质粒名称: | YPet-N1 |
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出品公司: | Addgene |
目录编号: | 54637 |
存储实验室: | Patrick Daugherty, Michael Davidson |
载体骨架基本信息 |
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载体名称: | YPet-N1 |
空载体大小: | 4750 bp |
完整质粒大小: | 4733 bp |
载体类型: | 哺乳细胞表达 |
筛选标记: | 新霉素(G418) |
载体抗性: | 氨苄霉素 |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | 高拷贝 |
插入基因信息 |
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插入基因名称: | NO |
标签/融合蛋白: | YPet (C terminal on backbone) |
文献引用方法 |
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材料和方法部分: | YPet-N1 was a gift from Patrick Daugherty & Michael Davidson (Addgene plasmid # 54637 ; http://n2t.net/addgene:54637 ; RRID:Addgene_54637) |
参考文献部分: | Evolutionary optimization of fluorescent proteins for intracellular FRET. Nguyen AW, Daugherty PS. Nat Biotechnol. 2005 Mar . 23(3):355-60. 10.1038/nbt1066 PubMed 15696158 |
买家导航
载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS YPet-N1 4733 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Localization: N1 Cloning Vector, Excitation: 513, Emission: 527. ACCESSION . VERSION . KEYWORDS YPet-N1 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 4733) AUTHORS Nguyen AW, Daugherty PS TITLE Evolutionary optimization of fluorescent proteins for intracellular FRET. JOURNAL Nat Biotechnol. 2005 Mar . 23(3):355-60. PUBMED 15696158 REFERENCE 2 (bases 1 to 4733) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.biofeng.com FEATURES Location/Qualifiers source 1..4733 /organism="synthetic DNA construct" /mol_type="other DNA" enhancer 68..371 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 372..575 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 526..546 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" misc_feature 598..678 /label=MCS /note="multiple cloning site" regulatory 680..689 /regulatory_class="other" /note="vertebrate consensus sequence for strong initiation of translation (Kozak, 1987)" CDS 686..1405 /codon_start=1 /product="yellow fluorescent protein optimized for FRET with CyPet (Nguyen and Daugherty, 2005)" /label=YPet /note="mammalian codon-optimized" /translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL KLLCTTGKLPVPWPTLVTTLGYGVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDD GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIK ANFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALFKDPNEKRDHMVLL EFLTAAGITEGMNELYK" primer_bind complement(992..1011) /label=EXFP-R /note="For distinguishing EGFP variants, reverse primer" polyA_signal 1528..1649 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(1565..1584) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 1619..1638 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" rep_origin complement(1656..2111) /direction=LEFT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(1793..1814) /label=F1ori-F /note="F1 origin, forward primer" primer_bind 2005..2024 /label=F1ori-R /note="F1 origin, reverse primer" promoter 2138..2242 /gene="bla" /label=AmpR promoter promoter 2244..2601 /label=SV40 promoter /note="SV40 enhancer and early promoter" primer_bind complement(2267..2287) /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" rep_origin 2452..2587 /label=SV40 ori /note="SV40 origin of replication" primer_bind 2514..2533 /label=SV40pro-F /note="SV40 promoter/origin, forward primer" CDS 2636..3430 /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(2690..2709) /label=Neo-R /note="Neomycin resistance gene, reverse primer" primer_bind 3300..3319 /label=Neo-F /note="Neomycin resistance gene, forward primer" primer_bind complement(3618..3637) /label=TK-pA-R /note="Thymidine kinase polyA, reverse primer" polyA_signal 3662..3709 /label=HSV TK poly(A) signal /note="herpes simplex virus thymidine kinase polyadenylation signal (Cole and Stacy, 1985)" rep_origin 4038..4626 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 4527..4546 /label=pBR322ori-F /note="pBR322 origin, forward primer" ORIGIN 1 catgcattag ttattaatag taatcaatta cggggtcatt agttcatagc ccatatatgg 61 agttccgcgt tacataactt acggtaaatg gcccgcctgg ctgaccgccc aacgaccccc 121 gcccattgac gtcaataatg acgtatgttc ccatagtaac gccaataggg actttccatt 181 gacgtcaatg ggtggagtat ttacggtaaa ctgcccactt ggcagtacat caagtgtatc 241 atatgccaag tacgccccct attgacgtca atgacggtaa atggcccgcc tggcattatg 301 cccagtacat gaccttatgg gactttccta cttggcagta catctacgta ttagtcatcg 361 ctattaccat ggtgatgcgg ttttggcagt acatcaatgg gcgtggatag cggtttgact 421 cacggggatt tccaagtctc caccccattg acgtcaatgg gagtttgttt tggcaccaaa 481 atcaacggga ctttccaaaa tgtcgtaaca actccgcccc attgacgcaa atgggcggta 541 ggcgtgtacg gtgggaggtc tatataagca gagctggttt agtgaaccgt cagatccgct 601 agcgctaccg gactcagatc tcgagctcaa gcttcgaatt ctgcagtcga cggtaccgcg 661 ggcccgggat ccaccggtcg ccaccatggt gagcaaaggc gaagagctgt tcaccggcgt 721 ggtgcccatc ctggtggagc tggacggcga cgtgaacggc cacaagttca gcgtgagcgg 781 cgagggcgag ggcgacgcca cctacggcaa gctgaccctg aagctgctgt gcaccaccgg 841 caagctgccc gtgccctggc ccaccctggt gaccaccctg ggctacggcg tgcagtgctt 901 cgcccggtac cccgaccaca tgaagcagca cgacttcttc aagagcgcca tgcccgaggg 961 ctacgtgcag gagcggacca tcttcttcaa ggacgacggc aactacaaga cccgggccga 1021 ggtgaagttc gagggcgaca ccctggtgaa ccggatcgag ctgaagggca tcgacttcaa 1081 ggaggacggc aacatcctgg gccacaagct ggagtacaac tacaacagcc acaacgtgta 1141 catcaccgcc gacaagcaga agaacggcat caaggccaac ttcaagatcc ggcacaacat 1201 cgaggacggc ggcgtgcagc tggccgacca ctaccagcag aacaccccca tcggcgacgg 1261 ccccgtgctg ctgcccgaca accactacct gagctaccag agcgccctgt tcaaggaccc 1321 caacgagaag cgggaccaca tggtgctgct ggagttcctg accgccgccg gcatcaccga 1381 gggcatgaac gagctctata agtaaagcgg ccgcgactct agatcataat cagccatacc 1441 acatttgtag aggttttact tgctttaaaa aacctcccac acctccccct gaacctgaaa 1501 cataaaatga atgcaattgt tgttgttaac ttgtttattg cagcttataa tggttacaaa 1561 taaagcaata gcatcacaaa tttcacaaat aaagcatttt tttcactgca ttctagttgt 1621 ggtttgtcca aactcatcaa tgtatcttaa ggcgtaaatt gtaagcgtta atattttgtt 1681 aaaattcgcg ttaaattttt gttaaatcag ctcatttttt aaccaatagg ccgaaatcgg 1741 caaaatccct tataaatcaa aagaatagac cgagataggg ttgagtgttg ttccagtttg 1801 gaacaagagt ccactattaa agaacgtgga ctccaacgtc aaagggcgaa aaaccgtcta 1861 tcagggcgat ggcccactac gtgaaccatc accctaatca agttttttgg ggtcgaggtg 1921 ccgtaaagca ctaaatcgga accctaaagg gagcccccga tttagagctt gacggggaaa 1981 gccggcgaac gtggcgagaa aggaagggaa gaaagcgaaa ggagcgggcg ctagggcgct 2041 ggcaagtgta gcggtcacgc tgcgcgtaac caccacaccc gccgcgctta atgcgccgct 2101 acagggcgcg tcaggtggca cttttcgggg aaatgtgcgc ggaaccccta tttgtttatt 2161 tttctaaata cattcaaata tgtatccgct catgagacaa taaccctgat aaatgcttca 2221 ataatattga aaaaggaaga gtcctgaggc ggaaagaacc agctgtggaa tgtgtgtcag 2281 ttagggtgtg gaaagtcccc aggctcccca gcaggcagaa gtatgcaaag catgcatctc 2341 aattagtcag caaccaggtg tggaaagtcc ccaggctccc cagcaggcag aagtatgcaa 2401 agcatgcatc tcaattagtc agcaaccata gtcccgcccc taactccgcc catcccgccc 2461 ctaactccgc ccagttccgc ccattctccg ccccatggct gactaatttt ttttatttat 2521 gcagaggccg aggccgcctc ggcctctgag ctattccaga agtagtgagg aggctttttt 2581 ggaggcctag gcttttgcaa agatcgatca agagacagga tgaggatcgt ttcgcatgat 2641 tgaacaagat ggattgcacg caggttctcc ggccgcttgg gtggagaggc tattcggcta 2701 tgactgggca caacagacaa tcggctgctc tgatgccgcc gtgttccggc tgtcagcgca 2761 ggggcgcccg gttctttttg tcaagaccga cctgtccggt gccctgaatg aactgcaaga 2821 cgaggcagcg cggctatcgt ggctggccac gacgggcgtt ccttgcgcag ctgtgctcga 2881 cgttgtcact gaagcgggaa gggactggct gctattgggc gaagtgccgg ggcaggatct 2941 cctgtcatct caccttgctc ctgccgagaa agtatccatc atggctgatg caatgcggcg 3001 gctgcatacg cttgatccgg ctacctgccc attcgaccac caagcgaaac atcgcatcga 3061 gcgagcacgt actcggatgg aagccggtct tgtcgatcag gatgatctgg acgaagagca 3121 tcaggggctc gcgccagccg aactgttcgc caggctcaag gcgagcatgc ccgacggcga 3181 ggatctcgtc gtgacccatg gcgatgcctg cttgccgaat atcatggtgg aaaatggccg 3241 cttttctgga ttcatcgact gtggccggct gggtgtggcg gaccgctatc aggacatagc 3301 gttggctacc cgtgatattg ctgaagagct tggcggcgaa tgggctgacc gcttcctcgt 3361 gctttacggt atcgccgctc ccgattcgca gcgcatcgcc ttctatcgcc ttcttgacga 3421 gttcttctga gcgggactct ggggttcgaa atgaccgacc aagcgacgcc caacctgcca 3481 tcacgagatt tcgattccac cgccgccttc tatgaaaggt tgggcttcgg aatcgttttc 3541 cgggacgccg gctggatgat cctccagcgc ggggatctca tgctggagtt cttcgcccac 3601 cctaggggga ggctaactga aacacggaag gagacaatac cggaaggaac ccgcgctatg 3661 acggcaataa aaagacagaa taaaacgcac ggtgttgggt cgtttgttca taaacgcggg 3721 gttcggtccc agggctggca ctctgtcgat accccaccga gaccccattg gggccaatac 3781 gcccgcgttt cttccttttc cccaccccac cccccaagtt cgggtgaagg cccagggctc 3841 gcagccaacg tcggggcggc aggccctgcc atagcctcag gttactcata tatactttag 3901 attgatttaa aacttcattt ttaatttaaa aggatctagg tgaagatcct ttttgataat 3961 ctcatgacca aaatccctta acgtgagttt tcgttccact gagcgtcaga ccccgtagaa 4021 aagatcaaag gatcttcttg agatcctttt tttctgcgcg taatctgctg cttgcaaaca 4081 aaaaaaccac cgctaccagc ggtggtttgt ttgccggatc aagagctacc aactcttttt 4141 ccgaaggtaa ctggcttcag cagagcgcag ataccaaata ctgttcttct agtgtagccg 4201 tagttaggcc accacttcaa gaactctgta gcaccgccta catacctcgc tctgctaatc 4261 ctgttaccag tggctgctgc cagtggcgat aagtcgtgtc ttaccgggtt ggactcaaga 4321 cgatagttac cggataaggc gcagcggtcg ggctgaacgg ggggttcgtg cacacagccc 4381 agcttggagc gaacgaccta caccgaactg agatacctac agcgtgagct atgagaaagc 4441 gccacgcttc ccgaagggag aaaggcggac aggtatccgg taagcggcag ggtcggaaca 4501 ggagagcgca cgagggagct tccaggggga aacgcctggt atctttatag tcctgtcggg 4561 tttcgccacc tctgacttga gcgtcgattt ttgtgatgct cgtcaggggg gcggagccta 4621 tggaaaaacg ccagcaacgc ggccttttta cggttcctgg ccttttgctg gccttttgct 4681 cacatgttct ttcctgcgtt atcccctgat tctgtggata accgtattac cgc //