatga tctcagggtt actatgataa gggctttctg cctaaggcag 6901 actgacccgc ggcgttgggg atcgcctgtc gcccgctttt ggcgggcatt ccccatcctt 6961 gcgcaaactc agaccttggc ggaaaacgct aaggtctttt ggtaccaccg aattccgagc 7021 ggtatcagct cactcaaagg cggtaatacg gttatccaca gaatcagggg ataacgcagg 7081 aaagaacatg tgagcaaaag gccagcaaaa ggccaggaac cgtaaaaagg ccgcgttgct 7141 ggcgtttttc cataggctcc gcccccctga cgagcatcac aaaaatcgac gctcaagtca 7201 gaggtggcga aacccgacag gactataaag ataccaggcg tttccccctg gaagctccct 7261 cgtgcgctct cctgttccga ccctgccgct taccggatac ctgtccgcct ttctcccttc 7321 gggaagcgtg gcgctttctc atagctcacg ctgtaggtat ctcagttcgg tgtaggtcgt 7381 tcgctccaag ctgggctgtg tgcacgaacc ccccgttcag cccgaccgct gcgccttatc 7441 cggtaactat cgtcttgagt ccaacccggt aagacacgac ttatcgccac tggcagcagc 7501 cactggtaac aggattagca gagcgaggta tgtaggcggt gctacagagt tcttgaagtg 7561 gtggcctaac tacggctaca ctagaagaac agtatttggt atctgcgctc tgctgaagcc 7621 agttaccttc ggaaaaagag ttggtagctc ttgatccggc aaacaaacca ccgctggtag 7681 cggtggtttt tttgtttgca agcagcagat tacgcgcaga aaaaaaggat ctcaagaaga 7741 tcctttgatc ttttctacgg ggtctgacgc tcagtgga //
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