质粒名称: | pCR4-24XMS2SL-stable |
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出品公司: | 爱迪基因 |
目录编号: | 31865 |
存储实验室: | Robert Singer |
载体骨架基本信息 |
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载体名称: | pCR4Blunt-TOPO |
载体出品公司: | Invitrogen |
载体抗性: | 氨苄青霉素 |
空载体大小: | 3956 bp |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | -- |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | 24xMS2 Stem Loops - Stable |
物种来源: | -- |
插入大小: | 1300 bp |
基因突变: | -- |
GenBank编号 | -- |
启动子 | -- |
标签/融合蛋白: | -- |
克隆方法: | TOPO克隆 |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | M13F |
3' 测序引物 | M13R |
文献引用方法 |
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材料和方法部分: | pCR4-24XMS2SL-stable was a gift from Robert Singer (Addgene plasmid # 31865 ; http://n2t.net/addgene:31865 ; RRID:Addgene_31865) |
参考文献部分: | Localization of ASH1 mRNA particles in living yeast. Bertrand E, Chartrand P, Schaefer M, Shenoy SM, Singer RH, Long RM. Mol Cell. 1998 Oct . 2(4):437-45. 10.1016/S1097-2765(00)80143-4 PubMed 9809065 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pCR4-24XMS2SL-stable 5256 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION synthetic circular DNA ACCESSION . VERSION . KEYWORDS pCR4-24XMS2SL-stable SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 5256) AUTHORS Bertrand E, Chartrand P, Schaefer M, Shenoy SM, Singer RH, Long RM TITLE Localization of ASH1 mRNA particles in living yeast. JOURNAL Mol Cell. 1998 Oct . 2(4):437-45. PUBMED 9809065 REFERENCE 2 (bases 1 to 5256) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..5256 /organism="synthetic DNA construct" /mol_type="other DNA" promoter complement(35..53) /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase" primer_bind complement(74..90) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(74..90) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(87..109) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 98..114 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(122..152) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 167..188 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(305..322) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(476..1064) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(556..575) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS 1372..1750 /label=ISS /note="immunostimulatory sequence from the AmpR gene; contains unmethylated CpG dinucleotides in the context of 5'-AACGTT-3' (Sato et al., 1996)" primer_bind complement(1406..1425) /label=Amp-R /note="Ampicillin resistance gene, reverse primer" CDS complement(2296..3090) /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(2407..2426) /label=Neo-F /note="Neomycin resistance gene, forward primer" primer_bind 3017..3036 /label=Neo-R /note="Neomycin resistance gene, reverse primer" CDS complement(3439..78) /codon_start=1 /gene="lacZ fragment" /product="LacZ-alpha fragment of beta-galactosidase" /label=lacZ-alpha /translation="MTMITPSSELTLTKGTSPAGLNEFALRSDEPWNTGATRDRRRLKI RPGGTADARAFLAISTVGSDEPWNTGATRDRRRLKIRPGGTADARAFLAISTVGSDEPW NTGATRDRRRLKIRPGGTADARAFLAISTVGSDEPWNTGATRDRRRLKIRPGGTADARA FLAISTVGSDEPWNTGATRDRRRLKIRPGGTADARAFLAISTVGSDEPWNTGATRDRRR LKIRPGGTADARAFLAISTVGSDEPWNTGATRDRRRLKIRPGGTADARAFLAISTVGSD EPWNTGATRDRRRLKIRPGGTADARAFLAISTVGSDEPWNTGATRDRRRLKIRPGGTAD ARAFLAISTVGSDEPWNTGATRDRRRLKIRPGGTADARAFLAISTVGSDEPWNTGATRD RRRLKIRPGGTADARAFLAISTVGSDEPWNTGATRDRRRLKIRPGGTADARAFLAISTV GSKGEFAAAKFNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR TDRPSQQLRSLYVRQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKV SRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI" primer_bind complement(3541..3560) /label=ccdB-fwd /note="ccdB gene, forward primer" primer_bind 3864..3886 /label=M13/pUC Forward /note="In lacZ gene" primer_bind 3878..3895 /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind 3879..3895 /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind 3902..3921 /label=T7 /note="T7 promoter, forward primer" promoter 3902..3920 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" ORIGIN 1 aagggcgaat tcgtttaaac ctgcaggact agtcccttta gtgagggtta attctgagct 61 tggcgtaatc atggtcatag ctgtttcctg tgtgaaattg ttatccgctc acaattccac 121 acaacatacg agccggaagc ataaagtgta aagcctgggg tgcctaatga gtgagctaac 181 tcacattaat tgcgttgcgc tcactgcccg ctttccagtc gggaaacctg tcgtgccagc 241 tgcattaatg aatcggccaa cgcgcgggga gaggcggttt gcgtattggg cgctcttccg 301 cttcctcgct cactgactcg ctgcgctcgg tcgttcggct gcggcgagcg gtatcagctc 361 actcaaaggc ggtaatacgg ttatccacag aatcagggga taacgcagga aagaacatgt 421 gagcaaaagg ccagcaaaag gccaggaacc gtaaaaaggc cgcgttgctg gcgtttttcc 481 ataggctccg cccccctgac gagcatcaca aaaatcgacg ctcaagtcag aggtggcgaa 541 acccgacagg actataaaga taccaggcgt ttccccctgg aagctccctc gtgcgctctc 601 ctgttccgac cctgccgctt accggatacc tgtccgcctt tctcccttcg ggaagcgtgg 661 cgctttctca tagctcacgc tgtaggtatc tcagttcggt gtaggtcgtt cgctccaagc 721 tgggctgtgt gcacgaaccc cccgttcagc ccgaccgctg cgccttatcc ggtaactatc 781 gtcttgagtc caacccggta agacacgact tatcgccact ggcagcagcc actggtaaca 841 ggattagcag agcgaggtat gtaggcggtg ctacagagtt cttgaagtgg tggcctaact 901 acggctacac tagaagaaca gtatttggta tctgcgctct gctgaagcca gttaccttcg 961 gaaaaagagt tggtagctct tgatccggca aacaaaccac cgctggtagc ggtggttttt 1021 ttgtttgcaa gcagcagatt acgcgcagaa aaaaaggatc tcaagaagat cctttgatct 1081 tttctacggg gtctgacgct cagtggaacg aaaactcacg ttaagggatt ttggtcatga 1141 gacaataacc ctgataaatg cttcaataat attgaaaaag gaagagtatg agtattcaac 1201 atttccgtgt cgcccttatt cccttttttg cggcattttg ccttcctgtt tttgctcacc 1261 cagaaacgct ggtgaaagta aaagatgctg aagatcagtt gggtgcacga gtgggttaca 1321 tcgaactgga tctcaacagc ggtaagatcc ttgagagttt tcgccccgaa gaacgttttc 1381 caatgatgag cacttttaaa gttctgctat gtggcgcggt attatcccgt attgacgccg 1441 ggcaagagca actcggtcgc cgcatacact attctcagaa tgacttggtt gagtactcac 1501 cagtcacaga aaagcatctt acggatggca tgacagtaag agaattatgc agtgctgcca 1561 taaccatgag tgataacact gcggccaact tacttctgac aacgatcgga ggaccgaagg 1621 agctaaccgc ttttttgcac aacatggggg atcatgtaac tcgccttgat cgttgggaac 1681 cggagctgaa tgaagccata ccaaacgacg agcgtgacac cacgatgcct gtagcaatgg 1741 caacaacgtt gcgcaaacta ttaactggcg aactacttac tctagcttcc cggcaacaat 1801 taatagactg gatggaggcg gataaagttg caggaccact tctgcgctcg gccttccggc 1861 tggctggttt attgctgata aatctggagc cggtgagcgt ggtctcgcgg tatcattgca 1921 gcactggggc cagatggtaa gccctcccgt atcgtagtta tctacacgac ggggagtcag 1981 gcaactatgg atgaacgaaa tagacagatc gctgagatag gtgcctcact gattaagcat 2041 tggtaactgt cagaccaagt ttactcatat atactttaga ttgatttaaa acttcatttt 2101 taatttaaaa ggatctaggt gaagatcctt tttgataatc tcatgagcgg atacatattt 2161 gaatgtattt agaaaaataa acaaataggg gttccgcgca catttccccg aaaagtgcca 2221 cctgatgcgg tgtgaaatac cgcacagatg cgtaaggaga aaataccgca tcaggaaatt 2281 gtaagcgtta ataattcaga agaactcgtc aagaaggcga tagaaggcga tgcgctgcga 2341 atcgggagcg gcgataccgt aaagcacgag gaagcggtca gcccattcgc cgccaagctc 2401 ttcagcaata tcacgggtag ccaacgctat gtcctgatag cggtccgcca cacccagccg 2461 gccacagtcg atgaatccag aaaagcggcc attttccacc atgatattcg gcaagcaggc 2521 atcgccatgg gtcacgacga gatcctcgcc gtcgggcatg ctcgccttga gcctggcgaa 2581 cagttcggct ggcgcgagcc cctgatgctc ttcgtccaga tcatcctgat cgacaagacc 2641 ggcttccatc cgagtacgtg ctcgctcgat gcgatgtttc gcttggtggt cgaatgggca 2701 ggtagccgga tcaagcgtat gcagccgccg cattgcatca gccatgatgg atactttctc 2761 ggcaggagca aggtgagatg acaggagatc ctgccccggc acttcgccca atagcagcca 2821 gtcccttccc gcttcagtga caacgtcgag cacagctgcg caaggaacgc ccgtcgtggc 2881 cagccacgat agccgcgctg cctcgtcttg cagttcattc agggcaccgg acaggtcggt 2941 cttgacaaaa agaaccgggc gcccctgcgc tgacagccgg aacacggcgg catcagagca 3001 gccgattgtc tgttgtgccc agtcatagcc gaatagcctc tccacccaag cggccggaga 3061 acctgcgtgc aatccatctt gttcaatcat gcgaaacgat cctcatcctg tctcttgatc 3121 agagcttgat cccctgcgcc atcagatcct tggcggcaag aaagccatcc agtttacttt 3181 gcagggcttc ccaaccttac cagagggcgc cccagctggc aattccggtt cgcttgctgt 3241 ccataaaacc gcccagtcta gctatcgcca tgtaagccca ctgcaagcta cctgctttct 3301 ctttgcgctt gcgttttccc ttgtccagat agcccagtag ctgacattca tccggggtca 3361 gcaccgtttc tgcggactgg ctttctacgt gaaaaggatc taggtgaaga tcctttttga 3421 taatctcatg cctgacattt atattcccca gaacatcagg ttaatggcgt ttttgatgtc 3481 attttcgcgg tggctgagat cagccacttc ttccccgata acggagaccg gcacactggc 3541 catatcggtg gtcatcatgc gccagctttc atccccgata tgcaccaccg ggtaaagttc 3601 acgggagact ttatctgaca gcagacgtgc actggccagg gggatcacca tccgtcgccc 3661 cggcgtgtca ataatatcac tctgtacatc cacaaacaga cgataacggc tctctctttt 3721 ataggtgtaa accttaaact gccgtacgta taggctgcgc aactgttggg aagggcgatc 3781 ggtgcgggcc tcttcgctat tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt 3841 aagttgggta acgccagggt tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt 3901 gtaatacgac tcactatagg gcgaattgaa tttagcggcc gcgaattcgc ccttggatcc 3961 tacggtactt attgccaaga aagcacgagc atcagccgtg cctccaggtc gaatcttcaa 4021 acgacgacga tcacgcgtcg ctccagtatt ccagggttca tcagatccta cggtacttat 4081 tgccaagaaa gcacgagcat cagccgtgcc tccaggtcga atcttcaaac gacgacgatc 4141 acgcgtcgct ccagtattcc agggttcatc agatcctacg gtacttattg ccaagaaagc 4201 acgagcatca gccgtgcctc caggtcgaat cttcaaacga cgacgatcac gcgtcgctcc 4261 agtattccag ggttcatcag atcctacggt acttattgcc aagaaagcac gagcatcagc 4321 cgtgcctcca ggtcgaatct tcaaacgacg acgatcacgc gtcgctccag tattccaggg 4381 ttcatcagat cctacggtac ttattgccaa gaaagcacga gcatcagccg tgcctccagg 4441 tcgaatcttc aaacgacgac gatcacgcgt cgctccagta ttccagggtt catcagatcc 4501 tacggtactt attgccaaga aagcacgagc atcagccgtg cctccaggtc gaatcttcaa 4561 acgacgacga tcacgcgtcg ctccagtatt ccagggttca tcagatccta cggtacttat 4621 tgccaagaaa gcacgagcat cagccgtgcc tccaggtcga atcttcaaac gacgacgatc 4681 acgcgtcgct ccagtattcc agggttcatc agatcctacg gtacttattg ccaagaaagc 4741 acgagcatca gccgtgcctc caggtcgaat cttcaaacga cgacgatcac gcgtcgctcc 4801 agtattccag ggttcatcag atcctacggt acttattgcc aagaaagcac gagcatcagc 4861 cgtgcctcca ggtcgaatct tcaaacgacg acgatcacgc gtcgctccag tattccaggg 4921 ttcatcagat cctacggtac ttattgccaa gaaagcacga gcatcagccg tgcctccagg 4981 tcgaatcttc aaacgacgac gatcacgcgt cgctccagta ttccagggtt catcagatcc 5041 tacggtactt attgccaaga aagcacgagc atcagccgtg cctccaggtc gaatcttcaa 5101 acgacgacga tcacgcgtcg ctccagtatt ccagggttca tcagatccta cggtacttat 5161 tgccaagaaa gcacgagcat cagccgtgcc tccaggtcga atcttcaaac gacgacgatc 5221 acgcgtcgct ccagtattcc agggttcatc agatct //