质粒名称: | pETconNK |
---|---|
出品公司: | 爱迪基因 |
目录编号: | 81169 |
存储实验室: | Timothy Whitehead |
载体骨架基本信息 |
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载体名称: | pETconNK |
载体抗性: | 卡那霉素 |
空载体大小: | 6137 bp |
载体修饰: | 从pETcon开始,将氨苄青霉素耐药基因与kanmycin进行交换,并将KanR基因的BbvCI切痕位点3′。缺口序列CCTCAGCAA位于编码链上。 |
载体类型: | 细菌表达,酵母表达 |
筛选标记: | TRP1 |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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启动子 | GAL1 |
标签/融合蛋白: | c-myc(主干上的c终端) |
克隆方法: | 限制性内切酶 |
5' 测序引物 | GGACAATAGCTCGACGATTGAAGGTAGATACCCATA |
3' 测序引物 | CAAGTCCTCTTCAGAAATAAGCTTTTGTTC |
文献引用方法 |
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材料和方法部分: | pETconNK was a gift from Timothy Whitehead (Addgene plasmid # 81169 ; http://n2t.net/addgene:81169 ; RRID:Addgene_81169) |
参考文献部分: | Trade-offs between enzyme fitness and solubility illuminated by deep mutational scanning. Klesmith JR, Bacik JP, Wrenbeck EE, Michalczyk R, Whitehead TA. Proc Natl Acad Sci U S A. 2017 Feb 14. pii: 201614437. doi: 10.1073/pnas.1614437114. 10.1073/pnas.1614437114 PubMed 28196882 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pETconNK 6137 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION pETconNK Empty Backbone. ACCESSION . VERSION . KEYWORDS pETconNK SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6137) AUTHORS Klesmith JR, Bacik JP, Wrenbeck EE, Michalczyk R, Whitehead TA TITLE Trade-offs between enzyme fitness and solubility illuminated by deep mutational scanning. JOURNAL Proc Natl Acad Sci U S A. 2017 Feb 14. pii: 201614437. doi: 10.1073/pnas.1614437114. PUBMED 28196882 REFERENCE 2 (bases 1 to 6137) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..6137 /organism="synthetic DNA construct" /mol_type="other DNA" protein_bind 2..18 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 7..29 /label=M13/pUC Reverse /note="In lacZ gene" primer_bind 26..42 /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind 26..42 /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" promoter 63..81 /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase" promoter 315..756 /gene="S. cerevisiae GAL1" /label=GAL1 promoter /note="inducible promoter, regulated by Gal4" protein_bind 315..432 /label=UAS /bound_moiety="Gal4" /note="upstream activating sequence mediating Gal4-dependent induction" primer_bind 727..750 /label=GAL1 /note="S. cerevisiae GAL1 promoter, forward primer" CDS 1082..1093 /codon_start=1 /product="Factor Xa recognition and cleavage site" /label=Factor Xa site /translation="IEGR" CDS 1094..1120 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /label=HA /translation="YPYDVPDYA" CDS 1236..1265 /codon_start=1 /product="Myc (human c-Myc proto-oncogene) epitope tag" /label=Myc /translation="EQKLISEEDL" primer_bind complement(1594..1613) /label=T7 /note="T7 promoter, forward primer" promoter complement(1595..1613) /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" primer_bind complement(1620..1637) /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind complement(1620..1636) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind complement(1629..1651) /label=M13/pUC Forward /note="In lacZ gene" rep_origin 1777..2232 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(1864..1883) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 2074..2095 /label=F1ori-F /note="F1 origin, forward primer" CDS complement(2335..3009) /codon_start=1 /gene="S. cerevisiae TRP1" /product="phosphoribosylanthranilate isomerase, required for tryptophan biosynthesis" /label=TRP1 /note="yeast auxotrophic marker" /translation="MSVINFTGSSGPLVKVCGLQSTEAAECALDSDADLLGIICVPNRK RTIDPVIARKISSLVKAYKNSSGTPKYLVGVFRNQPKEDVLALVNDYGIDIVQLHGDES WQEYQEFLGLPVIKRLVFPKDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDW VGRQESPESLHFMLAGGLTPENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNA KK" promoter complement(3010..3290) /gene="S. cerevisiae TRP1" /label=TRP1 promoter primer_bind complement(3311..3330) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" primer_bind 3430..3452 /label=pGEX 3' /note="pGEX vectors, reverse primer" primer_bind complement(3490..3508) /label=pBRforEco /note="pBR322 vectors, upsteam of EcoRI site, forward primer" misc_feature 3549..4052 /label=CEN/ARS /note="S. cerevisiae CEN6 centromere fused to an autonomously replicating sequence" promoter 4089..4193 /gene="bla" /label=AmpR promoter CDS 4194..5009 /codon_start=1 /gene="aph(3')-Ia" /product="aminoglycoside phosphotransferase" /label=KanR /note="confers resistance to kanamycin in bacteria or G418 (Geneticin(R)) in eukaryotes" /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF" primer_bind complement(4267..4286) /label=Kan-R /note="Kanamycin resistance gene, reverse primer" rep_origin 5189..5777 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 5678..5697 /label=pBR322ori-F /note="pBR322 origin, forward primer" primer_bind 5931..5948 /label=L4440 /note="L4440 vector, forward primer" protein_bind 6065..6086 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." promoter 6101..6131 /label=lac promoter /note="promoter for the E. coli lac operon" ORIGIN 1 attgtgagcg gataacaatt tcacacagga aacagctatg accatgatta cgccaagctc 61 gaaattaacc ctcactaaag ggaacaaaag ctggtaccaa ttccttgaat tttcaaaaat 121 tcttactttt tttttggatg gacgcaaaga agtttaataa tcatattaca tggcattacc 181 accatataca tatccatatc taatcttact tatatgttgt ggaaatgtaa agagccccat 241 tatcttagcc taaaaaaacc ttctctttgg aactttcagt aatacgctta actgctcatt 301 gctatattga agtacggatt agaagccgcc gagcgggtga cagccctccg aaggaagact 361 ctcctccgtg cgtcctcgtc ttcaccggtc gcgttcctga aacgcagatg tgcctcgcgc 421 cgcactgctc cgaacaataa agattctaca atactagctt ttatggttat gaagaggaaa 481 aattggcagt aacctggccc cacaaacctt caaatgaacg aatcaaatta acaaccatag 541 gatgataatg cgattagttt tttagcctta tttctggggt aattaatcag cgaagcgatg 601 atttttgatc tattaacaga tatataaatg caaaaactgc ataaccactt taactaatac 661 tttcaacatt ttcggtttgt attacttctt attcaaatgt aataaaagta tcaacaaaaa 721 attgttaata tacctctata ctttaacgtc aaggagaaaa aaccccggat cgaattccct 781 acttcataca ttttcaatta agatgcagtt acttcgctgt ttttcaatat tttctgttat 841 tgcttcagtt ttagcacagg aactgacaac tatatgcgag caaatcccct caccaacttt 901 agaatcgacg ccgtactctt tgtcaacgac tactattttg gccaacggga aggcaatgca 961 aggagttttt gaatattaca aatcagtaac gtttgtcagt aattgcggtt ctcacccctc 1021 aacaactagc aaaggcagcc ccataaacac acagtatgtt tttaaggaca atagctcgac 1081 gattgaaggt agatacccat acgacgttcc agactacgct ctgcaggcta gtggtggagg 1141 aggctctggt ggaggcggta gcggaggcgg agggtcggct agccatatgt gaagcatgct 1201 taattaaggc gccttatctc gaggggggcg gatccgaaca aaagcttatt tctgaagagg 1261 acttgtaata gagatctgat aacaacagtg tagatgtaac aaaatcgact ttgttcccac 1321 tgtactttta gctcgtacaa aatacaatat acttttcatt tctccgtaaa caacatgttt 1381 tcccatgtaa tatccttttc tatttttcgt tccgttacca actttacaca tactttatat 1441 agctattcac ttctatacac taaaaaacta agacaatttt aattttgctg cctgccatat 1501 ttcaatttgt tataaattcc tataatttat cctattagta gctaaaaaaa gatgaatgtg 1561 aatcgaatcc taagagaatt gagctccaat tcgccctata gtgagtcgta ttacaattca 1621 ctggccgtcg ttttacaacg tcgtgactgg gaaaaccctg gcgttaccca acttaatcgc 1681 cttgcagcac atcccccttt cgccagctgg cgtaatagcg aagaggcccg caccgatcgc 1741 ctttcccaac agttgcgcag cctgaatggc gaatggacgc gccctgtagc ggcgcattaa 1801 gcgcggcggg tgtggtggtt acgcgcagcg tgaccgctac acttgccagc gccctagcgc 1861 ccgctccttt cgctttcttc ccttcctttc tcgccacgtt cgccggcttt ccccgtcaag 1921 ctctaaatcg ggggctccct ttagggttcc gatttagtgc tttacggcac ctcgacccca 1981 aaaaacttga ttagggtgat ggttcacgta gtgggccatc gccctgatag acggtttttc 2041 gccctttgac gttggagtcc acgttcttta atagtggact cttgttccaa actggaacaa 2101 cactcaaccc tatctcggtc tattcttttg atttataagg gattttgccg atttcggcct 2161 attggttaaa aaatgagctg atttaacaaa aatttaacgc gaattttaac aaaatattaa 2221 cgcttacaat ttcctgatgc ggtattttct ccttacgcat ctgtgcggta tttcacaccg 2281 catagatcgg caagtgcaca aacaatactt aaataaatac tactcagtaa taacctattt 2341 cttagcattt ttgacgaaat ttgctatttt gttagagtct tttacaccat ttgtctccac 2401 acctccgctt acatcaacac caataacgcc atttaatcta agcgcatcac caacattttc 2461 tggcgtcagt ccaccagcta acataaaatg taagctttcg gggctctctt gccttccaac 2521 ccagtcagaa atcgagttcc aatccaaaag ttcacctgtc ccacctgctt ctgaatcaaa 2581 caagggaata aacgaatgag gtttctgtga agctgcactg agtagtatgt tgcagtcttt 2641 tggaaatacg agtcttttaa taactggcaa accgaggaac tcttggtatt cttgccacga 2701 ctcatctcca tgcagttgga cgatatcaat gccgtaatca ttgaccagag ccaaaacatc 2761 ctccttaggt tgattacgaa acacgccaac caagtatttc ggagtgcctg aactattttt 2821 atatgctttt acaagacttg aaattttcct tgcaataacc gggtcaattg ttctctttct 2881 attgggcaca catataatac ccagcaagtc agcatcggaa tctagagcac attctgcggc 2941 ctctgtgctc tgcaagccgc aaactttcac caatggacca gaactacctg tgaaattaat 3001 aacagacata ctccaagctg cctttgtgtg cttaatcacg tatactcacg tgctcaatag 3061 tcaccaatgc cctccctctt ggccctctcc ttttcttttt tcgaccgaat taattcttaa 3121 tcggcaaaaa aagaaaagct ccggatcaag attgtacgta aggtgacaag ctatttttca 3181 ataaagaata tcttccacta ctgccatctg gcgtcataac tgcaaagtac acatatatta 3241 cgatgctgtt ctattaaatg cttcctatat tatatatata gtaatgtcgt gatctatggt 3301 gcactctcag tacaatctgc tctgatgccg catagttaag ccagccccga cacccgccaa 3361 cacccgctga cgcgccctga cgggcttgtc tgctcccggc atccgcttac agacaagctg 3421 tgaccgtctc cgggagctgc atgtgtcaga ggttttcacc gtcatcaccg aaacgcgcga 3481 gacgaaaggg cctcgtgata cgcctatttt tataggttaa tgtcatgata ataatggttt 3541 cttagacgga tcgcttgcct gtaacttaca cgcgcctcgt atcttttaat gatggaataa 3601 tttgggaatt tactctgtgt ttatttattt ttatgttttg tatttggatt ttagaaagta 3661 aataaagaag gtagaagagt tacggaatga agaaaaaaaa ataaacaaag gtttaaaaaa 3721 tttcaacaaa aagcgtactt tacatatata tttattagac aagaaaagca gattaaatag 3781 atatacattc gattaacgat aagtaaaatg taaaatcaca ggattttcgt gtgtggtctt 3841 ctacacagac aagatgaaac aattcggcat taatacctga gagcaggaag agcaagataa 3901 aaggtagtat ttgttggcga tccccctaga gtcttttaca tcttcggaaa acaaaaacta 3961 ttttttcttt aatttctttt tttactttct atttttaatt tatatattta tattaaaaaa 4021 tttaaattat aattattttt atagcacgtg atgaaaagga cccaggtggc acttttcggg 4081 gaaatgtgcg cggaacccct atttgtttat ttttctaaat acattcaaat atgtatccgc 4141 tcatgagaca ataaccctga taaatgcttc aataatattg aaaaaggaag agtatgagcc 4201 atattcaacg ggaaacgtct tgctctaggc cgcgattaaa ttccaacatg gatgctgatt 4261 tatatgggta taaatgggct cgcgataatg tcgggcaatc aggtgcgaca atctatcgat 4321 tgtatgggaa gcccgatgcg ccagagttgt ttctgaaaca tggcaaaggt agcgttgcca 4381 atgatgttac agatgagatg gtcagactaa actggctgac ggaatttatg cctcttccga 4441 ccatcaagca ttttatccgt actcctgatg atgcatggtt actcaccact gcgatccccg 4501 ggaaaacagc attccaggta ttagaagaat atcctgattc aggtgaaaat attgttgatg 4561 cgctggcagt gttcctgcgc cggttgcatt cgattcctgt ttgtaattgt ccttttaaca 4621 gcgatcgcgt atttcgtctc gctcaggcgc aatcacgaat gaataacggt ttggttgatg 4681 cgagtgattt tgatgacgag cgtaatggct ggcctgttga acaagtctgg aaagaaatgc 4741 ataaactttt gccattctca ccggattcag tcgtcactca tggtgatttc tcacttgata 4801 accttatttt tgacgagggg aaattaatag gttgtattga tgttggacga gtcggaatcg 4861 cagaccgata ccaggatctt gccatcctat ggaactgcct cggtgagttt tctccttcat 4921 tacagaaacg gctttttcaa aaatatggta ttgataatcc tgatatgaat aaattgcagt 4981 ttcatttgat gctcgatgag tttttctaac ctcagcaact gtcagaccaa gtttactcat 5041 atatacttta gattgattta aaacttcatt tttaatttaa aaggatctag gtgaagatcc 5101 tttttgataa tctcatgacc aaaatccctt aacgtgagtt ttcgttccac tgagcgtcag 5161 accccgtaga aaagatcaaa ggatcttctt gagatccttt ttttctgcgc gtaatctgct 5221 gcttgcaaac aaaaaaacca ccgctaccag cggtggtttg tttgccggat caagagctac 5281 caactctttt tccgaaggta actggcttca gcagagcgca gataccaaat actgttcttc 5341 tagtgtagcc gtagttaggc caccacttca agaactctgt agcaccgcct acatacctcg 5401 ctctgctaat cctgttacca gtggctgctg ccagtggcga taagtcgtgt cttaccgggt 5461 tggactcaag acgatagtta ccggataagg cgcagcggtc gggctgaacg gggggttcgt 5521 gcacacagcc cagcttggag cgaacgacct acaccgaact gagataccta cagcgtgagc 5581 tatgagaaag cgccacgctt cccgaaggga gaaaggcgga caggtatccg gtaagcggca 5641 gggtcggaac aggagagcgc acgagggagc ttccaggggg aaacgcctgg tatctttata 5701 gtcctgtcgg gtttcgccac ctctgacttg agcgtcgatt tttgtgatgc tcgtcagggg 5761 ggcggagcct atggaaaaac gccagcaacg cggccttttt acggttcctg gccttttgct 5821 ggccttttgc tcacatgttc tttcctgcgt tatcccctga ttctgtggat aaccgtatta 5881 ccgcctttga gtgagctgat accgctcgcc gcagccgaac gaccgagcgc agcgagtcag 5941 tgagcgagga agcggaagag cgcccaatac gcaaaccgcc tctccccgcg cgttggccga 6001 ttcattaatg cagctggcac gacaggtttc ccgactggaa agcgggcagt gagcgcaacg 6061 caattaatgt gagttagctc actcattagg caccccaggc tttacacttt atgcttccgg 6121 ctcgtatgtt gtgtgga //
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