质粒名称: | pCRISPRainbow-DONOR1 |
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出品公司: | Addgene |
目录编号: | 75398 |
存储实验室: | Thoru Pederson |
载体骨架基本信息 |
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载体名称: | pUC19 |
载体抗性: | 氯霉素和氨苄青霉素 |
空载体大小: | 2000 bp |
完整质粒大小: | 3524 bp |
载体类型: | CRISPR |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | Cm(R)-CcdB |
启动子 | Bacteria |
克隆方法: | 限制性内切酶 |
5' 克隆位点: | Mlu I(未破坏) |
3' 克隆位点: | Pci I (未破坏) |
5' 测序引物 | GCTACAACAAGGCAAGGCTTGACCGA |
3' 测序引物 | AACGCCAGCAACGCGGCCTT |
文献引用方法 |
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材料和方法部分: | pCRISPRainbow-DONOR1 was a gift from Thoru Pederson (Addgene plasmid # 75398 ; http://n2t.net/addgene:75398 ; RRID:Addgene_75398) |
参考文献部分: | Multiplexed labeling of genomic loci with dCas9 and engineered sgRNAs using CRISPRainbow. Ma H, Tu LC, Naseri A, Huisman M, Zhang S, Grunwald D, Pederson T. Nat Biotechnol. 2016 Apr 18. doi: 10.1038/nbt.3526. 10.1038/nbt.3526 PubMed 27088723 |
买家导航
pCRISPRainbowDONOR1载体基本信息
pCRISPRainbowDONOR1载体图谱质粒图谱和多克隆位点信息
pCRISPRainbowDONOR1载体简介
pCRISPRainbowDONOR1载体序列
LOCUS pCRISPRainbow-DONOR1 3527 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION CRISPRainbow-DONOR1. ACCESSION . VERSION . KEYWORDS pCRISPRainbow-DONOR1 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 3527) AUTHORS Ma H, Tu LC, Naseri A, Huisman M, Zhang S, Grunwald D, Pederson T TITLE Multiplexed labeling of genomic loci with dCas9 and engineered sgRNAs using CRISPRainbow. JOURNAL Nat Biotechnol. 2016 Apr 18. doi: 10.1038/nbt.3526. PUBMED 27088723 REFERENCE 2 (bases 1 to 3527) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..3527 /organism="synthetic DNA construct" /mol_type="other DNA" promoter 185..215 /label=lac UV5 promoter /note="E. coli lac promoter with an ""up"" mutation" CDS 269..928 /codon_start=1 /gene="cat" /product="chloramphenicol acetyltransferase" /label=CmR /note="confers resistance to chloramphenicol" /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA" primer_bind complement(335..354) /label=CAT-R /note="Chloramphenicol resistance gene, reverse primer" CDS 1270..1575 /codon_start=1 /gene="ccdB" /product="CcdB, a bacterial toxin that poisons DNA gyrase" /label=ccdB /note="Plasmids containing the ccdB gene cannot be propagated in standard E. coli strains." /translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI" primer_bind 1454..1473 /label=ccdB-fwd /note="ccdB gene, forward primer" rep_origin complement(1688..2276) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(1768..1787) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(2447..3307) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 3070..3089 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(3308..3412) /gene="bla" /label=AmpR promoter primer_bind complement(3487..3506) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" ORIGIN 1 tccctgcttg tgtgttggag gtcgctgagt agtgcgcgag caaaatttaa gctacaacaa 61 ggcaaggctt gaccgacaat tccatgaaga atctgcttag ggttaggcgt tttgcgctgc 121 ttcgcgatgt acgggccaga tatacgcgtt gacagagacc gcggccgcat taggcacccc 181 aggctttaca ctttatgctt ccggctcgta taatgtgtgg attttgagtt aggatccgtc 241 gagattttca ggagctaagg aagctaaaat ggagaaaaaa atcactggat ataccaccgt 301 tgatatatcc caatggcatc gtaaagaaca ttttgaggca tttcagtcag ttgctcaatg 361 tacctataac cagaccgttc agctggatat tacggccttt ttaaagaccg taaagaaaaa 421 taagcacaag ttttatccgg cctttattca cattcttgcc cgcctgatga atgctcatcc 481 ggaattccgt atggcaatga aagacggtga gctggtgata tgggatagtg ttcacccttg 541 ttacaccgtt ttccatgagc aaactgaaac gttttcatcg ctctggagtg aataccacga 601 cgatttccgg cagtttctac acatatattc gcaagatgtg gcgtgttacg gtgaaaacct 661 ggcctatttc cctaaagggt ttattgagaa tatgtttttc gtctcagcca atccctgggt 721 gagtttcacc agttttgatt taaacgtggc caatatggac aacttcttcg cccccgtttt 781 caccatgggc aaatattata cgcaaggcga caaggtgctg atgccgctgg cgattcaggt 841 tcatcatgcc gtttgtgatg gcttccatgt cggcagaatg cttaatgaat tacaacagta 901 ctgcgatgag tggcagggcg gggcgtaaag atctggatcc ggcttactaa aagccagata 961 acagtatgcg tatttgcgcg ctgatttttg cggtataaga atatatactg atatgtatac 1021 ccgaagtatg tcaaaaagag gtatgctatg aagcagcgta ttacagtgac agttgacagc 1081 gacagctatc agttgctcaa ggcatatatg atgtcaatat ctccggtctg gtaagcacaa 1141 ccatgcagaa tgaagcccgt cgtctgcgtg ccgaacgctg gaaagcggaa aatcaggaag 1201 ggatggctga ggtcgcccgg tttattgaaa tgaacggctc ttttgctgac gagaacaggg 1261 gctggtgaaa tgcagtttaa ggtttacacc tataaaagag agagccgtta tcgtctgttt 1321 gtggatgtac agagtgatat tattgacacg cccgggcgac ggatggtgat ccccctggcc 1381 agtgcacgtc tgctgtcaga taaagtctcc cgtgaacttt acccggtggt gcatatcggg 1441 gatgaaagct ggcgcatgat gaccaccgat atggccagtg tgccggtctc cgttatcggg 1501 gaagaagtgg ctgatctcag ccaccgcgaa aatgacatca aaaacgccat taacctgatg 1561 ttctggggaa tataaatgtc aggctccctt atacacagcc agtctgcagg tcgacggtct 1621 cgactcacat gtgagcaaaa ggccagcaaa aggccaggaa ccgtaaaaag gccgcgttgc 1681 tggcgttttt ccataggctc cgcccccctg acgagcatca caaaaatcga cgctcaagtc 1741 agaggtggcg aaacccgaca ggactataaa gataccaggc gtttccccct ggaagctccc 1801 tcgtgcgctc tcctgttccg accctgccgc ttaccggata cctgtccgcc tttctccctt 1861 cgggaagcgt ggcgctttct catagctcac gctgtaggta tctcagttcg gtgtaggtcg 1921 ttcgctccaa gctgggctgt gtgcacgaac cccccgttca gcccgaccgc tgcgccttat 1981 ccggtaacta tcgtcttgag tccaacccgg taagacacga cttatcgcca ctggcagcag 2041 ccactggtaa caggattagc agagcgaggt atgtaggcgg tgctacagag ttcttgaagt 2101 ggtggcctaa ctacggctac actagaagaa cagtatttgg tatctgcgct ctgctgaagc 2161 cagttacctt cggaaaaaga gttggtagct cttgatccgg caaacaaacc accgctggta 2221 gcggtggttt ttttgtttgc aagcagcaga ttacgcgcag aaaaaaagga tctcaagaag 2281 atcctttgat cttttctacg gggtctgacg ctcagtggaa cgaaaactca cgttaaggga 2341 ttttggtcat gagattatca aaaaggatct tcacctagat ccttttaaat taaaaatgaa 2401 gttttaaatc aatctaaagt atatatgagt aaacttggtc tgacagttac caatgcttaa 2461 tcagtgaggc acctatctca gcgatctgtc tatttcgttc atccatagtt gcctgactcc 2521 ccgtcgtgta gataactacg atacgggagg gcttaccatc tggccccagt gctgcaatga 2581 taccgcgaga accacgctca ccggctccag atttatcagc aataaaccag ccagccggaa 2641 gggccgagcg cagaagtggt cctgcaactt tatccgcctc catccagtct attaattgtt 2701 gccgggaagc tagagtaagt agttcgccag ttaatagttt gcgcaacgtt gttgccattg 2761 ctacaggcat cgtggtgtca cgctcgtcgt ttggtatggc ttcattcagc tccggttccc 2821 aacgatcaag gcgagttaca tgatccccca tgttgtgcaa aaaagcggtt agctccttcg 2881 gtcctccgat cgttgtcaga agtaagttgg ccgcagtgtt atcactcatg gttatggcag 2941 cactgcataa ttctcttact gtcatgccat ccgtaagatg cttttctgtg actggtgagt 3001 actcaaccaa gtcattctga gaatagtgta tgcggcgacc gagttgctct tgcccggcgt 3061 caatacggga taataccgcg ccacatagca gaactttaaa agtgctcatc attggaaaac 3121 gttcttcggg gcgaaaactc tcaaggatct taccgctgtt gagatccagt tcgatgtaac 3181 ccactcgtgc acccaactga tcttcagcat cttttacttt caccagcgtt tctgggtgag 3241 caaaaacagg aaggcaaaat gccgcaaaaa agggaataag ggcgacacgg aaatgttgaa 3301 tactcatact cttccttttt caatattatt gaagcattta tcagggttat tgtctcatga 3361 gcggatacat atttgaatgt atttagaaaa ataaacaaat aggggttccg cgcacatttc 3421 cccgaaaagt gccacctgac gtcgacggat cgggagatct cccgatcccc tatggtgcac 3481 tctcagtaca atctgctctg atgccgcata gttaagccag tatctgc //
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pCRISPRainbowDONOR1载体质粒应用举例
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