质粒名称: | pGC1::YC3.60 |
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出品公司: | Addgene |
目录编号: | 107061 |
存储实验室: | Julian Schroeder |
载体骨架基本信息 |
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载体名称: | pGreenII 0179 |
空载体大小: | 9069bp |
完整质粒大小: | 9085 bp |
载体类型: | 植物细胞表达 |
筛选标记: | Hygromycin |
载体抗性: | Kanamycin |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | 未知 |
插入基因信息 |
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插入基因名称: | YC3.6 / yellow cameleon 3.6 |
物种来源: | Synthetic |
插入大小: | 1962bp |
启动子: | GC1 (At1g22690) |
克隆方法: | 未知 |
5’测序引物 | gtaaaacgacggccagt |
3’测序引物 | gtcatagctgtttcctg |
文献引用方法 |
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材料和方法部分: |
pGC1::YC3.60 was a gift from Julian Schroeder (Addgene plasmid # 107061 ; http://n2t.net/addgene:107061 ; RRID:Addgene_107061)
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参考文献部分: | Isolation of a strong Arabidopsis guard cell promoter and its potential as a research tool. Yang Y, Costa A, Leonhardt N, Siegel RS, Schroeder JI. Plant Methods. 2008 Feb 19;4:6. doi: 10.1186/1746-4811-4-6. 10.1186/1746-4811-4-6 PubMed 18284694 |
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载体基本信息
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载体简介
载体序列
LOCUS pGC1::YC3.60 9085 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Expressing Ca sensor yellow cameloen 3.6 under guard cell specific promoter. ACCESSION . VERSION . KEYWORDS pGC1::YC3.60 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 9085) AUTHORS Yang Y, Costa A, Leonhardt N, Siegel RS, Schroeder JI TITLE Isolation of a strong Arabidopsis guard cell promoter and its potential as a research tool. JOURNAL Plant Methods. 2008 Feb 19;4:6. doi: 10.1186/1746-4811-4-6. PUBMED 18284694 REFERENCE 2 (bases 1 to 9085) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.biofeng.com FEATURES Location/Qualifiers source 1..9085 /organism="synthetic DNA construct" /mol_type="other DNA" CDS 2859..2936 /codon_start=1 /product="calmodulin-binding peptide" /label=CBP /note="derived from skeletal muscle myosin light chain kinase; binds calmodulin with nanomolar affinity in the presence of calcium" /translation="KRRWKKNFIAVSAANRFKKISSSGAL" CDS 2943..3677 /codon_start=1 /product="circularly permuted form of the Venus yellow fluorescent protein (Nagai et al., 2004)" /label=cp173Venus /note="efficient FRET acceptor for CFP" /translation="MDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRD HMVLLEFVTAAGITLGMDELYKGGSGGMVSKGEELFTGVVPILVELDGDVNGHKFSVSG EGEGDATYGKLTLKLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPE GYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHN VYITADKQKNGIKANFKIRHNIE" terminator 3701..3953 /label=NOS terminator /note="nopaline synthase terminator and poly(A) signal" primer_bind complement(3962..3978) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind complement(4026..4046) /label=T3 /note="T3 promoter, forward primer" promoter complement(4026..4044) /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase" primer_bind complement(4065..4081) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(4065..4081) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(4078..4100) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 4089..4105 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(4113..4143) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 4158..4179 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(4296..4313) /label=L4440 /note="L4440 vector, forward primer" misc_feature 4418..4442 /label=RB T-DNA repeat /note="right border repeat from nopaline C58 T-DNA" rep_origin complement(4533..5121) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(4613..4632) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(5292..6107) /codon_start=1 /gene="aph(3')-Ia" /product="aminoglycoside phosphotransferase" /label=KanR /note="confers resistance to kanamycin in bacteria or G418 (Geneticin(R)) in eukaryotes" /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF" primer_bind 6015..6034 /label=Kan-R /note="Kanamycin resistance gene, reverse primer" primer_bind 6099..6118 /label=pENTR-R /note="pENTR vectors, reverse primer" rep_origin 6398..6833 /label=pSa ori /note="origin of replication from bacterial plasmid pSa" misc_feature 6960..6982 /label=LB T-DNA repeat /note="left border repeat from nopaline C58 T-DNA (truncated)" polyA_signal 6990..7166 /label=CaMV poly(A) signal /note="cauliflower mosaic virus polyadenylation signal" CDS complement(7398..8423) /codon_start=1 /gene="aph(4)-Ia" /product="aminoglycoside phosphotransferase from E. coli" /label=HygR /note="confers resistance to hygromycin" /translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK E" promoter complement(8443..8788) /label=CaMV 35S promoter /note="strong constitutive promoter from cauliflower mosaic virus" primer_bind complement(8480..8500) /label=35S promoter /note="CaMV 35S promoter, forward primer" primer_bind 8991..9013 /label=M13/pUC Forward /note="In lacZ gene" primer_bind 9006..9022 /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind 9032..9051 /label=T7 /note="T7 promoter, forward primer" promoter 9032..9050 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" ORIGIN 1 gagtaaagat tcagtaaccc gatgctcctg ctcttcctca agaccttcct tgattcgccg 61 ccggtatgtt ctccgtctgt ggtagcgcct ttggaacact ctaccaacgc cgccatgaaa 121 ggatctctca tggccgcagg ggacgtgttc ttcttacatc tggtgttagg gctatggtta 181 ctccagtgag gagggagagg caagaggttg cttaatgatt cgtttttccg gtgatacgag 241 aactctttag gtttaccggg aagcttttcc catgaaaatg ggatgccaag tggatggaga 301 ggagttgccg gagagttgcc ggagaatagg agggaattgg aggaggagga agagagtgat 361 cgccgggttg aaatgttaac cgtcgaggag aatttgaccg agttggatcg tctagtaggt 421 acaattcggg tccttggcga agtatccatt caaaatagtg tttagttttg gacttgagaa 481 cttgttgtct ctttgatctc ttttatataa aactttggac gtgtaggaca aacttgtcaa 541 cataagaaac aaaatggttg caacagagag gatgaattta taagttttca acaccgcttt 601 tcttattaga cggacaacaa tctatagtgg agtaaatttt tatttttggt aaaatggtta 661 gtgaattcaa atatctaaat tttgtgactc actaacatta acaaatatgc ataagacata 721 aaaaaaagaa agaataattc ttatgaaaca agaaaaaaaa cctatacaat caatctttag 781 gaattgacga tgtagaattg tagatgataa attttctcaa atatagatgg gcctaatgaa 841 gggtgccgct tattggatct gacccatttt gaggacatta atattttcat tggttataag 901 ccttttaatc aaaattgtca ttaaattgat gtctccctct cgggtcattt tcctttctcc 961 ctcacaatta atgtagactt tagcaatttg cacgctgtgc tttgtcttta tatttagtaa 1021 cacaaacatt ttgacttgtc ttgtagagtt tttctctttt atttttctat ccaatatgaa 1081 aactaaaagt gttctcgtat acatatatta aaattaaaga aacctatgaa aacaccaata 1141 caaatgcgat attgttttca gttcgacgtt tcatgtttgt tagaaaattt ctaatgacgt 1201 ttgtataaaa tagacaatta aacgccaaac actacatctg tgttttcgaa caatattgcg 1261 tctgcgtttc cttcatctat ctctctcagt gtcacaatgt ctgaactaag agacagctgt 1321 aaactatcat taagacataa actaccaaag tatcaagcta atgtaaaaat tactctcatt 1381 tccacgtaac aaattgagtt agcttaagat attagtgaaa ctaggtttga attttcttct 1441 tcttcttcca tgcatcctcc gaaaaaaggg aaccaatcaa aactgtttgc atatcaaact 1501 ccaacacttt acagcaaatg caatctataa tctgtgattt atccaataaa aacctgtgat 1561 ttatgtttgg ctccagcgat gaaagtctat gcatgtgatc tctatccaac atgagtaatt 1621 gttcagaaaa taaaaagtag ctgaaatgta tctatataaa gaatcatcca caagtactat 1681 tttcacacac tacttcaaaa tcactactca agaaatccat ggtgagcaag ggcgaggagc 1741 tgttcaccgg ggtggtgccc atcctggtcg agctggacgg cgacgtaaac ggccacaggt 1801 tcagcgtgtc cggcgagggc gagggcgatg ccacctacgg caagctgacc ctgaagttca 1861 tctgcaccac cggcaagctg cccgtgccct ggcccaccct cgtgaccacc ctgacctggg 1921 gcgtgcagtg cttcagccgc taccccgacc acatgaagca gcacgacttc ttcaagtccg 1981 ccatgcccga aggctacgtc caggagcgta ccatcttctt caaggacgac ggcaactaca 2041 agacccgcgc cgaggtgaag ttcgagggcg acaccctggt gaaccgcatc gagctgaagg 2101 gcatcgactt caaggaggac ggcaacatcc tggggcacaa gctggagtac aactacatca 2161 gccacaacgt ctatatcacc gccgacaagc agaagaacgg catcaaggcc cacttcaaga 2221 tccgccacaa catcgaggac ggcagcgtgc agctcgccga ccactaccag cagaacaccc 2281 ccatcggcga cggccccgtg ctgctgcccg acaaccacta cctgagcacc cagtccgccc 2341 tgagcaaaga ccccaacgag aagcgcgatc acatggtcct gctggagttc gtgaccgccg 2401 cccgcatgca tgaccaactg acagaagagc agattgcaga gttcaaagaa gccttctcat 2461 tattcgacaa ggatggggac ggcaccatca ccacaaagga acttggcacc gttatgaggt 2521 cgcttggaca aaacccaacg gaagcagaat tgcaggatat gatcaatgaa gtcgatgctg 2581 atggcaatgg aacgatttac tttcctgaat ttcttactat gatggctaga aaaatgaagg 2641 acacagacag cgaagaggaa atccgagaag cattccgtgt ttttgacaag gatgggaacg 2701 gctacatcag cgctgctcag ttacgtcacg tcatgacaaa cctcggggag aagttaacag 2761 atgaagaagt tgatgaaatg ataagggaag cagatatcga tggtgatggc caagtaaact 2821 atgaagagtt tgtacaaatg atgacagcaa agggggggaa gaggcgctgg aagaaaaact 2881 tcattgccgt cagcgctgcc aaccggttca agaagatctc cagctccggg gcactggagc 2941 tcatggacgg cggcgtgcag ctcgccgacc actaccagca gaacaccccc atcggcgacg 3001 gccccgtgct gctgcccgac aaccactacc tgagctacca gtccgccctg agcaaagacc 3061 ccaacgagaa gcgcgatcac atggtcctgc tggagttcgt gaccgccgcc gggatcactc 3121 tcggcatgga cgagctgtac aagggtggca gcggtggcat ggtgagcaag ggcgaggagc 3181 tgttcaccgg ggtggtgccc atcctggtcg agctggacgg cgacgtaaac ggccacaagt 3241 tcagcgtgtc cggcgagggc gagggcgatg ccacctacgg caagctgacc ctgaagctga 3301 tctgcaccac cggcaagctg cccgtgccct ggcccaccct cgtgaccacc ctgggctacg 3361 gcctgcagtg cttcgcccgc taccccgacc acatgaagca gcacgacttc ttcaagtccg 3421 ccatgcccga aggctacgtc caggagcgca ccatcttctt caaggacgac ggcaactaca 3481 agacccgcgc cgaggtgaag ttcgagggcg acaccctggt gaaccgcatc gagctgaagg 3541 gcatcgactt caaggaggac ggcaacatcc tggggcacaa gctggagtac aactacaaca 3601 gccacaacgt ctatatcacc gccgacaagc agaagaacgg catcaaggcc aacttcaaga 3661 tccgccacaa catcgagtaa gaattcgatc gaatttcccc gatcgttcaa acatttggca 3721 ataaagtttc ttaagattga atcctgttgc cggtcttgcg atgattatca tataatttct 3781 gttgaattac gttaagcatg taataattaa catgtaatgc atgacgttat ttatgagatg 3841 ggtttttatg attagagtcc cgcaattata catttaatac gcgatagaaa acaaaatata 3901 gcgcgcaaac taggataaat tatcgcgcgc ggtgtcatct atgttactag atcgggaatt 3961 cactggccgt cgttttacaa cgtcgtgacg cggccgccac cgcggtggag ctccagcttt 4021 tgttcccttt agtgagggtt aattgcgcgc ttggcgtaat catggtcata gctgtttcct 4081 gtgtgaaatt gttatccgct cacaattcca cacaacatac gagccggaag cataaagtgt 4141 aaagcctggg gtgcctaatg agtgagctaa ctcacattaa ttgcgttgcg ctcactgccc 4201 gctttccagt cgggaaacct gtcgtgccag ctgcattaat gaatcggcca acgcgcgggg 4261 agaggcggtt tgcgtattgg gcgctcttcc gcttcctcgc tcactgactc gctgcgctcg 4321 gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg cggtaatacg gttatccaca 4381 gaatcagggg ataacgcagg aaagaacatg aaggccttga caggatatat tggcgggtaa 4441 actaagtcgc tgtatgtgtt tgtttgagat ctcatgtgag caaaaggcca gcaaaaggcc 4501 aggaaccgta aaaaggccgc gttgctggcg tttttccata ggctccgccc ccctgacgag 4561 catcacaaaa atcgacgctc aagtcagagg tggcgaaacc cgacaggact ataaagatac 4621 caggcgtttc cccctggaag ctccctcgtg cgctctcctg ttccgaccct gccgcttacc 4681 ggatacctgt ccgcctttct cccttcggga agcgtggcgc tttctcatag ctcacgctgt 4741 aggtatctca gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc 4801 gttcagcccg accgctgcgc cttatccggt aactatcgtc ttgagtccaa cccggtaaga 4861 cacgacttat cgccactggc agcagccact ggtaacagga ttagcagagc gaggtatgta 4921 ggcggtgcta cagagttctt gaagtggtgg cctaactacg gctacactag aagaacagta 4981 tttggtatct gcgctctgct gaagccagtt accttcggaa gaagagttgg tagctcttga 5041 tccggcaaac aaaccaccgc tggtagcggt ggtttttttg tttgcaagca gcagattacg 5101 cgcagaaaaa aaggatctca agaagatcct ttgatctttt ctacggggtc tgacgctcag 5161 tggaacgaaa actcacgtta agggattttg gtcatgagat tatcaaaaag gatcttcacc 5221 tagatccttt taaattaaaa atgaagtttt aaatcaatct aaagtatata tgtgtaacat 5281 tggtctagtg attagaaaaa ctcatcgagc atcaaatgaa actgcaattt attcatatca 5341 ggattatcaa taccatattt ttgaaaaagc cgtttctgta atgaaggaga aaactcaccg 5401 aggcagttcc ataggatggc aagatcctgg tatcggtctg cgattccgac tcgtccaaca 5461 tcaatacaac ctattaattt cccctcgtca aaaataaggt tatcaagtga gaaatcacca 5521 tgagtgacga ctgaatccgg tgagaatggc aaaagtttat gcatttcttt ccagacttgt 5581 tcaacaggcc agccattacg ctcgtcatca aaatcactcg catcaaccaa accgttattc 5641 attcgtgatt gcgcctgagc gagacgaaat acgcgatcgc tgttaaaagg acaattacaa 5701 acaggaatcg aatgcaaccg gcgcaggaac actgccagcg catcaacaat attttcacct 5761 gaatcaggat attcttctaa tacctggaat gctgttttcc ctgggatcgc agtggtgagt 5821 aaccatgcat catcaggagt acggataaaa tgcttgatgg tcggaagagg cataaattcc 5881 gtcagccagt ttagtctgac catctcatct gtaacatcat tggcaacgct acctttgcca 5941 tgtttcagaa acaactctgg cgcatcgggc ttcccataca atcggtagat tgtcgcacct 6001 gattgcccga cattatcgcg agcccattta tacccatata aatcagcatc catgttggaa 6061 tttaatcgcg gccttgagca agacgtttcc cgttgaatat ggctcataac accccttgta 6121 ttactgttta tgtaagcaga cagttttatt gttcatgatg atatattttt atcttgtgca 6181 atgtaacatc agagattttg agacacaacg tggctttgtt gaataaatcg aacttttgct 6241 gagttgaagg atcagatcac gcatcttccc gacaacgcag accgttccgt ggcaaagcaa 6301 aagttcaaaa tcaccaactg gtccacctac aacaaagctc tcatcaaccg tggctccctc 6361 actttctggc tggatgatgg ggcgattcag gcgatcccca tccaacagcc cgccgtcgag 6421 cgggcttttt tatccccgga agcctgtgga tagagggtag ttatccacgt gaaaccgcta 6481 atgccccgca aagccttgat tcacggggct ttccggcccg ctccaaaaac tatccacgtg 6541 aaatcgctaa tcagggtacg tgaaatcgct aatcggagta cgtgaaatcg ctaataaggt 6601 cacgtgaaat cgctaatcaa aaaggcacgt gagaacgcta atagcccttt cagatcaaca 6661 gcttgcaaac acccctcgct ccggcaagta gttacagcaa gtagtatgtt caattagctt 6721 ttcaattatg aatatatata tcaattattg gtcgcccttg gcttgtggac aatgcgctac 6781 gcgcaccggc tccgcccgtg gacaaccgca agcggttgcc caccgtcgag cgcctttgcc 6841 cacaacccgg cggccggccg caacagatcg ttttataaat tttttttttt gaaaaagaaa 6901 aagcccgaaa ggcggcaacc tctcgggctt ctggatttcc gatccccgga attagatctt 6961 ggcaggatat attgtggtgt aacgttatcg atctggattt tagtactgga ttttggtttt 7021 aggaattaga aattttattg atagaagtat tttacaaata caaatacata ctaagggttt 7081 cttatatgct caacacatga gcgaaaccct ataagaaccc taatttccct tatcgggaaa 7141 ctactcacac attatttatg gagaaaatag agagagatag atttgtagag agagactggt 7201 gatttcagcg taccgaatta attcctgaat cactgcgacc ggccctcccg cgacccagcc 7261 gagcgagctt agcgaactgt ggacgagaac tgtgccacca agcgtaaggc cgttctctcg 7321 catttgcctt gctaggctcg cgcgagttgc tggctgaggc gttctcgaaa tcagctcttg 7381 ttcggtcggc atctactcta ttcctttgcc ctcggacgag tgctggggcg tcggtttcca 7441 ctatcggcga gtacttctac acagccatcg gtccagacgg ccgcgcttct gcgggcgatt 7501 tgtgtacgcc cgacagtccc ggctccggat cggacgattg cgtcgcatcg accctgcgcc 7561 caagctgcat catcgaaatt gccgtcaacc aagctctgat agagttggtc aagaccaatg 7621 cggagcatat acgcccggag ccttggcgat cctgcaagct ccggatgcct ccgctcgaag 7681 tagcgcgtct gctgctccat acaagccaac cacggcctcc agaagaagat gttggcgacc 7741 tcgtattggg aatccccgaa catcgcctcg ctccagtcaa tgaccgctgt tatgcggcca 7801 ttgtccgtca ggacattgtt ggagccgaaa tccgcgtgca cgaggtgccg gacttcgggg 7861 cagtcctcgg cccaaagcat cagctcatcg agagcctgcg cgacggacgc actgacggtg 7921 tcgtccatca cagtttgcca gtgatacaca tggggatcag caatcgcgca tatgaaatca 7981 cgccatgtag tgtattgacc gattccttgc ggtccgaatg ggccgaaccc gctcgtctgg 8041 ctaagatcgg ccgcagcgat agcatccata gcctccgcga ccggctgaag aacagcgggc 8101 agttcggttt caggcaggtc ttgcaacgtg acaccctgtg cacggcggga gatgcaatag 8161 gtcaggctct cgctgaactc cccaatgtca agcacttccg gaatcgggag cgcggccgat 8221 gcaaagtgcc gataaacata acgatctttg tagaaaccat cggcgcagct atttacccgc 8281 aggacatatc cacgccctcc tacatcgaag ctgaaagcac gagattcttc gccctccgag 8341 agctgcatca ggtcggagac gctgtcgaac ttttcgatca gaaacttctc gacagacgtc 8401 gcggtgagtt caggcttttt catagggggg atcagcttgg gctgtcctct ccaaatgaaa 8461 tgaacttcct tatatagagg aagggtcttg cgaaggatag tgggattgtg cgtcatccct 8521 tacgtcagtg gagatgtcac atcaatccac ttgctttgaa gacgtggttg gaacgtcttc 8581 tttttccacg atgctcctcg tgggtggggg tccatctttg ggaccactgt cggcagaggc 8641 atcttgaatg atagcctttc ctttatcgca atgatggcat ttgtaggagc caccttcctt 8701 ttctactgtc ctttcgatga agtgacagat agctgggcaa tggaatccga ggaggtttcc 8761 cgaaattacc ctttgttgaa aagtctcaat agccctttgg tcttctgaga ctgtatcttt 8821 gacatttttg gagtaggggt acgataacat taacgcttac aatttccatt cgccattcag 8881 gctgcgcaac tgttgggaag ggcgatcggt gcgggcctct tcgctattac gccagctggc 8941 gaaaggggga tgtgctgcaa ggcgattaag ttgggtaacg ccagggtttt cccagtcacg 9001 acgttgtaaa acgacggcca gtgagcgcgc gtaatacgac tcactatagg gcgaattggg 9061 taccgggccc cccctcgagg tcgac //