质粒名称: | AAV-P(Per2)-DIO-intron2-dLUC |
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出品公司: | 爱迪基因 |
目录编号: | 110059 |
存储实验室: | Eric Erquan Zhang |
载体骨架基本信息 |
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载体名称: | aav2 |
载体出品公司: | -- |
载体抗性: | 氨苄青霉素 |
空载体大小: | 4171 bp |
完整质粒大小: | 7928 bp |
载体修饰: | -- |
载体类型: | 哺乳动物表达,AAV,Cre/Lox |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | Per2 promoter and luciferase,Per2 intron2 |
物种来源: | M. musculus (mouse) |
插入大小: | -- |
基因突变: | -- |
GenBank编号 | -- |
启动子 | Per2 |
标签/融合蛋白: | -- |
克隆方法: | Gibson克隆 |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | -- |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | AAV-P(Per2)-DIO-intron2-dLUC was a gift from Eric Erquan Zhang (Addgene plasmid # 110059 ; http://n2t.net/addgene:110059 ; RRID:Addgene_110059) |
参考文献部分: | Long-term in vivo recording of circadian rhythms in brains of freely moving mice. Mei L, Fan Y, Lv X, Welsh DK, Zhan C, Zhang EE. Proc Natl Acad Sci U S A. 2018 Apr 2. pii: 1717735115. doi: 10.1073/pnas.1717735115. 10.1073/pnas.1717735115 PubMed 29610316 |
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载体基本信息
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载体序列
LOCUS AAV-P(Per2)-DIO-intron2-dLUC 7917 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Per2 transcription luciferase reporter. ACCESSION . VERSION . KEYWORDS AAV-P(Per2)-DIO-intron2-dLUC SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7917) AUTHORS Mei L, Fan Y, Lv X, Welsh DK, Zhan C, Zhang EE TITLE Long-term in vivo recording of circadian rhythms in brains of freely moving mice. JOURNAL Proc Natl Acad Sci U S A. 2018 Apr 2. pii: 1717735115. doi: 10.1073/pnas.1717735115. PUBMED 29610316 REFERENCE 2 (bases 1 to 7917) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..7917 /organism="synthetic DNA construct" /mol_type="other DNA" repeat_region 1..130 /label=AAV2 ITR (alternate) /note="Functional equivalent of wild-type AAV2 ITR" protein_bind 689..722 /label=lox2272 /bound_moiety="Cre recombinase" /note="Cre-mediated recombination occurs in the 8-bp core sequence (GGATACTT). lox2272 sites are compatible with each other, but incompatible with loxP or loxN sites (Lee and Saito, 1988)." protein_bind 773..806 /label=loxP /bound_moiety="Cre recombinase" /note="Cre-mediated recombination occurs in the 8-bp core sequence (GCATACAT)." CDS complement(812..931) /codon_start=1 /product="PEST degradation sequence from mouse ornithine decarboxylase" /label=hPEST /note="human codon-optimized" /translation="SHGFPPEVEEQAAGTLPMSCAQESGMDRHPAACASARINV" CDS complement(935..982) /codon_start=1 /product="non-ORF yeast peptide conferring ubiquitin-dependent degradation" /label=hCL1 /note="human codon-optimized" /translation="ACKNWFSSLSHFVIHL" CDS complement(989..2635) /codon_start=1 /product="firefly luciferase" /label=luciferase /note="synthetic luc2 version of the luciferase gene" /translation="EDAKNIKKGPAPFYPLEDGTAGEQLHKAMKRYALVPGTIAFTDAH IEVDITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPA NDIYNERELLNSMGISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSM YTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHAR DPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKI QSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYG LTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSG YVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILL QHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVF VDEVPKGLTGKLDARKIREILIKAKKGGKIAV" CDS complement(2645..2665) /codon_start=1 /product="tobacco etch virus (TEV) protease recognition and cleavage site" /label=TEV site /translation="ENLYFQG" CDS complement(2690..2734) /codon_start=1 /product="peptide tag that allows for enzymatic biotinylation" /label=AviTag(TM) /translation="GLNDIFEAQKIEWHE" CDS complement(2756..2821) /codon_start=1 /product="three tandem FLAG(R) epitope tags, followed by an enterokinase cleavage site" /label=3xFLAG /translation="DYKDHDGDYKDHDIDYKDDDDK" CDS complement(3548..3571) /codon_start=1 /product="FLAG(R) epitope tag, followed by an enterokinase cleavage site" /label=FLAG /translation="DYKDDDDK" regulatory 3571..3580 /regulatory_class="other" /note="vertebrate consensus sequence for strong initiation of translation (Kozak, 1987)" promoter complement(3618..3636) /label=SP6 promoter /note="promoter for bacteriophage SP6 RNA polymerase" primer_bind complement(3619..3636) /label=SP6 /note="SP6 promoter, forward primer" promoter complement(3642..3660) /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" primer_bind complement(3703..3722) /label=pMT2-F /note="Synthetic intron, forward primer" intron 3705..3837 /label=chimeric intron /note="chimera between introns from human beta-globin and immunoglobulin heavy chain genes" protein_bind complement(3902..3935) /label=lox2272 /bound_moiety="Cre recombinase" /note="Cre-mediated recombination occurs in the 8-bp core sequence (GGATACTT). lox2272 sites are compatible with each other, but incompatible with loxP or loxN sites (Lee and Saito, 1988)." protein_bind complement(3986..4019) /label=loxP /bound_moiety="Cre recombinase" /note="Cre-mediated recombination occurs in the 8-bp core sequence (GCATACAT)." misc_feature 4044..4632 /label=WPRE /note="woodchuck hepatitis virus posttranscriptional regulatory element" primer_bind complement(4097..4117) /label=WPRE-R /note="WPRE, reverse primer" CDS complement(4515..4526) /codon_start=1 /product="Factor Xa recognition and cleavage site" /label=Factor Xa site /translation="IEGR" polyA_signal 4664..5140 /label=hGH poly(A) signal /note="human growth hormone polyadenylation signal" primer_bind complement(4863..4882) /label=hGH-PA-R /note="Human growth hormone terminator, reverse primer" repeat_region 5180..5320 /label=AAV2 ITR /note="inverted terminal repeat of adeno-associated virus serotype 2" repeat_region 5180..5309 /label=AAV2 ITR rep_origin 5395..5850 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(5482..5501) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 5692..5713 /label=F1ori-F /note="F1 origin, forward primer" primer_bind complement(5867..5886) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" primer_bind 5986..6008 /label=pGEX 3' /note="pGEX vectors, reverse primer" primer_bind complement(6046..6064) /label=pBRforEco /note="pBR322 vectors, upsteam of EcoRI site, forward primer" promoter 6132..6236 /gene="bla" /label=AmpR promoter CDS 6237..7097 /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind complement(6455..6474) /label=Amp-R /note="Ampicillin resistance gene, reverse primer" rep_origin 7268..7856 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 7757..7776 /label=pBR322ori-F /note="pBR322 origin, forward primer" ORIGIN 1 cctgcaggca gctgcgcgct cgctcgctca ctgaggccgc ccgggcgtcg ggcgaccttt 61 ggtcgcccgg cctcagtgag cgagcgagcg cgcagagagg gagtggccaa ctccatcact 121 aggggttcct gcggccgcac gcgtcggatt accgaggctg gtcacgtcgt cgcaggtgat 181 aggccggggg ccctggtctc tgccggctgt gagttgcgca gcggccaagc accattcccc 241 cgcgccgcag tggtacgcgc cactccgggg ctgcacgagc gggccaccgc cgtgccaggt 301 gaatggaagt cccgcaggcc ggaagtggac gagcctactc gcccgggcgc gggggggcgc 361 aagagcgcgc agcatcttca ttgaggaacc cgggcggcga acatggagtt ccatgtgcgt 421 cttatgtaaa gagagcgacg ggcgtctcca ccaattgacg agcgtagctc tcaggttccg 481 ccccgccagt atgcaaatga ggtggcactc cgaccaatgg cgcgcgcagg ggcgggctca 541 gcgcgcgcgg tcacgttttc cactatgtga cagcggaggg cgacgcggcg gcagcggcgc 601 tactgggact agcggctccg ggcggctgcg gcgcaggccg agcgcaccaa gtgacgggcc 661 gagcaaggga tctagagtcg actccggaat aacttcgtat aggatacttt atacgaagtt 721 atgcagaatg gtagctggat tgtagctgct attagcaata tgaaacctct taataacttc 781 gtatagcata cattatacga agttatggtt agacgttgat cctggcgctg gcgcaagcag 841 cagggtgtct atccatgccg ctctcctggg cgcagctcat gggcagggtg ccggcggcct 901 gctcctccac ctcgggaggg aagccgtggc tgttaaggtg gatcacaaag tggcttaagc 961 tactgaacca gttcttgcaa gcagaattca cggcgatctt gccgcccttc ttggccttaa 1021 tgagaatctc gcggatcttg cgggcgtcca acttgccggt cagtccttta ggcacctcgt 1081 ccacgaacac aacaccaccg cgcagcttct tggcggttgt aacctggctg gccacatagt 1141 ccacgatctc cttctcggtc atggttttac cgtgttccag cacgacgact gcggcgggca 1201 gctcgccggc atcgtcgtcg ggcaggccgg cgaccccggc gtcgaagatg ttggggtgtt 1261 gcagcaggat gctctccagt tcggctgggg ctacctggta gcccttgtat ttgatcaggc 1321 tcttcagccg gtccacgatg aagaagtgct cgtcctcgtc ccagtaggcg atgtcgccgc 1381 tgtgcagcca gccgtccttg tcgatgagag cgtttgtagc ctcggggttg ttaacgtagc 1441 cgctcatgat catggggcca cggacgcaca gctcgccgcg ctggttcaca cccagtgtct 1501 taccggtgtc caagtccacc accttagcct cgaagaaggg caccaccttg cctactgcgc 1561 caggcttgtc gtccccttcg ggggtgatca gaatggcgct ggttgtttct gtcaggccgt 1621 agccctggcg gatgcctggt aggtggaagc gtttggccac ggcctcacct acctccttgc 1681 tgagcggcgc cccgccgctg gcgatctcgt gcaagttgct taggtcgtac ttgtcgatga 1741 gagtgctctt agcgaagaag ctaaatagtg tgggcaccag cagggcagat tgaatcttat 1801 agtcttgcaa gctgcgcaag aatagctcct cctcgaagcg gtacatgagc acgacccgaa 1861 agccgcagat caagtagccc agcgtggtga acatgccgaa gccgtggtga aatggcacca 1921 cgctgaggat agcggtgtcg gggatgatct ggttgccgaa gatggggtcg cgggcatgac 1981 tgaatcggac acaagcggtg cggtgcggta gggctacgcc cttgggcaat ccggtactgc 2041 cactactgtt catgatcagg gcgatggttt tgtcccggtc gaagctctcg ggcacgaagt 2101 cgtactcgtt gaagccgggt ggcaaatggg aagtcacgaa ggtgtacatg ctttggaagc 2161 cctggtagtc ggtcttgcta tccatgatga tgatcttttg tatgatcggt agcttctttt 2221 gcacgttgag gatcttttgc agccctttct tgctcacgaa tacgacggtg ggctggctga 2281 tgcccatgct gttcagcagc tcgcgctcgt tgtagatgtc gttagctggg gccacagcca 2341 caccgatgaa cagggcaccc aacacgggca tgaagaactg caagctattc tcgctgcaca 2401 ccacgatccg atggtttgta ttcagcccat agcgcttcat agcttctgcc agccgaacgc 2461 tcatctcgaa gtactcggcg taggtaatgt ccacctcgat atgtgcgtcg gtaaaggcga 2521 tggtgccggg caccagggcg tagcgcttca tggctttgtg cagctgctcg ccggcggtcc 2581 cgtcttcgag tgggtagaat ggcgctgggc ccttcttaat gtttttggca tcttcacctg 2641 cagggccctg aaaatacagg ttttcggatc ctgaaccgcc tgccgatccc tcatgccact 2701 ctattttctg agcttcgaaa atatcgttca ggccgctagc tgcggccgct ccacccttat 2761 cgtcatcgtc cttgtagtcg atgtcatgat ctttataatc accgtcatgg tctttgtagt 2821 cctgcaaagg aagatagata gataagatct ccacacgcct cttcccccaa ccagccgata 2881 aaactgacca gggacatcac accagagatt ttaaagaaaa tattaccgta tgctgggtgg 2941 tggctttggg acaaaggact tgcctggagt gcctgagacc catagtatgg cctccatact 3001 tcccctcaaa ataaaagtca gagctggaga atcagctcaa tggtgaagag aagcacccac 3061 acggctgctt acacccatct gtaactcaca gttccagggg atccaatgcc ctcttctgtc 3121 ccctatggtc accaaacatg caagtggtgc accgacatac atacaggcaa aacacccata 3181 tactttaaag taaaaattta aaaaaggaaa agtcatgtta aaactgaaac ataagagctt 3241 cagctattag gagacttgaa cactgagaga cagaaatgaa aaggaatatt ctgtgatcga 3301 atgcatgtgt gtgagcaggc tcctccgagg tcttactgga ctgtctgtta agtgcatcag 3361 atacaaaaat gcaaagatga cgtggtatcg ttatttggaa ggacaaagta caataaatac 3421 catctacagg attaagaagt actgccatcc tgcaagtcct ggtacttgct gcttgaagac 3481 gggcgacaaa ctatggaggg agccacccgt gtcctgtgtg cgagggcctg gcctgaggct 3541 gacctacctt gtcatcgtca tccttgtagt ccatggtggc ctctccttcg agtgcaaaaa 3601 gaacaagtag cttgtattct atagtgtcac ctaaatgcta gcctatagtg agtcgtatta 3661 agtactctag ccttaagagc tgtaattgaa ctgggagtgg acacctgtgg agagaaaggc 3721 aaagtggatg tcagtaagac caataggtgc ctatcagaaa cgcaagagtc ttctctgtct 3781 cgacaagccc agtttctatt ggtctcctta aacctgtctt gtaaccttga tacttacctg 3841 cccagtgcct cacgaccaac tttcgctacc ttaggaccgt tatagttact gcagcgctag 3901 cataacttcg tataaagtat cctatacgaa gttatttgcc ttaacccaga aattatcact 3961 gttattcttt agaatggtgc aaagaataac ttcgtataat gtatgctata cgaagttatg 4021 aattcgatat caagcttatc gataatcaac ctctggatta caaaatttgt gaaagattga 4081 ctggtattct taactatgtt gctcctttta cgctatgtgg atacgctgct ttaatgcctt 4141 tgtatcatgc tattgcttcc cgtatggctt tcattttctc ctccttgtat aaatcctggt 4201 tgctgtctct ttatgaggag ttgtggcccg ttgtcaggca acgtggcgtg gtgtgcactg 4261 tgtttgctga cgcaaccccc actggttggg gcattgccac cacctgtcag ctcctttccg 4321 ggactttcgc tttccccctc cctattgcca cggcggaact catcgccgcc tgccttgccc 4381 gctgctggac aggggctcgg ctgttgggca ctgacaattc cgtggtgttg tcggggaaat 4441 catcgtcctt tccttggctg ctcgcctatg ttgccacctg gattctgcgc gggacgtcct 4501 tctgctacgt cccttcggcc ctcaatccag cggaccttcc ttcccgcggc ctgctgccgg 4561 ctctgcggcc tcttccgcgt cttcgccttc gccctcagac gagtcggatc tccctttggg 4621 ccgcctcccc gcatcgatac cgagcgctgc tcgagagatc tacgggtggc atccctgtga 4681 cccctcccca gtgcctctcc tggccctgga agttgccact ccagtgccca ccagccttgt 4741 cctaataaaa ttaagttgca tcattttgtc tgactaggtg tccttctata atattatggg 4801 gtggaggggg gtggtatgga gcaaggggca agttgggaag acaacctgta gggcctgcgg 4861 ggtctattgg gaaccaagct ggagtgcagt ggcacaatct tggctcactg caatctccgc 4921 ctcctgggtt caagcgattc tcctgcctca gcctcccgag ttgttgggat tccaggcatg 4981 catgaccagg ctcagctaat ttttgttttt ttggtagaga cggggtttca ccatattggc 5041 caggctggtc tccaactcct aatctcaggt gatctaccca ccttggcctc ccaaattgct 5101 gggattacag gcgtgaacca ctgctccctt ccctgtcctt ctgattttgt aggtaaccac 5161 gtgcggaccg agcggccgca ggaaccccta gtgatggagt tggccactcc ctctctgcgc 5221 gctcgctcgc tcactgaggc cgggcgacca aaggtcgccc gacgcccggg ctttgcccgg 5281 gcggcctcag tgagcgagcg agcgcgcagc tgcctgcagg ggcgcctgat gcggtatttt 5341 ctccttacgc atctgtgcgg tatttcacac cgcatacgtc aaagcaacca tagtacgcgc 5401 cctgtagcgg cgcattaagc gcggcgggtg tggtggttac gcgcagcgtg accgctacac 5461 ttgccagcgc cttagcgccc gctcctttcg ctttcttccc ttcctttctc gccacgttcg 5521 ccggctttcc ccgtcaagct ctaaatcggg ggctcccttt agggttccga tttagtgctt 5581 tacggcacct cgaccccaaa aaacttgatt tgggtgatgg ttcacgtagt gggccatcgc 5641 cctgatagac ggtttttcgc cctttgacgt tggagtccac gttctttaat agtggactct 5701 tgttccaaac tggaacaaca ctcaactcta tctcgggcta ttcttttgat ttataaggga 5761 ttttgccgat ttcggtctat tggttaaaaa atgagctgat ttaacaaaaa tttaacgcga 5821 attttaacaa aatattaacg tttacaattt tatggtgcac tctcagtaca atctgctctg 5881 atgccgcata gttaagccag ccccgacacc cgccaacacc cgctgacgcg ccctgacggg 5941 cttgtctgct cccggcatcc gcttacagac aagctgtgac cgtctccggg agctgcatgt 6001 gtcagaggtt ttcaccgtca tcaccgaaac gcgcgagacg aaagggcctc gtgatacgcc 6061 tatttttata ggttaatgtc atgataataa tggtttctta gacgtcaggt ggcacttttc 6121 ggggaaatgt gcgcggaacc cctatttgtt tatttttcta aatacattca aatatgtatc 6181 cgctcatgag acaataaccc tgataaatgc ttcaataata ttgaaaaagg aagagtatga 6241 gtattcaaca tttccgtgtc gcccttattc ccttttttgc ggcattttgc cttcctgttt 6301 ttgctcaccc agaaacgctg gtgaaagtaa aagatgctga agatcagttg ggtgcacgag 6361 tgggttacat cgaactggat ctcaacagcg gtaagatcct tgagagtttt cgccccgaag 6421 aacgttttcc aatgatgagc acttttaaag ttctgctatg tggcgcggta ttatcccgta 6481 ttgacgccgg gcaagagcaa ctcggtcgcc gcatacacta ttctcagaat gacttggttg 6541 agtactcacc agtcacagaa aagcatctta cggatggcat gacagtaaga gaattatgca 6601 gtgctgccat aaccatgagt gataacactg cggccaactt acttctgaca acgatcggag 6661 gaccgaagga gctaaccgct tttttgcaca acatggggga tcatgtaact cgccttgatc 6721 gttgggaacc ggagctgaat gaagccatac caaacgacga gcgtgacacc acgatgcctg 6781 tagcaatggc aacaacgttg cgcaaactat taactggcga actacttact ctagcttccc 6841 ggcaacaatt aatagactgg atggaggcgg ataaagttgc aggaccactt ctgcgctcgg 6901 cccttccggc tggctggttt attgctgata aatctggagc cggtgagcgt gggtctcgcg 6961 gtatcattgc agcactgggg ccagatggta agccctcccg tatcgtagtt atctacacga 7021 cggggagtca ggcaactatg gatgaacgaa atagacagat cgctgagata ggtgcctcac 7081 tgattaagca ttggtaactg tcagaccaag tttactcata tatactttag attgatttaa 7141 aacttcattt ttaatttaaa aggatctagg tgaagatcct ttttgataat ctcatgacca 7201 aaatccctta acgtgagttt tcgttccact gagcgtcaga ccccgtagaa aagatcaaag 7261 gatcttcttg agatcctttt tttctgcgcg taatctgctg cttgcaaaca aaaaaaccac 7321 cgctaccagc ggtggtttgt ttgccggatc aagagctacc aactcttttt ccgaaggtaa 7381 ctggcttcag cagagcgcag ataccaaata ctgttcttct agtgtagccg tagttaggcc 7441 accacttcaa gaactctgta gcaccgccta catacctcgc tctgctaatc ctgttaccag 7501 tggctgctgc cagtggcgat aagtcgtgtc ttaccgggtt ggactcaaga cgatagttac 7561 cggataaggc gcagcggtcg ggctgaacgg ggggttcgtg cacacagccc agcttggagc 7621 gaacgaccta caccgaactg agatacctac agcgtgagct atgagaaagc gccacgcttc 7681 ccgaagggag aaaggcggac aggtatccgg taagcggcag ggtcggaaca ggagagcgca 7741 cgagggagct tccaggggga aacgcctggt atctttatag tcctgtcggg tttcgccacc 7801 tctgacttga gcgtcgattt ttgtgatgct cgtcaggggg gcggagccta tggaaaaacg 7861 ccagcaacgc ggccttttta cggttcctgg ccttttgctg gccttttgct cacatgt //
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