质粒名称: | pH3U3-mcs |
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出品公司: | Addgene |
目录编号: | 12609 |
存储实验室: | Scot Wolfe |
载体骨架基本信息 |
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载体名称: | pH3U3 |
载体出品公司: | Clontech |
空载体大小: | 5760bp |
完整质粒大小: | 5834bp |
载体类型: | 细菌表达 |
筛选标记: | URA3, HIS3 |
载体抗性: | Kanamycin |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | 低拷贝 |
插入基因信息 |
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插入基因名称: | Multiple cloning site in His3 Ura3 reporter plasmid |
物种来源: | S. cerevisiae (budding yeast) |
插入大小: | 44bp |
GenBank编号 | DQ515893 |
启动子: | CMV |
标签/融合蛋白: | 人细胞色素c氧化酶亚基VIII(N端) |
克隆方法: | 限制性内切酶 |
5’克隆位点: | NotI (not destroyed) |
3’克隆位点: | EcoRI (not destroyed) |
5’测序引物: | CAAATATGTATCCGCTCATGAC |
文献引用方法 |
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材料和方法部分: | pH3U3-mcs was a gift from Scot Wolfe (Addgene plasmid # 12609 ; http://n2t.net/addgene:12609 ; RRID:Addgene_12609) |
参考文献部分: | A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors. Meng X, Brodsky MH, Wolfe SA. Nat Biotechnol. 2005 Aug . 23(8):988-94. 10.1038/nbt1120 PubMed 16041365 |
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pH3U3-mcs载体质粒基本信息
pH3U3-mcs质粒图谱载体图谱和pH3U3-mcs载体序列质粒序列多克隆位点信息
pH3U3-mcs质粒载体简介
pH3U3-mcs质粒序列载体序列
LOCUS pH3U3-mcs 5834 bp DNA circular SYN 25-AUG-2024 DEFINITION synthetic circular DNA ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 5834) AUTHORS Meng X, Brodsky MH, Wolfe SA TITLE A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors. JOURNAL Nat Biotechnol. 2005 Aug . 23(8):988-94. PUBMED 16041365 REFERENCE 2 (bases 1 to 5834) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 25, 2024 from SnapGene Server 7.0.3 https://www.biofeng.com COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Nat Biotechnol. 2005 Aug . 23(8):988-94." FEATURES Location/Qualifiers source 1..5834 /mol_type="other DNA" /organism="synthetic DNA construct" terminator 12..98 /gene="Escherichia coli rrnB" /label=rrnB T1 terminator /note="transcription terminator T1 from the E. coli rrnB gene" CDS complement(633..1583) /codon_start=1 /gene="rep101" /product="RepA protein needed for replication with the pSC101 origin" /label=Rep101 /translation="MSELVVFKANELAISRYDLTEHETKLILCCVALLNPTIENPTRKE RTVSFTYNQYAQMMNISRENAYGVLAKATRELMTRTVEIRNPLVKGFEIFQWTNYAKFS SEKLELVFSEEILPYLFQLKKFIKYNLEHVKSFENKYSMRIYEWLLKELTQKKTHKANI EISLDEFKFMLMLENNYHEFKRLNQWVLKPISKDLNTYSNMKLVVDKRGRPTDTLIFQV ELDRQMDLVTELENNQIKMNGDKIPTTITSDSYLRNGLRKTLHDALTAKIQLTSFEAKF LSDMQSKHDLNGSFSWLTQKQRTTLENILAKYGRI" rep_origin 1631..1853 /label=pSC101 ori /note="low-copy replication origin that requires the Rep101 protein" terminator complement(2345..2439) /label=lambda t0 terminator /note="transcription terminator from phage lambda" CDS complement(2470..3264) /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(2581..2600) /label=Neo-F /note="Neomycin resistance gene, forward primer" primer_bind 3191..3210 /label=Neo-R /note="Neomycin resistance gene, reverse primer" terminator 3419..3505 /gene="Escherichia coli rrnB" /label=rrnB T1 terminator /note="transcription terminator T1 from the E. coli rrnB gene" terminator 3597..3624 /label=rrnB T2 terminator /note="transcription terminator T2 from the E. coli rrnB gene" primer_bind 3702..3720 /label=pBRforEco /note="pBR322 vectors, upsteam of EcoRI site, forward primer" promoter 3785..3815 /label=lac promoter /note="promoter for the E. coli lac operon" primer_bind 3825..3847 /label=M13/pUC Reverse /note="In lacZ gene" primer_bind 3844..3860 /label=M13 rev /note="common sequencing primer, one of multiple similar variants" CDS 3856..4518 /codon_start=1 /gene="S. cerevisiae HIS3" /product="imidazoleglycerol-phosphate dehydratase, required for histidine biosynthesis" /label=HIS3 /note="yeast auxotrophic marker" /translation="MTEQKALVKRITNETKIQIAISLKGGPLAIEHSIFPEKEAEAVAE QATQSQVINVHTGIGFLDHMIHALAKHSGWSLIVECIGDLHIDDHHTTEDCGIALGQAF KEALGAVRGVKRFGSGFAPLDEALSRAVVDLSNRPYAVVELGLQREKVGDLSCEMIPHF LESFAEASRITLHVDCLRGKNDHHRSESAFKALAVAIREATSPNGTNDVPSTKGVLM" CDS 4566..5369 /codon_start=1 /gene="S. cerevisiae URA3" /product="orotidine-5'-phosphate decarboxylase, required for uracil biosynthesis" /label=URA3 /note="yeast auxotrophic marker, counterselectable with 5-fluoroorotic acid (5-FOA)" /translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGE YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN" rep_origin complement(5378..5833) /direction=LEFT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(5515..5536) /label=F1ori-F /note="F1 origin, forward primer" primer_bind 5727..5746 /label=F1ori-R /note="F1 origin, reverse primer" ORIGIN 1 tctagaggca tcaaataaaa cgaaaggctc agtcgaaaga ctgggccttt cgttttatct 61 gttgtttgtc ggtgaacgct ctcctgagta ggacaaatcc gccgccctag acctagggta 121 cgggttttgc tgcccgcaaa cgggctgttc tggtgttgct agtttgttat cagaatcgca 181 gatccggctt caggtttgcc ggctgaaagc gctatttctt ccagaattgc catgattttt 241 tccccacggg aggcgtcact ggctcccgtg ttgtcggcag ctttgattcg ataagcagca 301 tcgcctgttt caggctgtct atgtgtgact gttgagctgt aacaagttgt ctcaggtgtt 361 caatttcatg ttctagttgc tttgttttac tggtttcacc tgttctatta ggtgttacat 421 gctgttcatc tgttacattg tcgatctgtt catggtgaac agctttaaat gcaccaaaaa 481 ctcgtaaaag ctctgatgta tctatctttt ttacaccgtt ttcatctgtg catatggaca 541 gttttccctt tgatatctaa cggtgaacag ttgttctact tttgtttgtt agtcttgatg 601 cttcactgat agatacaaga gccataagaa cctcagatcc ttccgtattt agccagtatg 661 ttctctagtg tggttcgttg tttttgcgtg agccatgaga acgaaccatt gagatcatgc 721 ttactttgca tgtcactcaa aaattttgcc tcaaaactgg tgagctgaat ttttgcagtt 781 aaagcatcgt gtagtgtttt tcttagtccg ttacgtaggt aggaatctga tgtaatggtt 841 gttggtattt tgtcaccatt catttttatc tggttgttct caagttcggt tacgagatcc 901 atttgtctat ctagttcaac ttggaaaatc aacgtatcag tcgggcggcc tcgcttatca 961 accaccaatt tcatattgct gtaagtgttt aaatctttac ttattggttt caaaacccat 1021 tggttaagcc ttttaaactc atggtagtta ttttcaagca ttaacatgaa cttaaattca 1081 tcaaggctaa tctctatatt tgccttgtga gttttctttt gtgttagttc ttttaataac 1141 cactcataaa tcctcataga gtatttgttt tcaaaagact taacatgttc cagattatat 1201 tttatgaatt tttttaactg gaaaagataa ggcaatatct cttcactaaa aactaattct 1261 aatttttcgc ttgagaactt ggcatagttt gtccactgga aaatctcaaa gcctttaacc 1321 aaaggattcc tgatttccac agttctcgtc atcagctctc tggttgcttt agctaataca 1381 ccataagcat tttccctact gatgttcatc atctgagcgt attggttata agtgaacgat 1441 accgtccgtt ctttccttgt agggttttca atcgtggggt tgagtagtgc cacacagcat 1501 aaaattagct tggtttcatg ctccgttaag tcatagcgac taatcgctag ttcatttgct 1561 ttgaaaacaa ctaattcaga catacatctc aattggtcta ggtgatttta atcactatac 1621 caattgagat gggctagtca atgataatta ctagtccttt tcctttgagt tgtgggtatc 1681 tgtaaattct gctagacctt tgctggaaaa cttgtaaatt ctgctagacc ctctgtaaat 1741 tccgctagac ctttgtgtgt tttttttgtt tatattcaag tggttataat ttatagaata 1801 aagaaagaat aaaaaaagat aaaaagaata gatcccagcc ctgtgtataa ctcactactt 1861 tagtcagttc cgcagtatta caaaaggatg tcgcaaacgc tgtttgctcc tctacaaaac 1921 agaccttaaa accctaaagg cttaagtagc accctcgcaa gctcgggcaa atcgctgaat 1981 attccttttg tctccgacca tcaggcacct gagtcgctgt ctttttcgtg acattcagtt 2041 cgctgcgctc acggctctgg cagtgaatgg gggtaaatgg cactacaggc gccttttatg 2101 gattcatgca aggaaactac ccataataca agaaaagccc gtcacgggct tctcagggcg 2161 ttttatggcg ggtctgctat gtggtgctat ctgacttttt gctgttcagc agttcctgcc 2221 ctctgatttt ccagtctgac cacttcggat tatcccgtga caggtcattc agactggcta 2281 atgcacccag taaggcagcg gtatcatcaa caggcttacc cgtcttactg tccctagtgc 2341 ttggattctc accaataaaa aacgcccggc ggcaaccgag cgttctgaac aaatccagat 2401 ggagttctga ggtcattact ggatctatca acaggagtcc aagcgagctc tcgaacccca 2461 gagtcccgct cagaagaact cgtcaagaag gcgatagaag gcgatgcgct gcgaatcggg 2521 agcggcgata ccgtaaagca cgaggaagcg gtcagcccat tcgccgccaa gctcttcagc 2581 aatatcacgg gtagccaacg ctatgtcctg atagcggtcc gccacaccca gccggccaca 2641 gtcgatgaat ccagaaaagc ggccattttc caccatgata ttcggcaagc aggcatcgcc 2701 atgggtcacg acgagatcct cgccgtcggg catgcgcgcc ttgagcctgg cgaacagttc 2761 ggctggcgcg agcccctgat gctcttcgtc cagatcatcc tgatcgacaa gaccggcttc 2821 catccgagta cgtgctcgct cgatgcgatg tttcgcttgg tggtcgaatg ggcaggtagc 2881 cggatcaagc gtatgcagcc gccgcattgc atcagccatg atggatactt tctcggcagg 2941 agcaaggtga gatgacagga gatcctgccc cggcacttcg cccaatagca gccagtccct 3001 tcccgcttca gtgacaacgt cgagcacagc tgcgcaagga acgcccgtcg tggccagcca 3061 cgatagccgc gctgcctcgt cctgcagttc attcagggca ccggacaggt cggtcttgac 3121 aaaaagaacc gggcgcccct gcgctgacag ccggaacacg gcggcatcag agcagccgat 3181 tgtctgttgt gcccagtcat agccgaatag cctctccacc caagcggccg gagaacctgc 3241 gtgcaatcca tcttgttcaa tcatgcgaaa cgatcctcat cctgtctctt gatcagatct 3301 tgatcccctg cgccatcaga tccttggcgg caagaaagcc atccagttta ctttgcaggg 3361 cttcccaacc ttaccagagg gcgccccagc tggcaattcc gacgtcaccg gtaggcatca 3421 aataaaacga aaggctcagt cgaaagactg ggcctttcgt tttatctgtt gtttgtcggt 3481 gaacgctctc ctgagtagga caaatccgcc gggagcggat ttgaacgttg cgaagcaacg 3541 gcccggaggg tggcgggcag gacgcccgcc ataaactgcc aggcatcaaa ttaagcagaa 3601 ggccatcctg acggatggcc tttttgcgtt tctacaaact cttttgttta tttttctaaa 3661 tacattcaaa tatgtatccg ctcatgacat taacctataa aaataggcgt atcacgaggc 3721 cctttcgtct tcaaacgcgt gtacacccgg gcggccgcgt gcactccgga ggcgcgccga 3781 attctttaca ctttatgctt ccggctcgta tgttgtgtcg accgagcgga taacaatttc 3841 acacaggaaa cagctatgac agagcagaaa gccctagtaa agcgtattac aaatgaaacc 3901 aagattcaga ttgcgatctc tttaaagggt ggtcccctag cgatagagca ctcgatcttc 3961 ccagaaaaag aggcagaagc agtagcagaa caggccacac aatcgcaagt gattaacgtc 4021 cacacaggta tagggtttct ggaccatatg atacatgctc tggccaagca ttccggctgg 4081 tcgctaatcg ttgagtgcat tggtgactta cacatagacg accatcacac cactgaagac 4141 tgcgggattg ctctcggtca agcttttaaa gaggccctag gggccgtgcg tggagtaaaa 4201 aggtttggat caggatttgc gcctttggat gaggcacttt ccagagcggt ggtagatctt 4261 tcgaacaggc cgtacgcagt tgtcgaactt ggtttgcaaa gggagaaagt aggagatctc 4321 tcttgcgaga tgatcccgca ttttcttgaa agctttgcag aggctagcag aattaccctc 4381 cacgttgatt gtctgcgagg caagaatgat catcaccgta gtgagagtgc gttcaaggct 4441 cttgcggttg ccataagaga agccacctcg cccaatggta ccaacgatgt tccctccacc 4501 aaaggtgttc ttatgtagtg acaccgatta tttaaagctg cagggatccc acacaggaaa 4561 cagctatgtc gaaagctaca tataaggaac gtgctgctac tcatcctagt cctgttgctg 4621 ccaagctatt taatatcatg cacgaaaagc aaacaaactt gtgtgcttca ttggatgttc 4681 gtaccaccaa ggaattactg gagttagttg aagcattagg tcccaaaatt tgtttactaa 4741 aaacacatgt ggatatcttg actgattttt ccatggaggg cacagttaag ccgctaaagg 4801 cattatccgc caagtacaat tttttactct tcgaagacag aaaatttgct gacattggta 4861 atacagtcaa attgcagtac tctgcgggtg tatacagaat agcagaatgg gcagacatta 4921 cgaatgcaca cggtgtggtg ggcccaggta ttgttagcgg tttgaagcag gcggcggaag 4981 aagtaacaaa ggaacctaga ggccttttga tgttagcaga attgtcatgc aagggctccc 5041 tagctactgg agaatatact aagggtactg ttgacattgc gaagagcgac aaagattttg 5101 ttatcggctt tattgctcaa agagacatgg gtggaagaga tgaaggttac gattggttga 5161 ttatgacacc cggtgtgggt ttagatgaca agggagacgc attgggtcaa cagtatagaa 5221 ccgtggatga tgtggtctct acaggatctg acattattat tgttggaaga ggactatttg 5281 caaagggaag ggatgctaag gtagagggtg aacgttacag aaaagcaggc tgggaagcat 5341 atttgagaag atgcggccag caaaactaac tcgagctaaa ttgtaagcgt taatattttg 5401 ttaaaattcg cgttaaattt ttgttaaatc agctcatttt ttaaccaata ggccgaaatc 5461 ggcaaaatcc cttataaatc aaaagaatag accgagatag ggttgagtgt tgttccagtt 5521 tggaacaaga gtccactatt aaagaacgtg gactccaacg tcaaagggcg aaaaaccgtc 5581 tatcagggcg atggcccact acgtgaacca tcaccctaat caagtttttt ggggtcgagg 5641 tgccgtaaag cactaaatcg gaaccctaaa gggagccccc gatttagagc ttgacgggga 5701 aagccggcga acgtggcgag aaaggaaggg aagaaagcga aaggagcggg cgctagggcg 5761 ctggcaagtg tagcggtcac gctgcgcgta accaccacac ccgccgcgct taatgcgccg 5821 ctacagggcg cgtc //
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