质粒名称: | BPK1520 |
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出品公司: | 爱迪基因 |
目录编号: | 65777 |
存储实验室: | Keith Joung |
载体骨架基本信息 |
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载体名称: | MLM3636 |
载体出品公司: | Joung lab (Addgene Plasmid # 43860) |
载体抗性: | 氨苄青霉素 |
空载体大小: | -- |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 哺乳细胞表达,CRISPR |
筛选标记: | -- |
高拷贝/低拷贝: | 高拷贝 |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | SpCas9 gRNA backbone, without spacer sequence |
物种来源: | Synthetic |
插入大小: | -- |
基因突变: | -- |
GenBank编号 | -- |
启动子 | U6 |
标签/融合蛋白: | -- |
克隆方法: | Gibson克隆 |
5' 克隆位点: | -- |
3' 克隆位点: | -- |
5' 测序引物 | OS280 (5'-CAGGGTTATTGTCTCATGAGCGG-3') |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | BPK1520 was a gift from Keith Joung (Addgene plasmid # 65777 ; http://n2t.net/addgene:65777 ; RRID:Addgene_65777) |
参考文献部分: | Engineered CRISPR-Cas9 nucleases with altered PAM specificities. Kleinstiver BP, Prew MS, Tsai SQ, Topkar VV, Nguyen NT, Zheng Z, Gonzales AP, Li Z, Peterson RT, Yeh JJ, Aryee MJ, Joung JK. Nature. 2015 Jun 22. doi: 10.1038/nature14592. 10.1038/nature14592 PubMed 26098369 |
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载体基本信息
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载体序列
LOCUS BPK1520 2280 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Human expression plasmid for SpCas9 sgRNA (need to clone in spacer into BsmBI sites): U6-BsmBIcassette-Sp-sgRNA. ACCESSION . VERSION . KEYWORDS BPK1520 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 2280) AUTHORS Kleinstiver BP, Prew MS, Tsai SQ, Topkar VV, Nguyen NT, Zheng Z, Gonzales AP, Li Z, Peterson RT, Yeh JJ, Aryee MJ, Joung JK TITLE Engineered CRISPR-Cas9 nucleases with altered PAM specificities. JOURNAL Nature. 2015 Jun 22. doi: 10.1038/nature14592. PUBMED 26098369 REFERENCE 2 (bases 1 to 2280) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..2280 /organism="synthetic DNA construct" /mol_type="other DNA" rep_origin complement(83..671) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(163..182) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(842..1702) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 1465..1484 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(1703..1807) /gene="bla" /label=AmpR promoter promoter 1914..2154 /label=U6 promoter /note="RNA polymerase III promoter for human U6 snRNA" primer_bind 1914..1934 /label=hU6-F /note="Human U6 promoter, forward primer" primer_bind 2085..2104 /label=LKO.1 5' /note="Human U6 promoter, forward primer" misc_RNA 2184..2259 /label=gRNA scaffold /note="guide RNA scaffold for the Streptococcus pyogenes CRISPR/Cas9 system" ORIGIN 1 cgaggtacct ctctacatat gacatgtgag caaaaggcca gcaaaaggcc aggaaccgta 61 aaaaggccgc gttgctggcg tttttccata ggctccgccc ccctgacgag catcacaaaa 121 atcgacgctc aagtcagagg tggcgaaacc cgacaggact ataaagatac caggcgtttc 181 cccctggaag ctccctcgtg cgctctcctg ttccgaccct gccgcttacc ggatacctgt 241 ccgcctttct cccttcggga agcgtggcgc tttctcatag ctcacgctgt aggtatctca 301 gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc gttcagcccg 361 accgctgcgc cttatccggt aactatcgtc ttgagtccaa cccggtaaga cacgacttat 421 cgccactggc agcagccact ggtaacagga ttagcagagc gaggtatgta ggcggtgcta 481 cagagttctt gaagtggtgg cctaactacg gctacactag aagaacagta tttggtatct 541 gcgctctgct gaagccagtt accttcggaa aaagagttgg tagctcttga tccggcaaac 601 aaaccaccgc tggtagcggt ggtttttttg tttgcaagca gcagattacg cgcagaaaaa 661 aaggatctca agaagatcct ttgatctttt ctacggggtc tgacgctcag tggaacgaaa 721 actcacgtta agggattttg gtcatgagat tatcaaaaag gatcttcacc tagatccttt 781 taaattaaaa atgaagtttt aaatcaatct aaagtatata tgagtaaact tggtctgaca 841 gttaccaatg cttaatcagt gaggcaccta tctcagcgat ctgtctattt cgttcatcca 901 tagttgcctg actccccgtc gtgtagataa ctacgatacg ggagggctta ccatctggcc 961 ccagtgctgc aatgataccg cgagacccac gctcaccggc tccagattta tcagcaataa 1021 accagccagc cggaagggcc gagcgcagaa gtggtcctgc aactttatcc gcctccatcc 1081 agtctattaa ttgttgccgg gaagctagag taagtagttc gccagttaat agtttgcgca 1141 acgttgttgc cattgctaca ggcatcgtgg tgtcacgctc gtcgtttggt atggcttcat 1201 tcagctccgg ttcccaacga tcaaggcgag ttacatgatc ccccatgttg tgcaaaaaag 1261 cggttagctc cttcggtcct ccgatcgttg tcagaagtaa gttggccgca gtgttatcac 1321 tcatggttat ggcagcactg cataattctc ttactgtcat gccatccgta agatgctttt 1381 ctgtgactgg tgagtactca accaagtcat tctgagaata gtgtatgcgg cgaccgagtt 1441 gctcttgccc ggcgtcaata cgggataata ccgcgccaca tagcagaact ttaaaagtgc 1501 tcatcattgg aaaacgttct tcggggcgaa aactctcaag gatcttaccg ctgttgagat 1561 ccagttcgat gtaacccact cgtgcaccca actgatcttc agcatctttt actttcacca 1621 gcgtttctgg gtgagcaaaa acaggaaggc aaaatgccgc aaaaaaggga ataagggcga 1681 cacggaaatg ttgaatactc atactcttcc tttttcaata ttattgaagc atttatcagg 1741 gttattgtct catgagcgga tacatatttg aatgtattta gaaaaataaa caaatagggg 1801 ttccgcgcac atttccccga aaagtgccac ctgacgtcgc tagctgtaca aaaaagcagg 1861 ctttaaagga accaattcag tcgactggat ccggtaccaa ggtcgggcag gaagagggcc 1921 tatttcccat gattccttca tatttgcata tacgatacaa ggctgttaga gagataatta 1981 gaattaattt gactgtaaac acaaagatat tagtacaaaa tacgtgacgt agaaagtaat 2041 aatttcttgg gtagtttgca gttttaaaat tatgttttaa aatggactat catatgctta 2101 ccgtaacttg aaagtatttc gatttcttgg ctttatatat cttgtggaaa ggacgaaaca 2161 ccggagacga ttaatgcgtc tccgttttag agctagaaat agcaagttaa aataaggcta 2221 gtccgttatc aacttgaaaa agtggcaccg agtcggtgct ttttttaagc ttgggccgct //
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