质粒名称: | pHEA |
---|---|
出品公司: | Addgene |
目录编号: | 168297 |
存储实验室: | Luis Ángel Fernández |
载体骨架基本信息 |
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载体名称: | pAK-Not |
载体出品公司: | Luis Angel Fernández |
空载体大小: | 3735 bp |
完整质粒大小: | 4974 bp |
载体修饰: | -- |
载体类型: | 细菌表达 |
筛选标记: | -- |
载体抗性: | 氯霉素25 μg/mL |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | 高拷贝 |
插入基因信息 |
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插入基因名称: | Enterohemorraghic E. coli autotransporter EhaA C-terminal fragment (C-EhaA) |
物种来源: | Escherichia coli |
插入大小: | 1239 bp |
基因突变: | -- |
GenBank编号 | -- |
启动子: | LacI-Plac |
标签/融合蛋白: |
PelB signal peptide(插入物上的N端)
6xHis(插入件上的N端子)
E-tag(插入件上的N端子)
|
克隆方法: | 限制性内切酶 |
5’克隆位点: | -- |
3’克隆位点: | -- |
5’测序引物 | -- |
3’测序引物 | -- |
文献引用方法 |
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材料和方法部分: | pHEA was a gift from Luis Ángel Fernández (Addgene plasmid # 168297 ; http://n2t.net/addgene:168297 ; RRID:Addgene_168297) |
参考文献部分: | Comparative analysis of the biochemical and functional properties of C-terminal domains of autotransporters. Marin E, Bodelon G, Fernandez LA. J Bacteriol. 2010 Nov;192(21):5588-602. doi: 10.1128/JB.00432-10. Epub 2010 Aug 27. 10.1128/JB.00432-10 PubMed 20802036 |
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载体基本信息
载体图谱质粒图谱和多克隆位点信息
载体简介
载体序列
LOCUS pHEA 4974 bp ds-DNA circular SYN 09-JUN-2021 DEFINITION Bacterial surface display of polypeptides (nanobodies) in E. coli. ACCESSION . VERSION . KEYWORDS pHEA SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 4974) AUTHORS Marin E, Bodelon G, Fernandez LA TITLE Comparative analysis of the biochemical and functional properties of C-terminal domains of autotransporters. JOURNAL J Bacteriol. 2010 Nov;192(21):5588-602. doi: 10.1128/JB.00432-10. Epub 2010 Aug 27. PUBMED 20802036 REFERENCE 2 (bases 1 to 4974) AUTHORS . TITLE Direct Submission JOURNAL Exported Jun 9, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..4974 /organism="synthetic DNA construct" /mol_type="other DNA" protein_bind 591..612 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." promoter 627..657 /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 665..681 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 670..692 /label=M13/pUC Reverse /note="In lacZ gene" primer_bind 689..705 /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind 689..705 /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" sig_peptide 741..806 /gene="pelB (fragment)" /product="leader peptide for secretion" /label=pelB signal sequence CDS 807..824 /codon_start=1 /product="6xHis affinity tag" /label=6xHis /translation="HHHHHH" rep_origin 2051..2506 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(2138..2157) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 2348..2369 /label=F1ori-F /note="F1 origin, forward primer" CDS 2693..3352 /codon_start=1 /gene="cat" /product="chloramphenicol acetyltransferase" /label=CmR /note="confers resistance to chloramphenicol" /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA" primer_bind complement(2759..2778) /label=CAT-R /note="Chloramphenicol resistance gene, reverse primer" rep_origin 3684..4272 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind 4173..4192 /label=pBR322ori-F /note="pBR322 origin, forward primer" promoter 4337..4414 /gene="lacI" /label=lacI promoter CDS 4415..523 /codon_start=1 /gene="lacI" /product="lac repressor" /label=lacI /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR ALADSLMQLARQVSRLESGQ" primer_bind complement(4434..4453) /label=LacI-R /note="LacI, reverse primer" ORIGIN 1 cccattaagt tctgtctcgg cgcgtctgcg tctggctggc tggcataaat atctcactcg 61 caatcaaatt cagccgatag cggaacggga aggcgactgg agtgccatgt ccggttttca 121 acaaaccatg caaatgctga atgagggcat cgttcccact gcgatgctgg ttgccaacga 181 tcagatggcg ctgggcgcaa tgcgcgccat taccgagtcc gggctgcgcg ttggtgcgga 241 catctcggta gtgggatacg acgataccga agacagctca tgttatatcc cgccgttaac 301 caccatcaaa caggattttc gcctgctggg gcaaaccagc gtggaccgct tgctgcaact 361 ctctcagggc caggcggtga agggcaatca gctgttgccc gtctcactgg tgaaaagaaa 421 aaccaccctg gcgcccaata cgcaaaccgc ctctccccgc gcgttggccg attcattaat 481 gcagctggca cgacaggttt cccgactgga aagcgggcag tgagcggtac ccgataaaag 541 cggcttcctg acaggaggcc gttttgtttt gcagcccacc tcaacgcaat taatgtgagt 601 tagctcactc attaggcacc ccaggcttta cactttatgc ttccggctcg tatgttgtgt 661 ggaattgtga gcggataaca atttcacaca ggaaacagct atgaccatga ttacgaattt 721 ctagataacg agggcaaatc atgaaatacc tattgcctac ggcagccgct ggattgttat 781 tactcgcggc ccagccggcc atggcgcatc accatcacca tcacgcggcc gctgcggggg 841 ccgaattcgt cgacggtgcg ccggtgccgt atccggatcc gctggaaccg atcgacaatt 901 cagccgcaat tagtatggca aatccacgtc caccaacacc gcggacacct acgccgggtc 961 cggatctgaa tgtggataat gacctgcgac cggaggcggg tagctacatt gcgaaccttg 1021 cagcagcgaa taccatgttc accacgcgtc tgcatgagcg tctgggtaat acgtactata 1081 ccgacatggt gacgggtgag cagaaacaaa ccactatgtg gatgcgccat gaaggtggtc 1141 ataataaatg gcgtgatggc agcggccagc tgaaaaccca aagcaatcgc tatgttctgc 1201 aactgggagg cgatgtcgcg cagtggagcc aaaacggcag cgaccgctgg catgttgggg 1261 tcatggcggg atatggcaac agcgacagca aaaccatttc ctcgcgaacc ggttatcgtg 1321 caaaagcgag tgtgaacgga tatagcacag gcctctatgc cacctggtat gccgatgacg 1381 agtcgcgtaa tggcgcgtat ctcgacagtt gggcgcagta cagctggttt gataacacag 1441 tgaaagggga tgacttacaa agtgaatcct ataaatcaaa aggatttacc gcttcactgg 1501 aagctggata caaacacaaa ttagctgaat ttaatggcag ccagggaacg cgtaatgaat 1561 ggtatgttca gccgcaagca caggttacct ggatgggagt caaagccgat aagcaccgcg 1621 aaagcaacgg aaccctcgtt catagcaacg gtgatggcaa tgttcaaacc cgacttggcg 1681 taaaaacctg gctgaagagc caccataaaa tggatgacgg taaatcccgc gagttccagc 1741 cgtttgtaga agtgaactgg ctacataaca gtaaggattt cagcaccagt atggatggcg 1801 tgtctgtcac tcaggatgga gcccgaaata ttgctgagat aaaaaccggg gtggaaggac 1861 agctaaatgc caacctgaat gtctggggga atgtgggcgt tcaggttgcc gataggggat 1921 ataatgacac ctctgcaatg gttggcatta agtggcaatt ctgaaagctt gacctgtgaa 1981 gtgaaaaatg gcgcacattg tgcgacattt tttttgtctg ccgtttaccg ctactgcgtc 2041 acggatcccc acgcgccctg tagcggcgca ttaagcgcgg cgggtgtggt ggttacgcgc 2101 agcgtgaccg ctacacttgc cagcgcccta gcgcccgctc ctttcgcttt cttcccttcc 2161 tttctcgcca cgttcgccgg ctttccccgt caagctctaa atcgggggct ccctttaggg 2221 ttccgattta gtgctttacg gcacctcgac cccaaaaaac ttgattaggg tgatggttca 2281 cgtagtgggc catcgccctg atagacggtt tttcgccctt tgacgttgga gtccacgttc 2341 tttaatagtg gactcttgtt ccaaactgga acaacactca accctatctc ggtctattct 2401 tttgatttat aagggatttt gccgatttcg gcctattggt taaaaaatga gctgatttaa 2461 caaaaattta acgcgaattt taacaaaata ttaacgctta caatttcagg tggcactttt 2521 cggggaaatg tgcgcggaac ccctatttgt ttatttttct aaatacattc aaatatgtat 2581 ccgctcatgt cgagacgttg ggtgaggttc caactttcac cataatgaaa taagatcact 2641 accgggcgta ttttttgagt tatcgagatt ttcaggagct aaggaagcta aaatggagaa 2701 aaaaatcact ggatatacca ccgttgatat atcccaatgg catcgtaaag aacattttga 2761 ggcatttcag tcagttgctc aatgtaccta taaccagacc gttcagctgg atattacggc 2821 ctttttaaag accgtaaaga aaaataagca caagttttat ccggccttta ttcacattct 2881 tgcccgcctg atgaatgctc atccggagtt ccgtatggca atgaaagacg gtgagctggt 2941 gatatgggat agtgttcacc cttgttacac cgttttccat gagcaaactg aaacgttttc 3001 atcgctctgg agtgaatacc acgacgattt ccggcagttt ctacacatat attcgcaaga 3061 tgtggcgtgt tacggtgaaa acctggccta tttccctaaa gggtttattg agaatatgtt 3121 tttcgtctca gccaatccct gggtgagttt caccagtttt gatttaaacg tggccaatat 3181 ggacaacttc ttcgcccccg ttttcaccat gggcaaatat tatacgcaag gcgacaaggt 3241 gctgatgccg ctggcgattc aggttcatca tgccgtttgt gatggcttcc atgtcggcag 3301 aatgcttaat gaattacaac agtactgcga tgagtggcag ggcggggcgt aattttttta 3361 aggcagttat tggtgccctt aaacgcctgg ttgctacgcc tgaataagtg ataataagcg 3421 gatgaatggc agaaattcga aagcaaattc gacccggtcg tcggttcagg gcagggtcgt 3481 taaatagccg cttatgtcta ttgctggttt accggtttat tgactaccgg aagcagtgtg 3541 accgtgtgct tctcaaatgc ctgaggccag tttgctcagg ctctccccgt ggaggtaata 3601 attgctcgaa tgaccaaaat cccttaacgt gagttttcgt tccactgagc gtcagacccc 3661 gtagaaaaga tcaaaggatc ttcttgagat cctttttttc tgcgcgtaat ctgctgcttg 3721 caaacaaaaa aaccaccgct accagcggtg gtttgtttgc cggatcaaga gctaccaact 3781 ctttttccga aggtaactgg cttcagcaga gcgcagatac caaatactgt tcttctagtg 3841 tagccgtagt taggccacca cttcaagaac tctgtagcac cgcctacata cctcgctctg 3901 ctaatcctgt taccagtggc tgctgccagt ggcgataagt cgtgtcttac cgggttggac 3961 tcaagacgat agttaccgga taaggcgcag cggtcgggct gaacgggggg ttcgtgcaca 4021 cagcccagct tggagcgaac gacctacacc gaactgagat acctacagcg tgagctatga 4081 gaaagcgcca cgcttcccga agggagaaag gcggacaggt atccggtaag cggcagggtc 4141 ggaacaggag agcgcacgag ggagcttcca gggggaaacg cctggtatct ttatagtcct 4201 gtcgggtttc gccacctctg acttgagcgt cgatttttgt gatgctcgtc aggggggcgg 4261 agcctatgga aaaacgccag caacgcggcc tttttacggt tcctggcctt ttgctggcct 4321 tttgctcaca tgacccgaca ccatcgaatg gcgcaaaacc tttcgcggta tggcatgata 4381 gcgcccggaa gagagtcaat tcagggtggt gaatgtgaaa ccagtaacgt tatacgatgt 4441 cgcagagtat gccggtgtct cttatcagac cgtttcccgc gtggtgaacc aggccagcca 4501 cgtttctgcg aaaacgcggg aaaaagtgga agcggcgatg gcggagctga attacattcc 4561 caaccgcgtg gcacaacaac tggcgggcaa acagtcgttg ctgattggcg ttgccacctc 4621 cagtctggcc ctgcacgcgc cgtcgcaaat tgtcgcggcg attaaatctc gcgccgatca 4681 actgggtgcc agcgtggtgg tgtcgatggt agaacgaagc ggcgtcgaag cctgtaaagc 4741 ggcggtgcac aatcttctcg cgcaacgcgt cagtgggctg atcattaact atccgctgga 4801 tgaccaggat gccattgctg tggaagctgc ctgcactaat gttccggcgt tatttcttga 4861 tgtctctgac cagacaccca tcaacagtat tattttctcc catgaagacg gtacgcgact 4921 gggcgtggag catctggtcg cattgggtca ccagcaaatc gcgctgttag cggg //