质粒名称: | pCfB8644 |
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出品公司: | Addgene |
目录编号: | 126919 |
存储实验室: | Irina Borodina |
载体骨架基本信息 |
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载体名称: | pCfB6682 |
载体出品公司: | Clontech |
完整质粒大小: | 10708bp |
载体类型: | 酵母表达 |
载体抗性: | 氨苄霉素 |
生长温度: | 37 ℃ |
宿主菌: | DH5a |
拷贝数: | 高拷贝 |
插入基因信息 |
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插入基因名称: | XdCrtI and HMG1 |
物种来源: | Xanthophyllomyces dendrorhous and Yarrowia lipolytica |
克隆方法: | 未知 |
文献引用方法 |
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材料和方法部分: | pCfB8644 was a gift from Irina Borodina (Addgene plasmid # 126919 ; http://n2t.net/addgene:126919 ; RRID:Addgene_126919) |
参考文献部分: | A teaching protocol demonstrating the use of EasyClone and CRISPR/Cas9 for metabolic engineering of Saccharomyces cerevisiae and Yarrowia lipolytica. Milne N, Tramontin LRR, Borodina I. FEMS Yeast Res. 2019 Sep 26. pii: foz062. doi: 10.1093/femsyr/foz062. 10.1093/femsyr/foz062 PubMed 31556952 |
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载体基本信息
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载体简介
载体序列
LOCUS pCfB8644 10708 bp ds-DNA circular SYN 12-MAY-2021 DEFINITION Plasmid containing integration cassette at IntC2 integration site in Yarrowia lipolytica for overexpression of XdCrtI and XdCrtYB. ACCESSION . VERSION . KEYWORDS pCfB8644 SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 10708) AUTHORS Milne N, Tramontin LRR, Borodina I TITLE A teaching protocol demonstrating the use of EasyClone and CRISPR/Cas9 for metabolic engineering of Saccharomyces cerevisiae and Yarrowia lipolytica. JOURNAL FEMS Yeast Res. 2019 Sep 26. pii: foz062. doi: 10.1093/femsyr/foz062. PUBMED 31556952 REFERENCE 2 (bases 1 to 10708) AUTHORS . TITLE Direct Submission JOURNAL Exported May 12, 2021 from SnapGene Server 1.1.58 http://www.biofeng.com FEATURES Location/Qualifiers source 1..10708 /organism="synthetic DNA construct" /mol_type="other DNA" protein_bind 1..34 /label=FRT (minimal) /bound_moiety="FLP recombinase from the Saccharomyces cerevisiae 2u plasmid" /note="supports FLP-mediated excision but not integration (Turan and Bode, 2011)" protein_bind complement(7965..7998) /label=FRT (minimal) /bound_moiety="FLP recombinase from the Saccharomyces cerevisiae 2u plasmid" /note="supports FLP-mediated excision but not integration (Turan and Bode, 2011)" primer_bind complement(8468..8485) /label=M13 Forward /note="In lacZ gene. Also called M13-F20 or M13 (-21) Forward" primer_bind complement(8468..8484) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" primer_bind complement(8583..8600) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(8754..9342) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(8834..8853) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(9464..10324) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 10087..10106 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(10325..10416) /gene="bla" /label=AmpR promoter primer_bind 10458..10477 /label=Kan-R /note="Kanamycin resistance gene, reverse primer" primer_bind 10483..10502 /label=pENTR-R /note="pENTR vectors, reverse primer" ORIGIN 1 gaagttccta ttctctagaa agtataggaa cttctgaagt ggggatttaa atgcggccgc 61 gaatgcacgc gatgattgaa acgcctgaca aaaacgcctg ataaaaacgc ctgataaaaa 121 cgcctgataa aaacgcctga taaaaacgcc tgtcaaaacc aaccagacct cggtagagag 181 gatcagagtc ccatggtgta ctatacagtg aaactgctgt gcgaatggta taccattgct 241 gtctatatag cctctagagt ggcactaatc cacaaggaca cagcacaatg tactacaggg 301 tagtactcac cccacagatg ctcttcgatg aaatagacag agaatgactg ggccagtacc 361 attgccaact tgtagggaat cgtcactctc caattccagc tccagttcca gttccagctc 421 tttcggctta attctagctc tcatttcggc atcttcattc agctgttcag gttcctgaca 481 ctgctcaatt cggcgatctc gacgactgca tcctgacttc agtctcgacc ctataattgt 541 gggctgcaca ctcggaggta taggccactc agatgcattc ttgggcggtc tataccagct 601 cattgaccct tcgtgggtct caatgttcaa cgcagatgaa cttcaaatgc ttatcagtgg 661 aggacatgcc aatgtggacg tctgggattt gaagacacac accaattacg gaggctatct 721 ggatacagat caaactataa aggacttctg gactgtgttt gagagtttcg aggaagagga 781 caagcggctg cttcttaagt ttgtgacatc agtatccaag gcaccattgc aaggattcaa 841 ggctttgaac ccgtcatttg ccattcgtaa cgctggtaga caggttgatc ggttccctac 901 ggcctccacc tgtgtcaatc ttctcaagct gcctgactat caggacattg atcaacttcg 961 gaagaaactt ttgtatgcca ttcgatcgca tgctggtttc gatttgtctt agaggaacgc 1021 atatacagta atcatagaga ataaacgata ttcatttatt aaagtagata gttgaggtag 1081 aagttgtaaa gagtgataaa tagcttagat accacagaca ccctcggtga cgaagtactg 1141 cagatggttt ccaatcacat tgacctgctg gagcagagtg ttaccggcag agcactgttt 1201 attgctctgg ccctggcaca tgacaacgtt ggagagagga gggtggatca ggggccagtc 1261 aataaagacc tcaccagagc agtgctggta accgtcccag aagggcactt gagggacgat 1321 atctcctcgg tgggtgattc ggtagagctt tcggtctttg gacaccttgg agacatcggg 1381 gttctcctgg ccaaagaaga gtttatcgac ccagttagca aagccagcgt taccgacaat 1441 gggctgacca agagtaacaa cgaggggatc gtggccgtta accttgaggt tgattccgaa 1501 cagaaggaat gcacgcgatt tactgccctt cccatccgct catgaccaca ctcaagactt 1561 tccgtactct cctccatccg gcaactgtcc ttctctctcc gacgtctcct ttccaaacga 1621 ctttgatctc tcggccgatc agtaggtagc tcgcgcaagc cgctcgcatt cccgcttgaa 1681 cctcggtagg aagtcggtca attcccttat aagaatgttt ggcaagatcc tctgcgtagg 1741 cgactaatgg aagcgagtac gtcttccatt cgaaccggaa gctttctgag gcgtttgaag 1801 atggtaatgt ggacgaagga gatagactga ggagtttgtc gaaatcttga ggccgaggtt 1861 ccgtccaatc agtcgggatc gcaagctttg attcatcccg aagaccaaag aatgagagtg 1921 gtaggtaaaa tctcccttct gttgcgtccc ctttaatgtc cctagcaatg ttcaccaact 1981 gaagggcagt tcccatctct cggcttgcca ctaacacagc ttctctttct tctatggtgg 2041 cagggacctg acttggtgca cttgcccaag agacatagac caatagctcg gcgactgagc 2101 ctgctacaca tagaccatag tccagcaagt cagctgtggt ctcgataggc gtcttccgag 2161 cctggactgc ctctgtcgat aagggaaaga taagatcagt ggtgtatcct ctaaggagtt 2221 cgtcgagtgg gtatcgaggg atcagccctt gcaacttagc gagcaacctg aaggcgaaat 2281 ggtattgaac gggaaccctt tcggtaagga attgaacgag ctcggcaggc gagagcgaag 2341 gaggaggcgg gaggggatac attcccgtgg gtcgggaagg gtgcgaagga ggaagtaaag 2401 gcgaagaaag gatcttgtca ggttgcgaag ggtgtagcgg gggcccaaat agtagggtaa 2461 gaaaatcgga gaccatgtca attgtggcat gcgggttgga agatacttca ggagagtcga 2521 taagatcatc agtcacccgg cagaatgcgt atagtccaac cagcctctcc ctaacttcgc 2581 taggaaatcc agccgaggca acaaaaaagc tccggctctt tttctccaac aacttgactg 2641 ccagttccaa gtcacgtttt ggctgagaag agtatggtcg gctgctaaaa aacagggaga 2701 gcacaggcgg tgtaatgagg ggaaatgaag atggcatctt tttgttgcca taaatagttc 2761 gaccgtgtag caggtatagg gcctgagtat gatcgcaggc agacagaccc agaacaatca 2821 ttagattcgt cagtaagaag aacatagctt cctcaatggg tagtacacct ccaagcctcc 2881 accctacaat cttctcatcg ttgatcgacc aagagtcttg accgacagca acataatcta 2941 cccaaatcag atacaccgtc gggatcatga ttgttgcaat agttgacttt gctcggccac 3001 ttttccaatc gaaagcatat tcgcctgata atgctgccaa gagcatggta ggtggggtga 3061 tgagtaagga gagtgcccgc atgtagaagt agtgatctgt cacgagcggg tcgggcgatg 3121 ggctggggtg agcggtaaat aggtagataa tgggcagagg gatgagcgcc ttgagcgcga 3181 gagaaagggc ggacgatcta gtcttgggaa gcgcgagaga tgggagaagg tgcctagttg 3241 ccaagacgta gaccaagccg gtgattacgg tttgaatgac aaagaaagcg tactcttcat 3301 atggaacatc tagaaacgtt ccaaacacgc cttggccact ctccgctgat ggatatgtcc 3361 atgcgccatt tctgatgatc catgagtccc atggtgtggt tgcactaaac gcaataaata 3421 cgaggatcga tattttgtag atgtcaaatt ttgtcaaaat cggggaagtg agcaggccga 3481 gaagaccaag aattgggaga gtatagatca gatggatctg gtaatatgcg agagccgtca 3541 tatgacagat tgtgtgatgt gtagtttaga tttcgaatct gtggggaaag aaaggaaaaa 3601 agagactggc aaccgattgg gagagccact gtttatatat accctagaca agccccccgc 3661 ttgtaagatg ttggtcaatg taaaccagta ttaaggttgg caagtgcagg agaagcaagg 3721 tgtgggtacc gagcaatgga aatgtgcgga aggcaaaaaa atgaggccac ggcctattgt 3781 cggggctata tccagggggc gattgaagta cactaacatg acatgtgtcc acagaccctc 3841 aatctggcct gatgagccaa atccatacgc gctttcgcag ctctaaaggc tataacaagt 3901 cacaccaccc tgctcgacct cagcgccttc actttttgct aagacaaact gtacacgctg 3961 ttccagcgtt ttctgcctgc acctggtggg acatttggtg caacctaaag tgctcggaac 4021 ctctgtggtg tccagatcag cgcagcagtt ccgaggtagt tttgaggccc ttagatgatg 4081 caatggtgtc agtcgctgga tcacgagtct taatggcagt attcgttctt atttgtgcca 4141 ttgagccccg ttatcctcgt atcttctacc ccccatccca tccctttgtt ggtgcaaccc 4201 tacccattta ttgttgggtg cagcccaacc gacgtggaga gcttggcttg gccatataaa 4261 aaggcccccc cctagtggca atggcagaaa gtcagctgtg agttgttgaa tttgtcatct 4321 aggcggcctg gccgtcttct ccggggcaat tgttcctcta tagtactgcg tacactgtta 4381 tcagtagctg acgcagtagg atgtcctgca cgggtctttt tgtggggtgt ggagaaaggg 4441 gtgcttggag atggaagccg gtagaaccgg gctgcttggg gggatttggg gccgctgggc 4501 tccaaagagg ggtaggcatt tcgttggggt tacgtaattg cggcatttgg gtcctgcgcg 4561 catgtcccat tggtcagaat tagtccggat aggagactta tcagccaatc acagcgccgg 4621 atccacctgt aggttgggtt gggtgggagc acccctccac agagtagagt caaacagcag 4681 cagcaacatg atagttgggg gtgtgcgtgt taaaggaaaa aaaaagaagc ttgggttata 4741 ttcccgctct atttagaggt tgcgggatag acgccgacgg agggcaatgg cgccatggaa 4801 ccttgcggat atcgatacgc cgcggcggac tgcgtccgaa ccagctccag cagcgttttt 4861 tccgggccat tgagccgact gcgaccccgc caacgtgtct tggcccacgc actcatgtca 4921 tgttggtgtt gggaggccac tttttaagta gcacaaggca cctagctcgc agcaaggtgt 4981 ccgaaccaaa gaagcggctg cagtggtgca aacggggcgg aaacggcggg aaaaagccac 5041 gggggcacga attgaggcac gccctcgaat ttgagacgag tcacggcccc attcgcccgc 5101 gcaatggctc gccaacgccc ggtcttttgc accacatcag gttaccccaa gccaaacctt 5161 tgtgttaaaa agcttaacat attataccga acgtaggttt gggcgggctt gctccgtctg 5221 tccaaggcaa catttatata agggtctgca tcgccggctc aattgaatct tttttcttct 5281 tctcttctct atattcattc ttgaattaaa cacacatcaa cagtgcaggt atgggaaaag 5341 aacaagatca ggataaaccc acagctatca tcgtgggatg tggtatcggt ggaatcgcca 5401 ctgccgctcg tcttgctaaa gaaggtttcc aggtcacggt gttcgagaag aacgactact 5461 ccggaggtcg atgctcttta atcgagcgag atggttatcg attcgatcag gggcccagtt 5521 tgctgctctt gccagatctc ttcaagcaga cattcgaaga tttgggggag aagatggaag 5581 attgggtcga tctcatcaag tgtgaaccca actatgtttg ccacttccac gatgaagaga 5641 ctttcacttt ttcaaccgac atggcgttgc tcaagcggga agtcgagcgt tttgaaggca 5701 aagatggatt tgatcggttc ttgtcgttta tccaagaagc ccacagacat tacgagcttg 5761 ctgtcgttca cgtcctgcag aagaacttcc ctggcttcgc agcattctta cggctacagt 5821 tcattggcca aatcctggct cttcacccct tcgagtctat ctggacaaga gtttgtcgat 5881 atttcaagac cgacagatta cgaagagtct tctcgtttgc agtgatgtac atgggtcaaa 5941 gcccatacag tgcgcccgga acatattcct tgctccaata caccgaattg accgagggca 6001 tctggtatcc gagaggaggc ttttggcagg ttcctaatac tcttcttcag atcgtcaagc 6061 gcaacaatcc ctcagccaag ttcaatttca acgctccagt ttcccaggtt cttctctctc 6121 ctgccaagga ccgagcgact ggtgttcgac ttgaatccgg cgaggaacat cacgccgatg 6181 ttgtgattgt caatgctgac ctcgtttacg cctccgagca cttgattcct gacgatgcca 6241 gaaacaagat tggccaactg ggtgaagtca agagaagttg gtgggctgac ttagttggtg 6301 gaaagaagct caagggaagt tgcagtagtt tgagcttcta ctggagcatg gaccgaatcg 6361 tggacggtct gggcggacac aatatcttct tggccgagga cttcaaggga tcattcgaca 6421 caatcttcga ggagttgggt ctcccagccg atccttcctt ttacgtgaac gttccctcgc 6481 gaatcgatcc ttctgccgct cccgaaggca aagatgctat cgtcattctt gtgccgtgtg 6541 gccatatcga cgcttcgaac cctcaagatt acaacaagct tgttgctcgg gcaaggaagt 6601 ttgtgatcca aacgctttcc gccaagcttg gacttcccga ctttgaaaaa atgattgtgg 6661 cagagaaggt tcacgatgct ccctcttggg agaaagaatt taacctcaag gacggaagca 6721 tcttgggact ggctcacaac tttatgcaag ttcttggttt caggccgagc accagacatc 6781 ccaagtatga caagttgttc tttgtcgggg cttcgactca tcccggaact ggggttccca 6841 tcgtcttggc tggagccaag ttaactgcca accaagttct cgaatccttt gaccgatccc 6901 cagctccaga tcccaatatg tcactctccg taccatatgg aaaacctctc aaatcaaatg 6961 gaacgggtat cgattctcag gtccagctga agttcatgga tttggagaga tgggtatacc 7021 ttttggtgtt gttgattggg gccgtgatcg ctcgatccgt tggtgttctt gctttctgaa 7081 tcgcacgcat tccgttgaag tgtggatggg gaagtgagtg cccggttctg tgtgcacaat 7141 tggcaatcca agatggatgg attcaacaca gggatatagc gagctacgtg gtggtgcgag 7201 gatatagcaa cggatattta tgtttgacac ttgagaatgt acgatacaag cattgtccaa 7261 gtacaatact aaacatactg tacatactca tactcgtacc cgggcaacgg tttcacttga 7321 gtgcagtggc tagtgccctt actcgtacag tgtgcaatac tgcgtatcat agtctttgat 7381 gtatatcgta ttcattcatg ttagttgcgt aagcgttgca cgtttccatc taagacctac 7441 atttgtctgt tagctttgtg tagtcttaga cggcttgtag cagtccggag cgagattgtg 7501 tttctcgttg accataagct gaacactgct gtttccagcc tcagaagcgc agtcctcgta 7561 tcgtttctgc tgctgcggtt gttgttgttg ttgttgttgt tgttgttgtt ggatgtcgtc 7621 cttcgcgtct ctggcccatc accaaggtgg aaggtggatc ttcgtcttca cgaagttggt 7681 acttgttggc aaacatctca ttgaccatat cccacatcac cctggggcct gtgttcgaag 7741 gatagagcgg gtgcgcaacc acccagagaa gcattcaaaa caatacctac aagttgatct 7801 ctttcggtgt ctccagatac ccatctccac aagtgagctt tctccacgaa tcgtccattg 7861 acacctgtcc agaaacacca accggtattt caatgagtcg ccgagtgttc aggtcgtcga 7921 attatcgcac gcattcgcgg ccgcaaattt aaataaaatg aagtgaagtt cctatacttt 7981 ctagagaata ggaacttcta tagtgagtcg aataagggcg acacaaaatt tattctaaat 8041 gcataataaa tactgataac atcttatagt ttgtattata ttttgtatta tcgttgacat 8101 gtataatttt gatatcaaaa actgattttc cctttattat tttcgagatt tattttctta 8161 attctcttta acaaactaga aatattgtat atacaaaaaa tcataaataa tagatgaata 8221 gtttaattat aggtgttcat caatcgaaaa agcaacgtat cttatttaaa gtgcgttgct 8281 tttttctcat ttataaggtt aaataattct catatatcaa gcaaagtgac aggcgccctt 8341 aaatattctg acaaatgctc tttccctaaa ctccccccat aaaaaaaccc gccgaagcgg 8401 gtttttacgt tatttgcgga ttaacgatta ctcgttatca gaaccgccca gggggcccga 8461 gcttaagact ggccgtcgtt ttacaacaca gaaagagttt gtagaaacgc aaaaaggcca 8521 tccgtcaggg gccttctgct tagtttgatg cctggcagtt ccctactctc gccttccgct 8581 tcctcgctca ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt atcagctcac 8641 tcaaaggcgg taatacggtt atccacagaa tcaggggata acgcaggaaa gaacatgtga 8701 gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc gtttttccat 8761 aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag gtggcgaaac 8821 ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt gcgctctcct 8881 gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg 8941 ctttctcata gctcacgctg taggtatctc agttcggtgt aggtcgttcg ctccaagctg 9001 ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg taactatcgt 9061 cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac tggtaacagg 9121 attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg ggctaactac 9181 ggctacacta gaagaacagt atttggtatc tgcgctctgc tgaagccagt taccttcgga 9241 aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg tggttttttt 9301 gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt 9361 tctacggggt ctgacgctca gtggaacgac gcgcgcgtaa ctcacgttaa gggattttgg 9421 tcatgagctt gcgccgtccc gtcaagtcag cgtaatgctc tgcttaccaa tgcttaatca 9481 gtgaggcacc tatctcagcg atctgtctat ttcgttcatc catagttgcc tgactccccg 9541 tcgtgtagat aactacgata cgggagggct taccatctgg ccccagcgct gcgatgatac 9601 cgcgagaacc acgctcaccg gctccggatt tatcagcaat aaaccagcca gccggaaggg 9661 ccgagcgcag aagtggtcct gcaactttat ccgcctccat ccagtctatt aattgttgcc 9721 gggaagctag agtaagtagt tcgccagtta atagtttgcg caacgttgtt gccatcgcta 9781 caggcatcgt ggtgtcacgc tcgtcgtttg gtatggcttc attcagctcc ggttcccaac 9841 gatcaaggcg agttacatga tcccccatgt tgtgcaaaaa agcggttagc tccttcggtc 9901 ctccgatcgt tgtcagaagt aagttggccg cagtgttatc actcatggtt atggcagcac 9961 tgcataattc tcttactgtc atgccatccg taagatgctt ttctgtgact ggtgagtact 10021 caaccaagtc attctgagaa tagtgtatgc ggcgaccgag ttgctcttgc ccggcgtcaa 10081 tacgggataa taccgcgcca catagcagaa ctttaaaagt gctcatcatt ggaaaacgtt 10141 cttcggggcg aaaactctca aggatcttac cgctgttgag atccagttcg atgtaaccca 10201 ctcgtgcacc caactgatct tcagcatctt ttactttcac cagcgtttct gggtgagcaa 10261 aaacaggaag gcaaaatgcc gcaaaaaagg gaataagggc gacacggaaa tgttgaatac 10321 tcatattctt cctttttcaa tattattgaa gcatttatca gggttattgt ctcatgagcg 10381 gatacatatt tgaatgtatt tagaaaaata aacaaatagg ggtcagtgtt acaaccaatt 10441 aaccaattct gaacattatc gcgagcccat ttatacctga atatggctca taacacccct 10501 tgtttgcctg gcggcagtag cgcggtggtc ccacctgacc ccatgccgaa ctcagaagtg 10561 aaacgccgta gcgccgatgg tagtgtgggg actccccatg cgagagtagg gaactgccag 10621 gcatcaaata aaacgaaagg ctcagtcgaa agactgggcc tttcgcccgg gctaattatg 10681 gggtgtcgcc cttattcgac tctatagt //
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